BAC Information

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BAC

Clone NameB6Ng01-285G13
Chromosome6 (Build37)
Map Location 25,881,161 - 25,882,169
singlet/doubletsinglet
Overlap genenone
Upstream gene6332401O19Rik, LOC384358, Gpr37, Pot1a
Downstream geneEG626912, LOC100041210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285G13.bB6Ng01-285G13.g
ACCGA083866GA083867
length1,1791,075
definitionB6Ng01-285G13.b B6Ng01-285G13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaactttacacctcattgtgttcaattataatcatatttcaa
atagaaaaatattaaagagtttaatcatttttggcaaacccaagggcttt
cattttttatgaattccctcctgtggaagcttttccatggtatgtttatt
tacacatgtgctttataactgtccatctataggcaataaaactacaaaga
cagaaaagtagtctgcacaggggagagtgttctcacagaagctgacagct
tctgggacaggcgggagccacagagcttctgaggtagcgcccttttcggg
ctccagacatctgactacctccccgtacagaggacagttgtccacccggc
ccaggaggcttttgcctcaggatcagcaggagccatcttggttccaggac
tccacagaaaagtagtctgcacaagtgagagtgtgcacacagaagctacc
agcttctgtgacaggccaaggcaacacagcttctgggaaaggttctgttt
tggaacttcatcttcggctagaagggaggtcctaacgccagatatctgta
cacctttcctgtaagaggagagcttgcctgcagagagggaattgagcact
gaaactcagaggagagatctagtctcccaggtctgctgatagaggccagc
agcatcaccagtggaacaatctctaaacagagacaactataacaactaac
tccagagattaccagatggtgaaaggtaagtgtaagaatcttacaaaaag
aaaccaagaccactcaccatcatcagaacccagcactcccacttcgccca
gtccagggtaccataatacacccgaaaagctagacccggatttaaaagca
tatctcatgatgatggtagaggacatcaagaagcacctcaaaaactcact
taaagaaatacaggagaacactgctaaacaggtagaagacattaaagagg
agcacaaaaatccctttaaagaattgcaagaaaacacaaccaaacagtga
tggaattggaatagaaccattccaggaccctaaaagggagttagacccat
aaggaaaccgcaagttgagccattgctggagatagaacctagaaagaaat
cctggacatagatggtggcatctgcccaccgatcaggattgagaagaatc
tcgatgccgaagaactctctagagagtca
gaattccaggacagccagggctacgcagagaaatgcaggaagcgggtgtg
gctgcatgggccaagatggtgccctggcccattgccaagtcctgtaaacc
ccacatgtttaccgccttgcccgaacatgcgcagtaaaactgcatgtgta
agctgcctgccaagttagactactcatgatccagacctgtcagcctatct
gtgaccgacctgagttcgtgcctggagcatgagtgagtctgattggatga
ggtggtgtggagcgagatgaggtcagttgccatgaggaaaggtgtagagc
acttgctgcaagaaggacagggatagaagcagctggggagagagctgtaa
gagaaaaagccacaagtaaagaagctgctgcgtaaacctgccttggtgtc
catgttgttcttgtctccgcaggtggcaaggactgcgaaaagtgatggcc
catatggggaactcatcactttggtcggcaatggtaagtaaagaaagtac
aggcctttgaaaattttagtaaacagcggtaaggagattttggtaagcaa
cgccgtttaaagaacgcacaggcttgtaaggttcccgggataaaagggat
gaagcattaaggttctcaggaatagagacaaagggaatttcagtaacaag
tgttcaactgcgactaaaatgaaagtaaaaatgttagccatctggaactt
ggtcaggacgtgcttgagggacgccagtggaaagtacaatgctgaaatag
aggaaggagctgtggtgcttgaggaggctgaggagattgcttctcaggct
agctgcggaaaacctaaacagcttaaacgacaaaccaaagataagaaaga
gaaggaaggaatctagctctgaagggtctactagtgacagcgatgggact
gatagtgacagtgacgtctgtagtcagatgtcctgttggagttttgaggc
atggtaggccacgccaaaccatcagcctcttccgtttgccttctcattcc
cccctataaaggatgagggagacaaaatgggaaagcatagactttccatg
caaaagtcttgggaaaaatggtgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25881161_25882169
seq2: B6Ng01-285G13.g_120_1140

seq1  CATGGGCCAAGATGGTGCCCTGGCCCATTGCCAAGTCCTGTAAACCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCCAAGATGGTGCCCTGGCCCATTGCCAAGTCCTGTAAACCCCAC  50

seq1  ATGTTTACCGCCTTGCCCGAACATGCGCAGTAAAACTGCATGTGTAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTACCGCCTTGCCCGAACATGCGCAGTAAAACTGCATGTGTAAGCT  100

seq1  GCCTGCCAAGTTAGACTACTCATGATCCAGACCTGTCAGCCTATCTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCAAGTTAGACTACTCATGATCCAGACCTGTCAGCCTATCTGTGA  150

seq1  CCGACCTGAGTTCGTGCCTGGAGCATGAGTGAGTCTGATTGGATGAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACCTGAGTTCGTGCCTGGAGCATGAGTGAGTCTGATTGGATGAGGTG  200

seq1  GTGTGGAGCGAGATGAGGTCAGTTGCCATGAGGAAAGGTGTAGAGCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAGCGAGATGAGGTCAGTTGCCATGAGGAAAGGTGTAGAGCACTT  250

seq1  GCTGCAAGAAGGACAGGGATAGAAGCAGCTGGGGAGAGAGCTGTAAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAGAAGGACAGGGATAGAAGCAGCTGGGGAGAGAGCTGTAAGAGA  300

seq1  AAAAGCCACAAGTAAAGAAGCTGCTGCGTAAACCTGCCTTGGTGTCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCACAAGTAAAGAAGCTGCTGCGTAAACCTGCCTTGGTGTCCATG  350

seq1  TTGTTCTTGTCTCCGCAGGTGGCAAGGACTGCGAAAAGTGATGGCCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTGTCTCCGCAGGTGGCAAGGACTGCGAAAAGTGATGGCCCATA  400

seq1  TGGGGAACTCATCACTTTGGTCGGCAATGGTAAGTAAAGAAAGTACAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAACTCATCACTTTGGTCGGCAATGGTAAGTAAAGAAAGTACAGGC  450

seq1  CTTTGAAAATTTTAGTAAACAGCGGTAAGGAGATTTTGGTAAGCAACGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAATTTTAGTAAACAGCGGTAAGGAGATTTTGGTAAGCAACGCC  500

seq1  GTTTAAAGAACGCACAGGCTTGTAAGGTTCCCGGGATAAAAGGGATGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGAACGCACAGGCTTGTAAGGTTCCCGGGATAAAAGGGATGAAG  550

seq1  CATTAAGGTTCTCAGGAATAGAGACAAAGGGAATTTCAGTAACAAGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGGTTCTCAGGAATAGAGACAAAGGGAATTTCAGTAACAAGTGTT  600

seq1  CAACTGCGACTAAAATGAAAGTAAAAATGTTAGCCATCTGGAACTTGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCGACTAAAATGAAAGTAAAAATGTTAGCCATCTGGAACTTGGTC  650

seq1  AGGACGTGCTTGAGGGACGCCAGTGGAAAGTACAATGCTGAAATAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGTGCTTGAGGGACGCCAGTGGAAAGTACAATGCTGAAATAGAGGA  700

seq1  AGGAGCTGTGGTGCTTGAGGAGGCTGAGGAGATTGCTTCTCAGGCTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGTGGTGCTTGAGGAGGCTGAGGAGATTGCTTCTCAGGCTAGCT  750

seq1  GCGGAAAACCTAAACAGCTTAAACGACAAACCAAAGATAAGAAAGAGAA-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCGGAAAACCTAAACAGCTTAAACGACAAACCAAAGATAAGAAAGAGAAG  800

seq1  GAAGGAATCTAGCTCTGAAGGGTCTACTAGTGACAGCGATGGGACTGATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATCTAGCTCTGAAGGGTCTACTAGTGACAGCGATGGGACTGATA  850

seq1  GTGACAGTGACGTCTGTAGTCAGATGTCCTGTTGGAG-TTTGAGGCATGG  898
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGACAGTGACGTCTGTAGTCAGATGTCCTGTTGGAGTTTTGAGGCATGG  900

seq1  TAGGCCACG-CAAACCATCAGCC-CCTCCG-TTGCCTTCTCA-TCCCCCC  944
      ||||||||| ||||||||||||| | |||| ||||||||||| |||||||
seq2  TAGGCCACGCCAAACCATCAGCCTCTTCCGTTTGCCTTCTCATTCCCCCC  950

seq1  TATAAA-GATGAGGGAGACAAAATGGGAAAGCATAGACTT--CATGCAAA  991
      |||||| |||||||||||||||||||||||||||||||||  ||||||||
seq2  TATAAAGGATGAGGGAGACAAAATGGGAAAGCATAGACTTTCCATGCAAA  1000

seq1  AGTCT--GGAAAAAT-GTGCC  1009
      |||||  |||||||| |||||
seq2  AGTCTTGGGAAAAATGGTGCC  1021