BAC Information

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BAC

Clone NameB6Ng01-285J23
Chromosome6 (Build37)
Map Location 109,390,041 - 109,390,676
singlet/doubletsinglet
Overlap genenone
Upstream geneItpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371, LOC639110
Downstream geneLOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285J23.bB6Ng01-285J23.g
ACCGA084026GA084027
length1,013895
definitionB6Ng01-285J23.b B6Ng01-285J23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttgactatatggagagtttgaagtcctgtgctaccttagaa
ctttctccaaatacatagtttgaaatccttacacataattggaatattta
taaatcacccgtttattatgaaatggaaaaagccactttggaaattatat
cagcacaagaactgtagagtaatgatcatggaaacattgtcattgattga
tcaaaacataaaccattcaagtgtctatcaactcattaatgaattctaag
atgtagcatatttctattatgtaatattattctacaacaaagaaaagaaa
tattgagacatgttacagtacaaatgatccttcaacatatgctaagtgaa
agaaactaggcagaaatatatacatgacactcccagtcctctccagctcc
ctcccccaacacctgactgaaatacccataccccttctttccccctttac
cacccagtttcctccctctatccacctacaattactatttcgtttccatt
gttgaatgaaattcacacatcctccattgggtcttccttattacttattt
tctttgagtctgtagattgtagcatcattatcctttactttagggttaat
gtccaattataagcaagtacatcctatgtttgtctttctgggtctgcttt
actcattcaggatgatggtgagagagggctgggaaggagaatggaaatcg
gatgggcagcatctctggggctagctggagacctaggatgggaggctaat
gaggaatctataggagtgactccagctgagatttctcccagcaggggata
tagaaattgaagtggccacctcatatataacttccagtggatggcggggg
acatcaacctacccacaaaaccttcaacccaaaatttgttctgctgaaaa
gatgcagaagggtaaagatagcgcagagactgagggaatggccaagcaat
gagtggtccaacttgagacctatcctatgggagagacacaacccctgaca
ctataatgatact

gaattctgtaattcttctaacagtagtattatgactgttctatatttaat
taacatgggtctattgaaacactcaaagcattgtaaatcatttacaaatt
aaatatctgtacatataacttttgggctttttaattttatattgatttta
actttttaattgatttataattacatcatttctctacttccattgctctc
tcattttctttcaaactaataacgtcttttcaaactctctgtttttaata
taaatattacatcctgagtccgtttagttttgctgtcatgtcgatgattc
gggactagtcactttgtactagataaccaattaggagcctcatccatggg
aggggctaattctttctctgagcagtaactgatgttatcaagtttataac
tagtgatgaccccatgagatctccccttcatctttagtatgtctattggt
actgtcattgttcagctctcggttacaaaaccatatgaagtagaaatttc
tgttttctttggagacttagtgtgtcatatgatggttttctggaaactgt
cttatgagaggacgtttctgctgaagcagacacatacatgggaggatgtt
ttgctgagtacagacatgtggtgattttctggaagtagcctggggttggg
gggggaggcatatgatgctttgctagagtagacactttgagagaacatgt
gatgtttgcaaggggtgtaaatataactcaacagacagtggatgctatag
tttttggtatgtcttaacactctttgcttatcattcttgggccttcgctg
acaacattgtatgacattagttcaccttaaccatttctttgtctggtcac
tgtttgtcatgacttttattaagagaaaatgcaacaaaaaaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109390041_109390676
seq2: B6Ng01-285J23.b_48_683

seq1  GAATTCTCCTTGACTATATGGAGAGTTTGAAGTCCTGTGCTACCTTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTGACTATATGGAGAGTTTGAAGTCCTGTGCTACCTTAGAA  50

seq1  CTTTCTCCAAATACATAGTTTGAAATCCTTACACATAATTGGAATATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCAAATACATAGTTTGAAATCCTTACACATAATTGGAATATTTA  100

seq1  TAAATCACCCGTTTATTATGAAATGGAAAAAGCCACTTTGGAAATTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCACCCGTTTATTATGAAATGGAAAAAGCCACTTTGGAAATTATAT  150

seq1  CAGCACAAGAACTGTAGAGTAATGATCATGGAAACATTGTCATTGATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAAGAACTGTAGAGTAATGATCATGGAAACATTGTCATTGATTGA  200

seq1  TCAAAACATAAACCATTCAAGTGTCTATCAACTCATTAATGAATTCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACATAAACCATTCAAGTGTCTATCAACTCATTAATGAATTCTAAG  250

seq1  ATGTAGCATATTTCTATTATGTAATATTATTCTACAACAAAGAAAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCATATTTCTATTATGTAATATTATTCTACAACAAAGAAAAGAAA  300

seq1  TATTGAGACATGTTACAGTACAAATGATCCTTCAACATATGCTAAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGACATGTTACAGTACAAATGATCCTTCAACATATGCTAAGTGAA  350

seq1  AGAAACTAGGCAGAAATATATACATGACACTCCCAGTCCTCTCCAGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTAGGCAGAAATATATACATGACACTCCCAGTCCTCTCCAGCTCC  400

seq1  CTCCCCCAACACCTGACTGAAATACCCATACCCCTTCTTTCCCCCTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAACACCTGACTGAAATACCCATACCCCTTCTTTCCCCCTTTAC  450

seq1  CACCCAGTTTCCTCCCTCTATCCACCTACAATTACTATTTCGTTTCCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGTTTCCTCCCTCTATCCACCTACAATTACTATTTCGTTTCCATT  500

seq1  GTTGAATGAAATTCACACATCCTCCATTGGGTCTTCCTTATTACTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATGAAATTCACACATCCTCCATTGGGTCTTCCTTATTACTTATTT  550

seq1  TCTTTGAGTCTGTAGATTGTAGCATCATTATCCTTTACTTTAGGGTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTCTGTAGATTGTAGCATCATTATCCTTTACTTTAGGGTTAAT  600

seq1  GTCCAATTATAAGCAAGTACATCCTATGTTTGTCTT  636
      ||||||||||||||||||||||||||||||||||||
seq2  GTCCAATTATAAGCAAGTACATCCTATGTTTGTCTT  636


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