BAC Information

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BAC

Clone NameB6Ng01-286K18
Chromosome6 (Build37)
Map Location 120,157,419 - 120,158,548
singlet/doubletsinglet
Overlap geneB4galnt3
Upstream geneDcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2
Downstream geneCcdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1, Bcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps, Pex26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286K18.bB6Ng01-286K18.g
ACCGA084805GA084806
length1,1291,223
definitionB6Ng01-286K18.b B6Ng01-286K18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagactcctctcctactttctctttctgctgagacagagtcatgc
tatcttgcaaagactcacctggcatctgtgtagtccaggctggccttaac
tcaggacctcctgcctatcctccagagagctgggattacaggtatgtacc
aacgcctaacttttgtcccatgttttatggagtctgagggctctaacaat
ggggagaacacttccttgccatttacttagttccctgtagagctgggtct
gcaatgtagtgtcaaggttgctccttgctatggtcttggtgtctgccaag
ggctgtgtgataaaggcttgctttccaacctgtggtgctatgggaacctg
tcggaggtgagacttacaggaagaatttagatcactaggatattgaggtt
cccagcctccttctctttcacttcctggtgccatgaggtgagcattgtcc
tctgccataattcatggccccacaggcccaaaagcaacagggcaaggtga
ccatgaaccagatgaacctttcctcagagctgaaagtgtagctcagtgga
agggagcttgcctagcctgcacaaggccttgagtattgttccaggcatga
cgaacagtaacaaacttcatcttcatttaacccagtgtgcggattgtttt
gtttattttaccccaactcgacacaagcgagggtcacctaggacagagga
aactcgatgaagaaagcgtctccatcagactgaactgtgggcaagtctgc
gtggcattttcatcattcatgactgtcgtgggagggtgcagaccactgtg
ggtgttgtcacccctgggcagcgtgagttgtatgagagagcaagatgtag
gactagagagatggctctcagtgtccagaggacctgggctggattcccag
cacctacatgggcagctcaaaaccatctgaaatggtttttaatttaaaaa
attaaaatgagggctggagagatggctcagcagttagagcactggctgcg
ttccagaggtcctgagttcactctcacacgacatgatacagaatggctcc
acaacatctgtatggggatctgaggttctcttctgtcttgcttctctgtt
ctggcatgcagccataacatgccaataga
gaattcccatgggtcctggtgctcactgcccaggcctcaatggatgctga
tgctgagctctcagtctaaggagagacccgtctcaaacaaaaagttggag
aagcaatggaggaagacacccagaattaacttctgggtcacacatgcacc
tgtgggcacgcacacacacagagaaagagaacaggggcggcatgtggcat
tctcgatgctgatgctgttgactgtgaaaggaaacttaagggtttagtca
ttaatgttcagaattaccaatcacacgagtcctgtagcttgtctttccat
ttgccttcctttcctcccttcttcctttcttttagtggtagatagcgaac
ctagtgtgaagcctgcttacctgatgctctatcgctgagccacaccccca
tctcatccttttgctttttagctcaaatgtgtgcacacctaatactgtca
cttgaattctctgttggtgaaactatcagttaggtatgttcctacacgag
ccggtaaaagtatcatttagtctcctgtattacttgtcgtcttggaggct
tactgcttccttctgctaacttaggccaggcctggaagtggctagcctct
gtacaatctaatctaggcctagaatgtttccagcctctgagacttgctgc
tgaataagctcaccttttctagttctttctgatctccagttggctgattc
aactcagctgttctatctgaaactccgctccaagctgactgattcaatct
gtcttttctctctctgcctctccttaattgctctgcttgacctcagacca
actctggcactctgttctaatttttctagctccttctcatttctctggct
cattctgtcttcatctgtgtctagctttgttatctctgcagcctgtctct
gtaaatttctccagtaaacctgctgcttcctctcctgtgcttcactgctc
cttaaacggctttcccttccccctttctcctcatgagatttcagcacaat
ccctgtttctgttcacatattttttcttgatccattcttctgatcttgtt
actttgttctgccattccattcaggatattcaactttttcaaacaacggc
tgctgctggcttcttatttcttcattcattctctccttctcctcttctcc
ctttctcatattaacggtgcaggcagcttccttcatcttcgtcattcctt
cctcttttccttcattatgctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_120157419_120158548
seq2: B6Ng01-286K18.b_46_1174

seq1  GAATTCAGACTCCTCTCCTACTTTCTCTTTCTGCTGAGACAGAGTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTCCTCTCCTACTTTCTCTTTCTGCTGAGACAGAGTCATGC  50

seq1  TATCTTGCAAAGACTCACCTGGCATCTGTGTAGTCCAGGCTGGCCTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGCAAAGACTCACCTGGCATCTGTGTAGTCCAGGCTGGCCTTAAC  100

seq1  TCAGGACCTCCTGCCTATCCTCCAGAGAGCTGGGATTACAGGTATGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACCTCCTGCCTATCCTCCAGAGAGCTGGGATTACAGGTATGTACC  150

seq1  AACGCCTAACTTTTGTCCCATGTTTTATGGAGTCTGAGGGCTCTAACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCTAACTTTTGTCCCATGTTTTATGGAGTCTGAGGGCTCTAACAAT  200

seq1  GGGGAGAACACTTCCTTGCCATTTACTTAGTTCCCTGTAGAGCTGGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAACACTTCCTTGCCATTTACTTAGTTCCCTGTAGAGCTGGGTCT  250

seq1  GCAATGTAGTGTCAAGGTTGCTCCTTGCTATGGTCTTGGTGTCTGCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTAGTGTCAAGGTTGCTCCTTGCTATGGTCTTGGTGTCTGCCAAG  300

seq1  GGCTGTGTGATAAAGGCTTGCTTTCCAACCTGTGGTGCTATGGGAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGTGATAAAGGCTTGCTTTCCAACCTGTGGTGCTATGGGAACCTG  350

seq1  TCGGAGGTGAGACTTACAGGAAGAATTTAGATCACTAGGATATTGAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGGTGAGACTTACAGGAAGAATTTAGATCACTAGGATATTGAGGTT  400

seq1  CCCAGCCTCCTTCTCTTTCACTTCCTGGTGCCATGAGGTGAGCATTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTCCTTCTCTTTCACTTCCTGGTGCCATGAGGTGAGCATTGTCC  450

seq1  TCTGCCATAATTCATGGCCCCACAGGCCCAAAAGCAACAGGGCAAGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATAATTCATGGCCCCACAGGCCCAAAAGCAACAGGGCAAGGTGA  500

seq1  CCATGAACCAGATGAACCTTTCCTCAGAGCTGAAAGTGTAGCTCAGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAACCAGATGAACCTTTCCTCAGAGCTGAAAGTGTAGCTCAGTGGA  550

seq1  AGGGAGCTTGCCTAGCCTGCACAAGGCCTTGAGTATTGTTCCAGGCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCTTGCCTAGCCTGCACAAGGCCTTGAGTATTGTTCCAGGCATGA  600

seq1  CGAACAGTAACAAACTTCATCTTCATTTAACCCAGTGTGCGGATTGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAGTAACAAACTTCATCTTCATTTAACCCAGTGTGCGGATTGTTTT  650

seq1  GTTTATTTTACCCCAACTCGACACAAGCGAGGGTCACCTAGGACAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTACCCCAACTCGACACAAGCGAGGGTCACCTAGGACAGAGGA  700

seq1  AACTCGATGAAGAAAGCGTCTCCATCAGACTGAACTGTGGGCAAGTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGATGAAGAAAGCGTCTCCATCAGACTGAACTGTGGGCAAGTCTGC  750

seq1  GTGGCATTTTCATCATTCATGACTGTCGTGGGAGGGTGCAGACCACTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATTTTCATCATTCATGACTGTCGTGGGAGGGTGCAGACCACTGTG  800

seq1  GGTGTTGTCACCCCTGGGCAGCGTGAGTTGTATGAGAGAGCAAGATGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTCACCCCTGGGCAGCGTGAGTTGTATGAGAGAGCAAGATGTAG  850

seq1  GACTAGAGAGATGGCTCTCAGTGTCCAGAGGACCTGGGCTGGATTCCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAGAGATGGCTCTCAGTGTCCAGAGGACCTGGGCTGGATTCCCAG  900

seq1  CACCTACAT-GGCAGCTCAAAACCATCTGAAATGGTTTTTAATTTAAAAA  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACATGGGCAGCTCAAAACCATCTGAAATGGTTTTTAATTTAAAAA  950

seq1  ATTAAAATGAGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGGCTGC  999
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTAAAATGAGGGCTGGAGAGATGGCTCAGCAGTT-AGAGCACTGGCTGC  999

seq1  GTTTCCAGAGGTCCTGAGTTCAACTCTTCACAACGACATGATACAG-ATG  1048
      | ||||||||||||||||||| |||| |||| |||||||||||||| |||
seq2  G-TTCCAGAGGTCCTGAGTTC-ACTC-TCAC-ACGACATGATACAGAATG  1045

seq1  GCT-CACAACCATCTGTAATGGGATCTGAGGTTCTCTTCTGTCTGGC-TC  1096
      ||| ||||| ||||||||  |||||||||||||||||||||||| || ||
seq2  GCTCCACAA-CATCTGTATGGGGATCTGAGGTTCTCTTCTGTCTTGCTTC  1094

seq1  TCTGTTCTGGCATGCAGGCAT-ACATGCAAATAGA  1130
      ||||||||||||||||| ||| |||||| ||||||
seq2  TCTGTTCTGGCATGCAGCCATAACATGCCAATAGA  1129