BAC Information

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BAC

Clone NameB6Ng01-284L10
Chromosome6 (Build37)
Map Location 126,169,236 - 126,169,971
singlet/doubletsinglet
Overlap geneLOC100043565
Upstream geneVamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf, Tmem16b, Ntf3
Downstream geneLOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L10.bB6Ng01-284L10.g
ACCGA083347GA083348
length1,215738
definitionB6Ng01-284L10.b B6Ng01-284L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaataccatctgacccctgagttgttttgtttgtttatt
tgtttgttgattggttggttgattggttggttggttggttggttgggaga
cttttaatgactgcttttatttccttggggttatgtgactgtttatctaa
tcatgttttaattttggtacctggtatctgtctagaaaaatgtccatatc
atatagatttttcaattttgttgaatataggatttgtagtaggatctgat
aatttttttttaatttcccgagtttctgttgttatgtctcccttttcatt
tctgattttgttaaattagatactgtatctgtgccctctagttagtttat
ctaagggtttatctgtcttattgattttctcaaagaaccatctcctagtg
gttttttttttcctttgaatagttctcattgtttctatttggtttatttc
agccctgaatttaattatttcctgctgtctactcctcttgggtacatttg
cttctttttgttctagagttttcagatgtgttattaagctgctagtgtaa
gtctctccaatttctttaggaagaactatgggttttcctcttagcacttg
tttcattgtgttctataagtttgggtatgctgtgccttcatttttattaa
attctaggaagtcattaatttttttacttcttccctgaccaactttatca
ttgagtagagagtttgttcagcttcccatgagtgtgtgggtttctgatgt
tattgaagaccagccttagtccatggtgatctgatagaatacatgtaatt
taaatttgatcccctcgtatctgttgaggcttgttttgtgcccgatttat
atgggtcagttttgaagaatataccatgagttgctaagaaaattgtatag
tcctttgggtttaggggtgaattgttatgtcgatctctgttcaatccatt
tgattctaacttccattagtttctgtggggcatgtgaaactgtgcaacaa
acaagctctgtcccccaatttcaaactccaggccttggaacccccgggga
acccttaagggaatggcagtatgtccacccacaaccttccctagaacccc
ttgggctccttgtccgcaagcttatatgctttcccacacagttcccatcc
cccccccactagaaaggggtgttgtggcacaattgagttacaaattaggg
cccaatgtgccctct
gaattcctactcagatttcaagatctaacttcctaatcacccctctagat
cccttgaagaataaggttcccttgttagggtccccactggcctgatgatc
tagctgagatatacattcattccattgctgggtatttactcattcattgg
ttgtctctcctctcgctcccatgccagtgcacttctgtaccttcaatcgt
aacccactcacaagcttgcagaattaccacttccaaaagacagctagagt
gggtatgggaaagggtagctgcgcataaaatggatggaatcatttcccat
catacataagctttccacgaccactggcacatttaaacacatagggggaa
agctataggaagagcagataagaggaccattatgctttctgcatagaccc
ctagctatacatgcctcccctgacacattaatgattttgaaaaggttctg
aaggagaagaggccaaggtcattgcttaaccaccagtcttgtgctggtgg
ggggaaggggaatttataaaatgtgagatgtgcaattagttagatggctg
cagaaagaccataaaaattactcatttgtcacagggaaggatttattcta
gcttatgaaaattgccttccttcagagaagaggtttgcaggggagttgca
gtaattctgccctggtctccatggataggagtggtcctctgggtgttcat
ttgaaggttctgttgggtgggggaacggcaagggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_126169236_126169971
seq2: B6Ng01-284L10.g_66_803

seq1  GAATTCCTACTCAGATTTCAAGATCTAACTTCCTAATCACCCCTCTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTCAGATTTCAAGATCTAACTTCCTAATCACCCCTCTAGAT  50

seq1  CCCTTGAAGAATAAGGTTCCCTTGTTAGGGTCCCCACTGGCCTGATGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAAGAATAAGGTTCCCTTGTTAGGGTCCCCACTGGCCTGATGATC  100

seq1  TAGCTGAGATATACATTCATTCCATTGCTGGGTATTTACTCATTCATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGATATACATTCATTCCATTGCTGGGTATTTACTCATTCATTGG  150

seq1  TTGTCTCTCCTCTCGCTCCCATGCCAGTGCACTTCTGTACCTTCAATCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTCCTCTCGCTCCCATGCCAGTGCACTTCTGTACCTTCAATCGT  200

seq1  AACCCACTCACAAGCTTGCAGAATTACCACTTCCAAAAGACAGCTAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTCACAAGCTTGCAGAATTACCACTTCCAAAAGACAGCTAGAGT  250

seq1  GGGTATGGGAAAGGGTAGCTGCGCATAAAATGGATGGAATCATTTCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGGGAAAGGGTAGCTGCGCATAAAATGGATGGAATCATTTCCCAT  300

seq1  CATACATAAGCTTTCCACGACCACTGGCACATTTAAACACATAGGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATAAGCTTTCCACGACCACTGGCACATTTAAACACATAGGGGGAA  350

seq1  AGCTATAGGAAGAGCAGATAAGAGGACCATTATGCTTTCTGCATAGACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAGGAAGAGCAGATAAGAGGACCATTATGCTTTCTGCATAGACCC  400

seq1  CTAGCTATACATGCCTCCCCTGACACATTAATGATTTTGAAAAGGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTATACATGCCTCCCCTGACACATTAATGATTTTGAAAAGGTTCTG  450

seq1  AAGGAGAAGAGGCCAAGGTCATTGCTTAACCACCAGTCTTGTGCTGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGAGGCCAAGGTCATTGCTTAACCACCAGTCTTGTGCTGGTGG  500

seq1  GGGGAAGGGGAATTTATAAAATGTGAGATGTGCAATTAGTTAGATGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGGGAATTTATAAAATGTGAGATGTGCAATTAGTTAGATGGCTG  550

seq1  CAGAAAGACCATAAAAATTACTCA-TTGTCACAGGGAAGGATTTATTCTA  599
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGAAAGACCATAAAAATTACTCATTTGTCACAGGGAAGGATTTATTCTA  600

seq1  GCTTATGAAAATTGCCTTCCTTCAGAGAAGAGGTTTGCA-GGGAGTTGCA  648
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTTATGAAAATTGCCTTCCTTCAGAGAAGAGGTTTGCAGGGGAGTTGCA  650

seq1  GTAATTCTGCCCTGGTCTCCATGGATAGGAGTGGTCCTCTGGGTGTTCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTGCCCTGGTCTCCATGGATAGGAGTGGTCCTCTGGGTGTTCAT  700

seq1  TTGAAGGTTCTGTTGGGTGGGGGAACGGCAAGGGTGGG  736
      ||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGTTCTGTTGGGTGGGGGAACGGCAAGGGTGGG  738