BAC Information

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BAC

Clone NameB6Ng01-283L17
Chromosome6 (Build37)
Map Location 3,817,749 - 3,818,857
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039885, LOC100039896, LOC100040185, EG667335, Samd9l, AI987662, Ccdc132, Calcr, LOC100039942
Downstream geneTfpi2, Gngt1, Gng11, 4930528H21Rik, Bet1, LOC667381, LOC100039965, Col1a2, Casd1, Sgce, Peg10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283L17.g
ACCGA082617
length1,124
definitionB6Ng01-283L17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcatgatattcataaaaacttgtcggatagtaagaaataatca
cagtttcattcccaggattgtgggtgccatagggtggacaggtcttgacc
tcaggcagatatcttactatcggtgaatgtttgaccatctcctgatttct
accgtttatgtatcaggtgcctaattcctgtttaaaacccaccaagatct
gagagatttccaaatcctccttgctgaaatgacgctcattgaaattgaaa
tagaatgtttctgaaagaatgagacaggagaaaagtaacagcagaggact
atgatctcataaagctaaacttcatcagagaagtttatggggaaaaatag
tgtttgaacaaaagaataccacctttaaacacacatagtgagggagcagg
ccgtgcccgattgtaccgccacaaacaaggtccaaggaactttaaagaca
gtgttgtaattattgccaagaacaaagaatttctctgaagtgggaacgta
cgatataggtgccactgggtatgtggcaagatcaaagatgcaaatattgc
ttgaagcacgctgattactctgaaaacagtggataagggagaatatgagc
caacagagaggcaatgctgaggggctagtggaattttccaactactgtct
tgagctaggatgcaggataaagaaagagtaataactagaaagaaaaagct
taattttttgaaaaataaaaaattggaattagcagaggaatattgttcaa
tggaaaagataagaagtaactggcctgcccatcccacccaatgctttgta
aatccttagactggatttgggttcacttcatttgtttaataaaattttta
gctgttcttaatcctatatgatatttaaaagaaactaaatttcacaacct
ttcatacgaacatcctaaaaatagaaagttatacatcatttggaccactg
taatctctagacaaagaagctcgcctaatcttctagacaaaattaaaaaa
aggaaaccattttaatagttcacttcatgacataactttgctatttttct
agcctatgccatggtgactttaaatagtatacaaattagaaagggttgcc
accaagttgcttcttgctagaaga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_3817749_3818857
seq2: B6Ng01-283L17.g_71_1184 (reverse)

seq1  TCTTCTAAGCAGAAGCACCT--GTTGCAAACCTTTCTAATTTGTATACTA  48
      |||||||   ||||||| ||  || |||| ||||||||||||||||||||
seq2  TCTTCTAGCAAGAAGCAACTTGGTGGCAACCCTTTCTAATTTGTATACTA  50

seq1  TTTAAAAGTCA-CATGGCATAGGCTAGGAAAATAGC-AAGTTATGTCATG  96
      ||| ||||||| ||||||||||||||| |||||||| |||||||||||||
seq2  TTT-AAAGTCACCATGGCATAGGCTAGAAAAATAGCAAAGTTATGTCATG  99

seq1  AAGTGAACTATTTAAAATGTTTTCTTTTTTTAATTTTGTCTAG-AGATTA  145
      |||||||||||| |||  |||| |||||||||||||||||||| ||||||
seq2  AAGTGAACTATTAAAATGGTTTCCTTTTTTTAATTTTGTCTAGAAGATTA  149

seq1  GGCGAGCTTCTTTGTCTAGAGATTACAGTGGTCCAAATGATGTATAACTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAGCTTCTTTGTCTAGAGATTACAGTGGTCCAAATGATGTATAACTT  199

seq1  TCTATTTTTAGGATGTTCGTATGAAAGGTTGTGAAATTTAGTTTCTTTTA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTAGGATGTTCGTATGAAAGGTTGTGAAATTTAGTTTCTTTTA  249

seq1  AATATCATATAGGATTAAGAACAGCTAAAAATTTTATTAAACAAATGAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATATAGGATTAAGAACAGCTAAAAATTTTATTAAACAAATGAAG  299

seq1  TGAACCCAAATCCAGTCTAAGGATTTACAAAGCATTGGGTGGGATGGGCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAAATCCAGTCTAAGGATTTACAAAGCATTGGGTGGGATGGGCA  349

seq1  GGCCAGTTACTTCTTATCTTTTCCATTGAACAATATTCCTCTGCTAATTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTTACTTCTTATCTTTTCCATTGAACAATATTCCTCTGCTAATTC  399

seq1  CAATTTTTTATTTTTCAAAAAATTAAGCTTTTTCTTTCTAGTTATTACTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTTATTTTTCAAAAAATTAAGCTTTTTCTTTCTAGTTATTACTC  449

seq1  TTTCTTTATCCTGCATCCTAGCTCAAGACAGTAGTTGGAAAATTCCACTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATCCTGCATCCTAGCTCAAGACAGTAGTTGGAAAATTCCACTA  499

seq1  GCCCCTCAGCATTGCCTCTCTGTTTGCTCATATTCTCCCCTATCCACTGT  545
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  GCCCCTCAGCATTGCCTCTCTGTTGGCTCATATTCTCCCTTATCCACTGT  549

seq1  TTTCAGAGTAATCAGCCTGCTTCAAGCAATATTTGCATCTTTGATCTTGC  595
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTCAGAGTAATCAGCGTGCTTCAAGCAATATTTGCATCTTTGATCTTGC  599

seq1  CACATACCCACTGGTAACTATCTTGTACGTTCCCACTTCAGAGAAATTCT  645
      |||||||||| ||| | |||| | ||||||||||||||||||||||||||
seq2  CACATACCCAGTGGCACCTATATCGTACGTTCCCACTTCAGAGAAATTCT  649

seq1  TTGTTCTTGGCAATAATTACAACACTGTCTTTAAAGTTCCTTGGACCTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTGGCAATAATTACAACACTGTCTTTAAAGTTCCTTGGACCTTG  699

seq1  TTTCTGGCCTTACAATCGGGCACTGCCTGCTCCCTCACTATGTGTGTTTA  745
      ||| ||||  ||||||||||||| ||||||||||||||||||||||||||
seq2  TTTGTGGCGGTACAATCGGGCACGGCCTGCTCCCTCACTATGTGTGTTTA  749

seq1  ATGTTGGTATTCTTTTGTTCAAACACTATTTTTCCCCATAAACTTCTCTG  795
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGTATTCTTTTGTTCAAACACTATTTTTCCCCATAAACTTCTCTG  799

seq1  ATGAAGTTTAGCTTTCTGAGATCATAGTCCTCTGCTGTTACTTTTCTCCT  845
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTTAGCTTTATGAGATCATAGTCCTCTGCTGTTACTTTTCTCCT  849

seq1  GTCTCATTCTTTCTGAAACATTCTATTTCAATTTAAATTAGAGTCATTTC  895
      ||||||||||||| |||||||||||||||||||| ||| || ||||||||
seq2  GTCTCATTCTTTCAGAAACATTCTATTTCAATTTCAATGAGCGTCATTTC  899

seq1  AGCAAGGATGATTTGAAAATATTTTATATATTAGTGGGTTTTAAACAGGA  945
      |||||||| |||||| |||| | | | || || |||||||||||||||||
seq2  AGCAAGGAGGATTTGGAAATCTCTCAGATCTTGGTGGGTTTTAAACAGGA  949

seq1  ATTAGGCACCTGATACATAAAAGGTAGAAATCAGGAGATGGTCAAACATT  995
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTAGGCACCTGATACATAAACGGTAGAAATCAGGAGATGGTCAAACATT  999

seq1  CACCGATACTAAGATATCTGCCTGAGGTCAAGAACTGTCCACCCTATGGC  1045
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  CACCGATAGTAAGATATCTGCCTGAGGTCAAGACCTGTCCACCCTATGGC  1049

seq1  AACCACAATCCTGGGATTGAAACTTTGATTATTTCTTATTATCCCA-AAG  1094
      | |||||||||||||| ||||||| ||||||||||||| ||||| | |||
seq2  ACCCACAATCCTGGGAATGAAACTGTGATTATTTCTTACTATCCGACAAG  1099

seq1  TTTTTATTAATATCA  1109
      ||||||| |||||||
seq2  TTTTTATGAATATCA  1114