BAC Information

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BAC

Clone NameB6Ng01-285H19
Chromosome6 (Build37)
Map Location 46,504,866 - 46,505,531
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneRbpsuh-rs3
Downstream geneLOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1, Ezh2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285H19.bB6Ng01-285H19.g
ACCGA083926GA083927
length1,0171,174
definitionB6Ng01-285H19.b B6Ng01-285H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatagtccatttaatgatatgatccatgataatatcccataa
atactagctcctttgagatccgatctttggctaaagtggtttaaatactt
ttaaagtaaaatagaaatatctaaataaaatgtgaagttatacagcaagt
attttttttacatttactttttgtattaattgcttattatattcatttac
attttagatagagtctcccttcctggtctacccttcccacccaactccca
ccccccacccagtccattctccctctcctatgcctctaagagagtactcc
cccacccactcacccaccccatctcaaccctctaacatcacccaacctac
tctggggcaacaagcctacaaatgaccaagagcctcccctttcattgatg
ccagatgagacaatcctctgctacatgtgtagcatgagccatggacccat
tcatgtatatactctggttagtactttagttcctgggagttctgagggtt
ccattttgttgatactgctgttcttcctatggggttgcaatccccttcag
ctccttcaatccttcccataactcttctataggagtcctgacctgattcc
aatggttcgttgtaagtatctgtatctgtttcaatcagctgctagtagaa
tctctcagaggacagccatgccaggcttctgtctgcaagcacaacatggc
atcagtaatagtgtcagggtttcctgcctatgcatgggatctcaaggtgg
tacagtctctagatggcctttcattcagtctctgctccatctttttgccc
ctgtgtctcctttagacaggaacaattctgggttaaaattgaggtggatg
ggtggccccgtccctcaactgggggccatgcctatctactggagttggtc
tctttaggttctatgtccctctctgttggatatttcggcaaacatgggtc
ctggaagcctctcataatccctggtatctgggactttctagagcctacct
gccccaactccccaccc

gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcagtgcgcag
agaggcaatgcgcagagaggcagtgcgcagactcattcattcccagagag
gaacaaaggaaaatacaacaggcatttccggtctttgaaggagccgaggg
tgggcgtgtccacgctccggtagaatacttacaaattaaagagcttgccg
agtcggtccgtaaatacggaaccaatgctaattttaccttggtgcagtta
gacaggcttgccggcatggcactaactcctgctgactggcaaacggttgt
aaaagccgctctccctagtatgggcaaatatatggaatggagagctcttt
ggcatgaaactgcacaagcacaggcccgagcaaacgcagctgctttgact
ccagagcagagagattggacttttgacttgttaacgggtcagggagctta
ttctgctgatcaaacaaactaccattggggagcttatgcccagatttctt
ccacggctattagggcctggaaggcgctctcccgagcaggtgaaaccact
ggtcaattaacaaaagttgtccagggacctcagaatccttctcagatttt
gtggccagaatgacagaggcagcagagcgtatttttggagagtcagagca
agctgcgcctctgatagaacagctaatctatgagcaagccacaaaggagt
gccgagcggccattagccccaagaaagaacaaaggcttacaagactggct
caagggtctgtcgagagcttgggggacctctcaccaatgcaagcttagcg
ggccgcccatcctccaaatctcagaacgctccatgagcagaaatgatcag
aggacatgtttatgcggaagcctgggcaattttagaagattggcagagct
tccagaataacatgagactctccactcttgctctaaggtgtgcaggttta
tcatagatagcctggaacccacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_46504866_46505531
seq2: B6Ng01-285H19.b_44_709

seq1  GAATTCAATATAGTCCATTTAATGATATGATCCATGATAATATCCCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATAGTCCATTTAATGATATGATCCATGATAATATCCCATAA  50

seq1  ATACTAGCTCCTTTGAGATCCGATCTTTGGCTAAAGTGGTTTAAATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGCTCCTTTGAGATCCGATCTTTGGCTAAAGTGGTTTAAATACTT  100

seq1  TTAAAGTAAAATAGAAATATCTAAATAAAATGTGAAGTTATACAGCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAAATAGAAATATCTAAATAAAATGTGAAGTTATACAGCAAGT  150

seq1  ATTTTTTTTACATTTACTTTTTGTATTAATTGCTTATTATATTCATTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTACATTTACTTTTTGTATTAATTGCTTATTATATTCATTTAC  200

seq1  ATTTTAGATAGAGTCTCCCTTCCTGGTCTACCCTTCCCACCCAACTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGATAGAGTCTCCCTTCCTGGTCTACCCTTCCCACCCAACTCCCA  250

seq1  CCCCCCACCCAGTCCATTCTCCCTCTCCTATGCCTCTAAGAGAGTACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCAGTCCATTCTCCCTCTCCTATGCCTCTAAGAGAGTACTCC  300

seq1  CCCACCCACTCACCCACCCCATCTCAACCCTCTAACATCACCCAACCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACTCACCCACCCCATCTCAACCCTCTAACATCACCCAACCTAC  350

seq1  TCTGGGGCAACAAGCCTACAAATGACCAAGAGCCTCCCCTTTCATTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCAACAAGCCTACAAATGACCAAGAGCCTCCCCTTTCATTGATG  400

seq1  CCAGATGAGACAATCCTCTGCTACATGTGTAGCATGAGCCATGGACCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGAGACAATCCTCTGCTACATGTGTAGCATGAGCCATGGACCCAT  450

seq1  TCATGTATATACTCTGGTTAGTACTTTAGTTCCTGGGAGTTCTGAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTATATACTCTGGTTAGTACTTTAGTTCCTGGGAGTTCTGAGGGTT  500

seq1  CCATTTTGTTGATACTGCTGTTCTTCCTATGGGGTTGCAATCCCCTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGTTGATACTGCTGTTCTTCCTATGGGGTTGCAATCCCCTTCAG  550

seq1  CTCCTTCAATCCTTCCCATAACTCTTCTATAGGAGTCCTGACCTGATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCAATCCTTCCCATAACTCTTCTATAGGAGTCCTGACCTGATTCC  600

seq1  AATGGTTCGTTGTAAGTATCTGTATCTGTTTCAATCAGCTGCTAGTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTCGTTGTAAGTATCTGTATCTGTTTCAATCAGCTGCTAGTAGAA  650

seq1  TCTCTCAGAGGACAGC  666
      ||||||||||||||||
seq2  TCTCTCAGAGGACAGC  666


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