BAC Information

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BAC

Clone NameB6Ng01-286H08
Chromosome6 (Build37)
Map Location 74,386,309 - 74,387,472
singlet/doubletsinglet
Overlap genenone
Upstream gene4931417E11Rik, LOC100043338
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286H08.bB6Ng01-286H08.g
ACCGA084649GA084650
length1,2221,160
definitionB6Ng01-286H08.b B6Ng01-286H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccattcctaaacatgataaaagcaatctacagcaaacca
gtagcgaacatcaaagtaaatggtgagaagctggaggcaatctcactact
aaaatcagggaatagacaaggctatgcactctctctacctattcaacatt
gtacttgaagtcctagccagagcaattcgacaacaaaaggagatcaaggg
attacaaattggaaaggaagaagtcaaaatatcactttttggagatgata
tgatagtatatataagtgaccctaaaaattccaccagagaactcctaagc
ctgataaacagcttcattcaagtagctggatataaaattaactcaaacaa
gtcaatgccctttctctacacaaaggataaacaggctgagaaagaaatta
gggaaacaacacccttctcaatagtcacaaataatataaaataccttggc
gtgactctaactaaggaagtgaaatatctgtatgttaagaacttcaagtc
tctgaagaaacaaattaatgaagatctcagaagatggagtcctcccatgc
tcatggattggcacgatcaatagtaaaaatagctatcttgccaaaagcaa
tctacagattcaaggcaatccccatcaaatttccaaattaattcttcaat
gaattagagagggcaatcggcagattcatctggataacaaaaacctagga
tagcaaaaactcttctcagtgataaaagaacctcgggtggaatcaccatg
cctgacctaaagctgtactacagagcaattgtgataaaaactgcatggta
ctggtatagcaacagaaaagtagaccaatggaagagaattgaagacccag
agatgaacccacacacctatggtcactttgatctttgacaagggagctaa
aaccatccaggggataaaagacagcattttcaacaaatggtgctggcaca
actggcagttatcatgtagaagaatgtgaattggatccattcctatcttc
ttgtactaaggtcaaaattaagtggattgaagcactccacattaaaccag
agacactgaaagcttatatgaggagaagtaggaaaagcctcgaagatttg
gttacaggggaaagttccttgaattgaaacagcacgctttgttgcttgta
gaatcaggacttgatattggaactctaaagttacaaggcttttctggcaa
ggccaaaggatacacccactca
gaattcatttccttactacataaacatttaccaaaattaattaaagacag
acacaaataaaatatacttagcaattgattctcctgtgaagatactcatg
taaataaattaatgagatatacacaagatagttatttaaaaggccagaat
taaataccccagcacagacttgtctgagattgtggagaaatgtgtttcct
ataatgctgagaagaatgcaatcacatactgcatcatgggtcatattttt
tatgtcaaggttgatcatattgacaggctatgatacgtgatatctcctgc
agcatatgtagttaacagaaggtatatttgataaaatgtgatgacctaat
tatatacagaatgacacagagtacctacttctactggctatttttttctg
ctgccttgataataaccctaatgtgacctaagcaacctaaggaagaaagg
gattactttgtcttacctttccagggtcaagttcataatggcaataatat
cctgatgacaggagcatgaggcagctagttccatcatatccacagtcacg
acaaaaaaagtgaatgctagtgctcatttgagattatattattattatta
ttatcaatatcattattattattattattatcaatgattctgtcaaggac
catagtgtgtagatgagtgccaccctttgtgaagttgagtcttcttactt
tacttaacttggaaaagtgctcacaggtatgatccgatgggtgtcctagg
taattctagatcctgtagaaagaaatttgctattccacattgaaaataaa
agggataattatatagatactaaagacaaaagtagagattttgaagcttg
ttttaaataacttgacctgacaatgctaaaagaaacaccaacaaccacag
atttatgatattctcctaaatttatatggaccattctgcagaaataagat
tctctactaggtgttaatattttattcttgttctgaaaataaatttccat
aataatatgttctcattttatgtagtttattaatttatgccaagtctgta
gttttctgttttttctttctgactattttttatgtttctttgaagtcaga
gtagcaacacataggaaaatacccttgactctttcactcaaggtcttagt
atggaaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74386309_74387472
seq2: B6Ng01-286H08.g_69_1228

seq1  GAATTCATTTCCTTACTACATAAACATTTACCAAAATTAATTAAAGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCCTTACTACATAAACATTTACCAAAATTAATTAAAGACAG  50

seq1  ACACAAATAAAATATACTTAGCAATTGATTCTCCTGTGAAGATACTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATAAAATATACTTAGCAATTGATTCTCCTGTGAAGATACTCATG  100

seq1  TAAATAAATTAATGAGATATACACAAGATAGTTATTTAAAAGGCCAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATTAATGAGATATACACAAGATAGTTATTTAAAAGGCCAGAAT  150

seq1  TAAATACCCCAGCACAGACTTGTCTGAGATTGTGGAGAAATGTGTTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCCCAGCACAGACTTGTCTGAGATTGTGGAGAAATGTGTTTCCT  200

seq1  ATAATGCTGAGAAGAATGCAATCACATACTGCATCATGGGTCATATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTGAGAAGAATGCAATCACATACTGCATCATGGGTCATATTTTT  250

seq1  TATGTCAAGGTTGATCATATTGACAGGCTATGATACGTGATATCTCCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAAGGTTGATCATATTGACAGGCTATGATACGTGATATCTCCTGC  300

seq1  AGCATATGTAGTTAACAGAAGGTATATTTGATAAAATGTGATGACCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGTAGTTAACAGAAGGTATATTTGATAAAATGTGATGACCTAAT  350

seq1  TATATACAGAATGACACAGAGTACCTACTTCTACTGGCTATTTTTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAGAATGACACAGAGTACCTACTTCTACTGGCTATTTTTTTCTG  400

seq1  CTGCCTTGATAATAACCCTAATGTGACCTAAGCAACCTAAGGAAGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGATAATAACCCTAATGTGACCTAAGCAACCTAAGGAAGAAAGG  450

seq1  GATTACTTTGTCTTACCTTTCCAGGGTCAAGTTCATAATGGCAATAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTTTGTCTTACCTTTCCAGGGTCAAGTTCATAATGGCAATAATAT  500

seq1  CCTGATGACAGGAGCATGAGGCAGCTAGTTCCATCATATCCACAGTCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGACAGGAGCATGAGGCAGCTAGTTCCATCATATCCACAGTCACG  550

seq1  ACAAAAAAAGTGAATGCTAGTGCTCATTTGAGATTATATTATTATTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAGTGAATGCTAGTGCTCATTTGAGATTATATTATTATTATTA  600

seq1  TTATCAATATCATTATTATTATTATTATTATCAATGATTCTGTCAAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAATATCATTATTATTATTATTATTATCAATGATTCTGTCAAGGAC  650

seq1  CATAGTGTGTAGATGAGTGCCACCCTTTGTGAAGTTGAGTCTTCTTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTGTAGATGAGTGCCACCCTTTGTGAAGTTGAGTCTTCTTACTT  700

seq1  TACTTAACTTGGAAAAGTGCTCACAGGTATGATCCGATGGGTGTCCTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAACTTGGAAAAGTGCTCACAGGTATGATCCGATGGGTGTCCTAGG  750

seq1  TAATTCTAGATCCTGTAGAAAGAAATTTGCTATTCCACATTGAAAATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTAGATCCTGTAGAAAGAAATTTGCTATTCCACATTGAAAATAAA  800

seq1  AGGGATAATTATATAGATACTAAAGACAAAAGTAGAGATTTTGAAGCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAATTATATAGATACTAAAGACAAAAGTAGAGATTTTGAAGCTTG  850

seq1  TTTTAAATAACTTGACCTGACAATGCTAAAAGAAACACCAAACAACCACA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTTAAATAACTTGACCTGACAATGCTAAAAGAAACACC-AACAACCACA  899

seq1  GATTATTGATATTCTCCTAAATTTATATGGACCATTCTGCAGAA--TAGA  948
      ||||  ||||||||||||||||||||||||||||||||||||||   |||
seq2  GATTTATGATATTCTCCTAAATTTATATGGACCATTCTGCAGAAATAAGA  949

seq1  TTCTCTACTAGGTGTTAATATTTTATTCTTGTTCTTGAAAATAAATTTCC  998
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCTCTACTAGGTGTTAATATTTTATTCTTGTTC-TGAAAATAAATTTCC  998

seq1  AT-ATAATATGTTCTCATTTTAATGTAGTTTA-TAAATTATGCAAAGTCT  1046
      || |||||||||||||||||| |||||||||| ||| |||||| ||||||
seq2  ATAATAATATGTTCTCATTTT-ATGTAGTTTATTAATTTATGCCAAGTCT  1047

seq1  GTTAGTTTCTGTTTTTTCTTTTCTGACCTTATTTTTTATAGTTTCCTTTT  1096
      ||   ||||||||||||| ||||||||  |||||||||| |||||  |||
seq2  GTAGTTTTCTGTTTTTTC-TTTCTGAC--TATTTTTTAT-GTTTC--TTT  1091

seq1  GAAGTCCAGAGTAGCCACCACTAG--AAATA-CATTGACTTCTTTCACTC  1143
      ||||| ||||||||| ||   |||  ||||| | ||||| ||||||||||
seq2  GAAGT-CAGAGTAGCAACACATAGGAAAATACCCTTGAC-TCTTTCACTC  1139

seq1  AAGGGCTTAGTATGGAAACAA  1164
      |||| ||||||||||||||||
seq2  AAGGTCTTAGTATGGAAACAA  1160