BAC Information

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BAC

Clone NameB6Ng01-283A10
Chromosome2 (Build37)6 (Build37)
Map Location 127,772,165 - 127,773,29418,834,350 - 18,834,597
singlet/doubletsingletsinglet
Overlap geneAcoxl
Upstream geneAp4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1
Downstream geneBcl2l11, LOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283A10.bB6Ng01-283A10.g
ACCGA082090GA082091
length1,122981
definitionB6Ng01-283A10.b B6Ng01-283A10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(127,772,165 - 127,773,294)(18,834,350 - 18,834,597)
sequence
gaattctgtggttcagcctccactagcctttcagaatctttttgaaatgc
atccacccaggctgtcaccttgagttttgttctttggcatcccatgactt
acataatttccagcaccctaagatcttacacataaactcaagcgaccttg
taggattttatttccaggctgtattcctgtgaagcagatggattgatttt
gtcacaggcataatacattgttaattttggaaatggtttttgtaaagaaa
acaagctgggttattttctttttaattttcaattatgtgcaaggatatgt
catcagtataaagaaatcaaatgggcttttcacaactcagaaggcagtgt
tgtccctctgggatggctgacttagggttttattgttgtaaagagacgct
gtgaccaaggcaagtcttataaaggacaacatttaattggggctggctta
caattacagaggttcaattccttatcatcatggcagaaagtatggcaaca
tccaggctgaagaaggagctgagagttctatatcttgatccaaaagaaac
caaggggaaaactgtcctcaggcaactaagaggaggatctcaaagcccac
tcccaccatgacacagttcctccaacaaggccatacctcctaatagtgcc
actccctgtgccaagcatattcaaaccaccacaatggcccaggaaggaac
tggagtcagaaaagagataggcagacaaagcatggtagtgaaatgtggga
agaaatggacaaccatctcatagtgaaattctggaacatgttcagatgtg
tcagacactgtagatatccacctgtgcttgagggtggaaagctagtggtg
ggtacttgggccaaatccagcagagggtacttttcattggcgtgttctag
acttaacagcagagatgttcaaccaacacctgacacccacaccttgaaca
tcactgaggccagcaactgggtaaccagcaagtttaaaggatttgggttt
atgaggagggatggttattgcaatagagagtcagttaaagaaaaaggaaa
ttcccaagagagtattccccgagctttatatctgttgtcaatagtcagta
ggttgcctttcacttatatttc
gaattcctgatctttccaagacttttatcatgaatcggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcgtttagcaagaattttattgagtatttttac
aagaattaaccaaatgaggagttggttctttgagaaaatcaacaagatag
ataaacccttagctagactcactagagggcacagggacaaaatcctaatt
aacaaaatcagaaatgaaaagggagacataacaacagatcctgaagaaat
ccaaaacaccatcagatccttctacaaaaggccatactcaacaaaactgg
aaaacctggacgaaatggacaaatttctggacagataccaggtaccaagg
ttgaatcaggatcaagttaacgatctaaacagtcccatattccctaaaga
aatagaagcagttattaatagtctcccagccaaaaaaagcccaggaccag
acgggtttagtgcagagttctatcagaccttcaaagaagatctaattcca
gttctgcacaaactatttcacaaaatagaagtagaaggtactctacccaa
ctcattttatgaagccacaattactctgatacctaaaccacagaaagatc
caacaaagatagagaacttcaggccaatttctcttatgaatatcgatgca
aaaatactctctttcctttcaacttgggccttgaggtgtggcagaggtca
acctgcatgagctttcttaaatcactctttcccagtggtttcctgtaccc
tctaaagtagaggcactgtcttagggtttctattgctgccacaaacacca
taccagaagcaagttgaagcggaaagggtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127772165_127773294
seq2: B6Ng01-283A10.b_43_1164

seq1  GAATTCTGTGGTTCAGCCTCCACTAGCCTTTCAGAATCTTTTTGAAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGTTCAGCCTCCACTAGCCTTTCAGAATCTTTTTGAAATGC  50

seq1  ATCCACCCAGGCTGTCACCTTGAGTTTTGTTCTTTGGCATCCCATGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCAGGCTGTCACCTTGAGTTTTGTTCTTTGGCATCCCATGACTT  100

seq1  ACATAATTTCCAGCACCCTAAGATCTTACACATAAACTCAAGCGACCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTTCCAGCACCCTAAGATCTTACACATAAACTCAAGCGACCTTG  150

seq1  TAGGATTTTATTTCCAGGCTGTATTCCTGTGAAGCAGATGGATTGATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTTTATTTCCAGGCTGTATTCCTGTGAAGCAGATGGATTGATTTT  200

seq1  GTCACAGGCATAATACATTGTTAATTTTGGAAATGGTTTTTGTAAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGGCATAATACATTGTTAATTTTGGAAATGGTTTTTGTAAAGAAA  250

seq1  ACAAGCTGGGTTATTTTCTTTTTAATTTTCAATTATGTGCAAGGATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGGGTTATTTTCTTTTTAATTTTCAATTATGTGCAAGGATATGT  300

seq1  CATCAGTATAAAGAAATCAAATGGGCTTTTCACAACTCAGAAGGCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTATAAAGAAATCAAATGGGCTTTTCACAACTCAGAAGGCAGTGT  350

seq1  TGTCCCTCTGGGATGGCTGACTTAGGGTTTTATTGTTGTAAAGAGACGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCTGGGATGGCTGACTTAGGGTTTTATTGTTGTAAAGAGACGCT  400

seq1  GTGACCAAGGCAAGTCTTATAAAGGACAACATTTAATTGGGGCTGGCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAAGGCAAGTCTTATAAAGGACAACATTTAATTGGGGCTGGCTTA  450

seq1  CAATTACAGAGGTTCAATTCCTTATCATCATGGCAGAAAGTATGGCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACAGAGGTTCAATTCCTTATCATCATGGCAGAAAGTATGGCAACA  500

seq1  TCCAGGCTGAAGAAGGAGCTGAGAGTTCTATATCTTGATCCAAAAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCTGAAGAAGGAGCTGAGAGTTCTATATCTTGATCCAAAAGAAAC  550

seq1  CAAGGGGAAAACTGTCCTCAGGCAACTAAGAGGAGGATCTCAAAGCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGAAAACTGTCCTCAGGCAACTAAGAGGAGGATCTCAAAGCCCAC  600

seq1  TCCCACCATGACACAGTTCCTCCAACAAGGCCATACCTCCTAATAGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCATGACACAGTTCCTCCAACAAGGCCATACCTCCTAATAGTGCC  650

seq1  ACTCCCTGTGCCAAGCATATTCAAACCACCACAATGGCCCAGGAAGGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTGTGCCAAGCATATTCAAACCACCACAATGGCCCAGGAAGGAAC  700

seq1  TGGAGTCAGAAAAGAGATAGGCAGACAAAGCATGGTAGTGAAATGTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCAGAAAAGAGATAGGCAGACAAAGCATGGTAGTGAAATGTGGGA  750

seq1  AGAAATGGACAACCATCTCATAGTGAAATTCTGGAACATGTTCAGATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGACAACCATCTCATAGTGAAATTCTGGAACATGTTCAGATGTG  800

seq1  TCAGACACTGTAGATATCCACCTGTGCTTGAGGGTGGAAAGCTAGTGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACTGTAGATATCCACCTGTGCTTGAGGGTGGAAAGCTAGTGGTG  850

seq1  GGTACTTGGGCCAAATCCAGCAGAGGGTACTTTTCATTGGCGTGTTCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTGGGCCAAATCCAGCAGAGGGTACTTTTCATTGGCGTGTTCTAG  900

seq1  ACTTAACAGCAGAGATGTTCAACCAACACCTGACACCCACACCTTGAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACAGCAGAGATGTTCAACCAACACCTGACACCCACACCTTGAACA  950

seq1  TCACTGAGGCCAGCAACTGGGTAACCAGCAAGTTTTAAAGGATTTGGTTT  1000
      |||||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  TCACTGAGGCCAGCAACTGGGTAACCAGCAAG-TTTAAAGGATTTGGGTT  999

seq1  TATTGAGAGGGATGGTTATTGCAATAGAGAGTCAGTTAAAGAAAAAGGAA  1050
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGAGGGATGGTTATTGCAATAGAGAGTCAGTTAAAGAAAAAGGAA  1049

seq1  ATTTCCCAAAGAGAAGTATTCCCCGAAGCTTTATATTCTGTTGTCAATAG  1100
      |||  || ||||| ||||||||||| ||||||||| ||||||||||||||
seq2  ATT--CCCAAGAG-AGTATTCCCCG-AGCTTTATA-TCTGTTGTCAATAG  1094

seq1  TCCAGTAAGGTTG-CTTTCACTTATTATTTC  1130
      | |||| |||||| |||||||||| ||||||
seq2  T-CAGT-AGGTTGCCTTTCACTTA-TATTTC  1122

seq1: chr6_18834350_18834597
seq2: B6Ng01-283A10.g_63_310 (reverse)

seq1  AAAAATCCTCAATAAAATTCTTGCTAACCGAATCCAAGAACACATTAAAG  50
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAAATACTCAATAAAATTCTTGCTAAACGAATCCAAGAACACATTAAAG  50

seq1  CAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGG  100

seq1  TTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAA  150

seq1  AGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACA  200

seq1  AGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTC  248
      |||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  AGATCCAACACCGATTCATGATAAAAGTCTTGGAAAGATCAGGAATTC  248