BAC Information

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BAC

Clone NameB6Ng01-284O15
Chromosome6 (Build37)
Map Location 58,625,669 - 58,626,696
singlet/doubletsinglet
Overlap geneAbcg2
Upstream genePigy, Lancl2, AW146242, V1rc28, LOC626582, V1rc23, V1rc24, LOC100041514, V1rc18, V1rc8, V1rc17, EG633683, LOC626649, LOC626659, LOC626672, LOC666893, LOC100041571, V1rc33, LOC626724, V1rc25, V1rc2, LOC666928, V1rc22, LOC626817, EG626828, LOC666954
Downstream geneHerc3, Nap1l5, D430015B01Rik, Tigd2, Gprin3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284O15.bB6Ng01-284O15.g
ACCGA083499GA083500
length1,1781,027
definitionB6Ng01-284O15.b B6Ng01-284O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccattttaatgggcttttttttcacctagttcattgtttctt
tagctggacagaaactttagtttcatgaagtcccacttgttgattaccaa
cctcagttcttaggcaaattgaattattttcagaaagtccttttctacat
ttaaatcaacaatgttttcttctagcagtattgggcttctattttccctc
tttgatccatttggagttagtttttgtgtaaggtgatatatactagttta
atttcactcttctgcatgtgagcatccagtttccccagcacaatttgttg
gagatgatttattttctccagatcatttttggcatctttgtcaaatatta
aataattgaagttaaagatattcacatttgcatcttggatttttggccca
ttgatttacattttttggaatgtcaatcactccagcatggttctttttcc
tcaggattcctttggctatccaggaccttttgtgagtccatttccaagtg
aatcttaggagaggtcttttccctatttttgtaaagtatgagatgggaat
ttttaattgagattatactgagtctgtaaactgcttttggaaaaatggtc
atcttctcaatattaattctaccagtacatgagcacagggtgtcttttca
ttctctagtgacttcccctttttctctctttagaggtttaatgtttcact
gtacaggttttgttttgttttcaatttttttgcatcaatatgtaatgtat
ttgtgctctttcctactataggattgctaccaacctatcccagaggtttt
gttgtgattttgttttcatttacttgggaattttttttttcttgattttc
ctcccctttcagtctattcatccttcacagtgagttgtttaatttccagg
aagctttttttttctgtcagttttcagtttattttattgagtctaagaga
aacataaaagttatttcatctttcaattttataaatttgctttgtgttct
agatgttggtctgtacagaaaaagctacatgcactgcttaataaattggg
tattctttggatcaatgttgtctgagaaatctcgtaagcctgttgaggtt
aggtcatattccggaaatacggttattccggtcaatggcaaggaactgtg
catcgatctttaatcatgaataactatg
gaattctttgtagaccaggctggccccaaactcatagagattcagctgcc
tctgactcccaaatgctgagattaaagacatgcaccaccatgcctagctc
aaactcataatttttaacttcagcacaattttagttgtagtcactcagaa
catactttgaagaaaaatgaatcagtacatttgactgaagagacaataac
attttggaagaatttattgttttcccttttgttcaaaaatacaaaagtca
gaaataccaaaagctcatagaaaggctcctttgttctgtggtacaagact
tagcatagctgtttcaagtttgcttttctattggctgtgataaatcactg
gtgaaatgcagctctggggagaaaagagtacaggttatagtcagttatgg
agggactgaagcagagaccatggaggaaggaccactgcttatgacttgtc
tagcctggctttcttatgtagcccaggtttacctgcccaggattggcatt
gtccacagtgggatgattcccagccacataatttagcaatgaagaaaatg
cccctcacacatgtccataagccactctgaaggaggtggtttctcagagg
aggttcagttttcccagctatatcaagttgatgacccagactagccacca
taacagttacacatagtaagaaactggtgggatcataggagctaatcatt
tggacagtaagtttcaaggatgactagagttggttttagaacctgaaagc
ttttaggaaacattctaagggtgatacttacagtgtgagcatagggagtt
tgaatgccaaaacaaaaacaaaaacaaacaaacaataaaacaagtagttt
gtgtagtttgggaatagtgagtactcctacattataatttgggagattac
acttatttatatatgtgcaaactatgtatgatgggactttttagagctta
ttttgtaagcttggcatgatcagggttaggtaggagagttatataatata
tccaagagaatggtttccccattctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_58625669_58626696
seq2: B6Ng01-284O15.g_65_1091

seq1  GAATTCTTTGTAGACCAGGCTGGCCCCAAACTCATAGAGATTCAGCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAGACCAGGCTGGCCCCAAACTCATAGAGATTCAGCTGCC  50

seq1  TCTGACTCCCAAATGCTGAGATTAAAGACATGCACCACCATGCCTAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCCCAAATGCTGAGATTAAAGACATGCACCACCATGCCTAGCTC  100

seq1  AAACTCATAATTTTTAACTTCAGCACAATTTTAGTTGTAGTCACTCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATAATTTTTAACTTCAGCACAATTTTAGTTGTAGTCACTCAGAA  150

seq1  CATACTTTGAAGAAAAATGAATCAGTACATTTGACTGAAGAGACAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTGAAGAAAAATGAATCAGTACATTTGACTGAAGAGACAATAAC  200

seq1  ATTTTGGAAGAATTTATTGTTTTCCCTTTTGTTCAAAAATACAAAAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAAGAATTTATTGTTTTCCCTTTTGTTCAAAAATACAAAAGTCA  250

seq1  GAAATACCAAAAGCTCATAGAAAGGCTCCTTTGTTCTGTGGTACAAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACCAAAAGCTCATAGAAAGGCTCCTTTGTTCTGTGGTACAAGACT  300

seq1  TAGCATAGCTGTTTCAAGTTTGCTTTTCTATTGGCTGTGATAAATCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAGCTGTTTCAAGTTTGCTTTTCTATTGGCTGTGATAAATCACTG  350

seq1  GTGAAATGCAGCTCTGGGGAGAAAAGAGTACAGGTTATAGTCAGTTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGCAGCTCTGGGGAGAAAAGAGTACAGGTTATAGTCAGTTATGG  400

seq1  AGGGACTGAAGCAGAGACCATGGAGGAAGGACCACTGCTTATGACTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGAAGCAGAGACCATGGAGGAAGGACCACTGCTTATGACTTGTC  450

seq1  TAGCCTGGCTTTCTTATGTAGCCCAGGTTTACCTGCCCAGGATTGGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGGCTTTCTTATGTAGCCCAGGTTTACCTGCCCAGGATTGGCATT  500

seq1  GTCCACAGTGGGATGATTCCCAGCCACATAATTTAGCAATGAAGAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGTGGGATGATTCCCAGCCACATAATTTAGCAATGAAGAAAATG  550

seq1  CCCCTCACACATGTCCATAAGCCACTCTGAAGGAGGTGGTTTCTCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCACACATGTCCATAAGCCACTCTGAAGGAGGTGGTTTCTCAGAGG  600

seq1  AGGTTCAGTTTTCCCAGCTATATCAAGTTGATGACCCAGACTAGCCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGTTTTCCCAGCTATATCAAGTTGATGACCCAGACTAGCCACCA  650

seq1  TAACAGTTACACATAGTAAGAAACTGGTGGGATCATAGGAGCTAATCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTACACATAGTAAGAAACTGGTGGGATCATAGGAGCTAATCATT  700

seq1  TGGACAGTAAGTTTCAAGGATGACTAGAGTTGGTTTTAGAACCTGAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTAAGTTTCAAGGATGACTAGAGTTGGTTTTAGAACCTGAAAGC  750

seq1  TTTTAGGAAACATTCTAAGGGTGATACTTACAGTGTGAGCATAGGGAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAAACATTCTAAGGGTGATACTTACAGTGTGAGCATAGGGAGTT  800

seq1  TGAATGCCAAAACAAAAACAAAAACAAACAAACAATAAAACAAAGTAGTT  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAATGCCAAAACAAAAACAAAAACAAACAAACAATAAAAC-AAGTAGTT  849

seq1  TGTGTAGTTT-GGAATAGTGAGTACTCCTAACATTATAATTTGGAAGATT  899
      |||||||||| |||||||||||||||||| |||||||||||||| |||||
seq2  TGTGTAGTTTGGGAATAGTGAGTACTCCT-ACATTATAATTTGGGAGATT  898

seq1  ACACTTATTTATATATGTGCAAACTATGTATGATGGGAC-TTTTAGAGCT  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACACTTATTTATATATGTGCAAACTATGTATGATGGGACTTTTTAGAGCT  948

seq1  TATTTTGTAAGCTTGGCCTGATTAGGGTTAGGTAGGAGAGTTATAAAAAT  998
      ||||||||||||||||| |||| ||||||||||||||||||||| | |||
seq2  TATTTTGTAAGCTTGGCATGATCAGGGTTAGGTAGGAGAGTTAT-ATAAT  997

seq1  ATA-GCAAGAGAATGGGTTTCCCCATCCTGA  1028
      |||  ||||||||| ||||||||||| ||||
seq2  ATATCCAAGAGAAT-GGTTTCCCCATTCTGA  1027