BAC Information

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BAC

Clone NameB6Ng01-285D07
Chromosome6 (Build37)
Map Location 78,147,330 - 78,148,243
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnna2, Lrrtm1, LOC668169
Downstream geneEG434050, Pap, Reg3d, Reg3a, Reg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1, LOC384440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285D07.bB6Ng01-285D07.g
ACCGA083714GA083715
length1,207915
definitionB6Ng01-285D07.b B6Ng01-285D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgaactctatttttaaaattgggttgtttgtttccctgatgtct
tttttttttttttttttttttagtttttcagtttaaatattagccatttg
tcagatgtatacagtaaaatcttatctcattgttaaccagctacattgtc
caaatgatggtgtcctttgacatacagaaccttttcattttcaagaggtg
tcatttattaatatttttcttagtaactgtgaataagtttagttcaaaaa
gtcttattttgtgtgccaatgatgtcaaagccattccccctttctcttcc
ataaggtgcaatgtgcctgattttatgttgaggtctttgattcttttgga
gttaagttttgtgcaggctgtgaagtatttgcattcttctgaatatgggc
acaaaggatgaccaccactagttgttgaagatgctatcttttgttccagt
gtatacatctagtttccttatttaaaaaaaatcacatctcataggtgcat
aaatttatgatttttcttcggttttattccattgttcaatgtgaggtatt
tatttatttatttatttattttatttattatgccaatttttgctgttttt
attacaatagctctataatataattgaactaccagcagttcttttattat
taaggaatttttaagctattctgttttttttcttatttccatatgaagct
aaatatcatcctttcaagttctgtggagaattatgttggaattttgataa
ggattacattaagtctgttgatttcttttggagagatgaccattcttact
atgttagccttaccaattcatgaccgagcatgtgaattcattccatcttc
taatatctaaaacctttttttttaatgctttaaaggtattattattatta
ttattattattattataattaagcccttccacttggtttttaaaactata
ccaaaatatttttaaagctcctgtaataagtatttctcagctgggcggtg
gtggtgcacacctttaaatccccagcacttggggaggcagaaggcaagca
ggatttcctgagtttgaagccagccctagtctacaaagtgagcttccaca
gccagggctatacagagaaaaccctgtcctcaaggaaaaaaagctattct
caggttaagtgatatgttcactaatgaaagagcctacactgcgatagatc
ttgtccg
gaattcacctctgttttgttttgtttctatataccatgcttcaaactgcc
ctttgaaactgcctactacccttcaacctggctcgttcaaagatgggtct
gattggaaatatgtagggaacctgactactatgaaaacgtttacttggcc
actagttaatcattctgatggccctgtattttaagtgtttattgattttt
ctagtctttcatgattttgagttctggatcctagctgtggatatagtcac
aatagctttctcatttgcaggaataagcaggatcctgactcagttattca
ccaagtgcttgataaataccagctttaattttctcctctgctaaaagaga
atcacagtagctccttttagagggttatgaagagtaaataatttttatag
catataacacagtgatagccatttgtaagatagtactaactccacgtgta
tttattgaatgcttgaccaattgtgttttgtattatcaagagtctatcaa
aatgctggtgttcaaaatttgttctcatttgtttattcagtttcctgtag
ctctgatgtctattagtatatccaccaattttgcctgatgatgttattgc
tgaacatagggttttatggggcttctttgaacttctcttaatctctattc
agtactctggacacatgtctgggaatgaacagactttgttatctgtgttg
gagtaggtgataaatggacctctttagttctgactccatcatctccgtta
atacgtgcaccagacctctgtagtcaccctttgttatcatgtagctctca
ggattggaaagcaatatcccttgtttgtttcctctctcccttcttatcac
cagcctcacaatgtccattatgtatgcatgagtgctcacgttcacatgct
tctggcatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_78147330_78148243
seq2: B6Ng01-285D07.g_68_982

seq1  GAATTCACCTCTGTTTTGTTTTGTTTCTATATACCATGCTTCAAACTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCTGTTTTGTTTTGTTTCTATATACCATGCTTCAAACTGCC  50

seq1  CTTTGAAACTGCCTACTACCCTTCAACCTGGCTCGTTCAAAGATGGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAACTGCCTACTACCCTTCAACCTGGCTCGTTCAAAGATGGGTCT  100

seq1  GATTGGAAATATGTAGGGAACCTGACTACTATGAAAACGTTTACTTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAAATATGTAGGGAACCTGACTACTATGAAAACGTTTACTTGGCC  150

seq1  ACTAGTTAATCATTCTGATGGCCCTGTATTTTAAGTGTTTATTGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAATCATTCTGATGGCCCTGTATTTTAAGTGTTTATTGATTTTT  200

seq1  CTAGTCTTTCATGATTTTGAGTTCTGGATCCTAGCTGTGGATATAGTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTTTCATGATTTTGAGTTCTGGATCCTAGCTGTGGATATAGTCAC  250

seq1  AATAGCTTTCTCATTTGCAGGAATAAGCAGGATCCTGACTCAGTTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTTCTCATTTGCAGGAATAAGCAGGATCCTGACTCAGTTATTCA  300

seq1  CCAAGTGCTTGATAAATACCAGCTTTAATTTTCTCCTCTGCTAAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTTGATAAATACCAGCTTTAATTTTCTCCTCTGCTAAAAGAGA  350

seq1  ATCACAGTAGCTCCTTTTAGAGGGTTATGAAGAGTAAATAATTTTTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGTAGCTCCTTTTAGAGGGTTATGAAGAGTAAATAATTTTTATAG  400

seq1  CATATAACACAGTGATAGCCATTTGTAAGATAGTACTAACTCCACGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAACACAGTGATAGCCATTTGTAAGATAGTACTAACTCCACGTGTA  450

seq1  TTTATTGAATGCTTGACCAATTGTGTTTTGTATTATCAAGAGTCTATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGAATGCTTGACCAATTGTGTTTTGTATTATCAAGAGTCTATCAA  500

seq1  AATGCTGGTGTTCAAAATTTGTTCTCATTTGTTTATTCAGTTTCCTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGTGTTCAAAATTTGTTCTCATTTGTTTATTCAGTTTCCTGTAG  550

seq1  CTCTGATGTCTATTAGTATATCCACCAATTTTGCCTGATGATGTTATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGTCTATTAGTATATCCACCAATTTTGCCTGATGATGTTATTGC  600

seq1  TGAACATAGGGTTTTATGGGGCTTCTTTGAACTTCTCTTAATCTCTATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATAGGGTTTTATGGGGCTTCTTTGAACTTCTCTTAATCTCTATTC  650

seq1  AGTACTCTGGACACATGTCTGGGAATGAACAGACTTTGTTATCTGTGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTGGACACATGTCTGGGAATGAACAGACTTTGTTATCTGTGTTG  700

seq1  GAGTAGGTGATAAATGGACCTCTTTAGTTCTGACTCCATCATCTCCGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGTGATAAATGGACCTCTTTAGTTCTGACTCCATCATCTCCGTTA  750

seq1  ATACGTGCACCAGACCTCTGTAGTCACCCTTTGTTATCATGTAGCTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTGCACCAGACCTCTGTAGTCACCCTTTGTTATCATGTAGCTCTCA  800

seq1  GGATTGGAAAGCAATATCCCTTGTTTGTTTCCTCTCTCCCTTCTTATCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGAAAGCAATATCCCTTGTTTGTTTCCTCTCTCCCTTCTTATCAC  850

seq1  CAGCCTCACAATGTCCATTATGTATGCATGAGTGCTCACGTTCACATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCACAATGTCCATTATGTATGCATGAGTGCTCACGTTCACATGCT  900

seq1  TCT-GCATGTGTGTG  914
      ||| |||||||||||
seq2  TCTGGCATGTGTGTG  915