BAC Information

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BAC

Clone NameB6Ng01-286L11
Chromosome6 (Build37)
Map Location 63,476,986 - 63,614,009
singlet/doubletdoublet
Overlap geneGrid2
Upstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286L11.bB6Ng01-286L11.g
ACCGA084837GA084838
length1,1541,098
definitionB6Ng01-286L11.b B6Ng01-286L11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,476,986 - 63,477,594)(63,612,920 - 63,614,009)
sequence
gaattcaaagtaaataaatgtacaacattttcaaacatggaacacaatgt
aagcagtgctaagaggaaagttcatagctcaaagtaccttcataaaaaaa
ttagggagatcttatactagcaactaaacagcaaattggaaatctctaga
actaaaagaagcaaacacacctaatgggggtaaactgaagtctggctgaa
atcagtaaattagaaataagagaacaatacaaagaataaacaaaagttac
ttctttgagaaaaatcaacaaataaacaaacctgtaggcttatatttttc
aaatcctacttttaataaaagttcttaaatgcttcaacctaacttttatc
ccagcacctaccagaagtagtggaaaagacaattagggcctgtgttgaat
ttttctttagatcagatccaatcagagttttcaggatatcagcaattcag
ctcatatgaatcagtagagggcaaactcaatccacaagtaaaccttattc
ataaatcagtaataacaacttaattcagaagaaaccacaagtcttttcca
attggccagagtccatggaattgtctagaagttgtaggactaccattagt
tcttggttcatttctctctataaaatcataacaaataatgaccagcaaag
aatggcaaggtgaaccaataccataccgcaccatccatagtctgttggtt
tatatttataccctctccaaatattatattttctctcaagcatctctgat
agcaaaacatcaaataccccttttacaggctgcttccagaaaaacactat
gtgactgttctcaggaaaacattctcccacttttgcttcagcaaaaatac
tttctcattagacagtttccttgaaaaaaatcacatgatacaattgtatc
tccaaagaaaccagaaatttccactgtgaaaaacctttaaccaaagtaat
taaatggctgaaagaatatcccaaattcacaaaatcacaaatgaaaaatg
ggatatcacacacacaaggagaaacacacagatcataggtctaatttgac
aatattttcaatgtattttctttttttattttgggagcatgttgggctaa
tagcttttggaattcctccacagaaacacagggcaaatgtactgtttttg
catt

gaattcaccataagagaatcttttatgaatatgaaagtctaaattcaaat
aactagtactcacagaaaaatgccaggcatcacttcaaatgcgggtacct
ctagttttgcatgttggaatcaagtagttcctgggagcctcccagtcagc
cactctagtggaaaaaaagtgaacttctgattcaaggagagagcctaacc
cagagcagtactagacagtaacagaaaaaaaagatagaggaaaacatgtt
gcatccagctctggcctctacaaacatggccacagatacatgaacctgga
cactcatctataatgacttgggtgatactgatgtgttaatgcaggctcct
ctggagcagaatgtaggtattgagtgcatattgcaagtaagtaactaaga
attctttacttagtattcaatttttcaataaagctgaggtggttcaaaaa
taatgtttacatttaaaaaaataaaccaggtattctaatgaaatattggt
catattttattagaatatgaatgaaaggaataagagatttataattatat
agaaaaataatttagtattaagtgtgggaaggtaacctgtcaatggccat
atatattcaggagcactgcacacagagcccaggttcaaatcttggcatca
tggctgaactgaatttcatgggggtagctgctaaattttcttgaagttta
gtttactcatttaaaaaacaaaagttctgttttttattattgtttctgaa
agtgtactaagtattatatatgtgaatgcccactcataaggcattggccc
aaagaatttgtgatattactctatgtaattgctacagtaaatgtgccttg
tgtttcaattactttgttaaggaaaaagcactggagaattgttcagagca
atcacttaagtgagaagatctaactgaagaaaagtatgataaatgtagtg
aaataaaatccagaaagatgaattataaaataacaggttttgaattattt
aatacactattttaaaacaggaaagatgcatacagcctactgcacaactg
atgaaggagagaagaaatttgaatacatttcaaaaggttacgtttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63476986_63477594
seq2: B6Ng01-286L11.b_595_1198

seq1  ATTGGCCAGAGTCCATGGAATTGTCTAGAAGTTGTAGGACTACCATTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCAGAGTCCATGGAATTGTCTAGAAGTTGTAGGACTACCATTAGT  50

seq1  TCTTGGTTCATTTCTCTCTATAAAATCATAACAAATAATGACCAGCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTCATTTCTCTCTATAAAATCATAACAAATAATGACCAGCAAAG  100

seq1  AATGGCAAGGTGAACCAATACCATACCGCACCATCCATAGTCTGTTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAAGGTGAACCAATACCATACCGCACCATCCATAGTCTGTTGGTT  150

seq1  TATATTTATACCCTCTCCAAATATTATATTTTCTCTCAAGCATCTCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATACCCTCTCCAAATATTATATTTTCTCTCAAGCATCTCTGAT  200

seq1  AGCAAAACATCAAATACCCCTTTTACAGGCTGCTTCCAGAAAAACACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACATCAAATACCCCTTTTACAGGCTGCTTCCAGAAAAACACTAT  250

seq1  GTGACTGTTCTCAGGAAAACATTCTCCCACTTTTGCTTCAGCAAAAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTTCTCAGGAAAACATTCTCCCACTTTTGCTTCAGCAAAAATAC  300

seq1  TTTCTCATTAGACAGTTTCCTTGAAAAAAATCACATGATACAATTGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATTAGACAGTTTCCTTGAAAAAAATCACATGATACAATTGTATC  350

seq1  TCCAAAGAAACCAGAAATTTCCACTGTGAAAAACC-TTAACCAAAGTAAT  399
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCAAAGAAACCAGAAATTTCCACTGTGAAAAACCTTTAACCAAAGTAAT  400

seq1  TAAATGGCTGAAAGAATAT-CCAAATTCACAAAATCACAAATGAAAAATG  448
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAATGGCTGAAAGAATATCCCAAATTCACAAAATCACAAATGAAAAATG  450

seq1  GGATATCACAACACACAAGGAGGAAACACACAGAATCATTAGGTCTTAAT  498
      ||||||||| ||||||||||| ||||||||||| |||| |||||| ||||
seq2  GGATATCAC-ACACACAAGGA-GAAACACACAG-ATCA-TAGGTC-TAAT  495

seq1  TTGACAATATTTTCAATTGTAATTTTCTTTTTTATTTTGGAAGCATGTTG  548
      |||||||||||||||| |||| |||  ||||||||||||| |||||||||
seq2  TTGACAATATTTTCAA-TGTATTTTCTTTTTTTATTTTGGGAGCATGTTG  544

seq1  GGGCTTAATAGGTTTTGGAAATTCCT-CACAGAAACACAGGGAAAATGTA  597
      ||   |||||| |||||| ||||||| ||||||||||||||| |||||||
seq2  GG--CTAATAGCTTTTGG-AATTCCTCCACAGAAACACAGGGCAAATGTA  591

seq1  CTG-TTTTGCATT  609
      ||| |||||||||
seq2  CTGTTTTTGCATT  604


seq1: chr6_63612920_63614009
seq2: B6Ng01-286L11.g_62_1159 (reverse)

seq1  CAAAAACGTAA-CTTTTG-AATGTAT--CAATTTC-TCTCTCTTCCATCA  45
      ||||||||||| |||||| |||||||   |||||| |||||| | |||||
seq2  CAAAAACGTAACCTTTTGAAATGTATTCAAATTTCTTCTCTCCTTCATCA  50

seq1  G-TGTGCAGTA-GCTGTATTGCATCTTTCCCTGTTTTAAAATAGTGTA-T  92
      | ||||||||| |||||| ||||||||| ||||||||||||||||||| |
seq2  GTTGTGCAGTAGGCTGTA-TGCATCTTT-CCTGTTTTAAAATAGTGTATT  98

seq1  AAAT-ATTCAAAACCTG-TATTTTATAATTCATCTTTCTGGATTTTATTT  140
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAATAATTCAAAACCTGTTATTTTATAATTCATCTTTCTGGATTTTATTT  148

seq1  CACTACATTTATCATACTTTTCTTCAGTTAGATCTTCTCACTTAAGTGAT  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATTTATCATACTTTTCTTCAGTTAGATCTTCTCACTTAAGTGAT  198

seq1  TGCTCTGAACAATTCTCCAGTGCTTTTTCCTTAACAAAGTAATTGAAACA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAACAATTCTCCAGTGCTTTTTCCTTAACAAAGTAATTGAAACA  248

seq1  CAAGGCACATTTACTGTAGCAATTACATAGAGTAATATCACAAATTCTTT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCACATTTACTGTAGCAATTACATAGAGTAATATCACAAATTCTTT  298

seq1  GGGCCAATGCCTTATGAGTGGGCATTCACATATATAATACTTAGTACACT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAATGCCTTATGAGTGGGCATTCACATATATAATACTTAGTACACT  348

seq1  TTCAGAAACAATAATAAAAAACAGAACTTTTGTTTTTTAAATGAGTAAAC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAACAATAATAAAAAACAGAACTTTTGTTTTTTAAATGAGTAAAC  398

seq1  TAAACTTCAAGAAAATTTAGCAGCTACCCCCATGAAATTCAGTTCAGCCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCAAGAAAATTTAGCAGCTACCCCCATGAAATTCAGTTCAGCCA  448

seq1  TGATGCCAAGATTTGAACCTGGGCTCTGTGTGCAGTGCTCCTGAATATAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCAAGATTTGAACCTGGGCTCTGTGTGCAGTGCTCCTGAATATAT  498

seq1  ATGGCCATTGACAGGTTACCTTCCCACACTTAATACTAAATTATTTTTCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCATTGACAGGTTACCTTCCCACACTTAATACTAAATTATTTTTCT  548

seq1  ATATAATTATAAATCTCTTATTCCTTTCATTCATATTCTAATAAAATATG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTATAAATCTCTTATTCCTTTCATTCATATTCTAATAAAATATG  598

seq1  ACCAATATTTCATTAGAATACCTGGTTTATTTTTTTAAATGTAAACATTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATATTTCATTAGAATACCTGGTTTATTTTTTTAAATGTAAACATTA  648

seq1  TTTTTGAACCACCTCAGCTTTATTGAAAAATTGAATACTAAGTAAAGAAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAACCACCTCAGCTTTATTGAAAAATTGAATACTAAGTAAAGAAT  698

seq1  TCTTAGTTACTTACTTGCAATATGCACTCAATACCTACATTCTGCTCCAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTACTTACTTGCAATATGCACTCAATACCTACATTCTGCTCCAG  748

seq1  AGGAGCCTGCATTAACACATCAGTATCACCCAAGTCATTATAGATGAGTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCTGCATTAACACATCAGTATCACCCAAGTCATTATAGATGAGTG  798

seq1  TCCAGGTTCATGTATCTGTGGCCATGTTTGTAGAGGCCAGAGCTGGATGC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTCATGTATCTGTGGCCATGTTTGTAGAGGCCAGAGCTGGATGC  848

seq1  AACATGTTTTCCTCTATCTTTTTTTTCTGTTACTGTCTAGTACTGCTCTG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTTTCCTCTATCTTTTTTTTCTGTTACTGTCTAGTACTGCTCTG  898

seq1  GGTTAGGCTCTCTCCTTGAATCAGAAGTTCACTTTTTTTCCACTAGAGTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGCTCTCTCCTTGAATCAGAAGTTCACTTTTTTTCCACTAGAGTG  948

seq1  GCTGACTGGGAGGCTCCCAGGAACTACTTGATTCCAACATGCAAAACTAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGGGAGGCTCCCAGGAACTACTTGATTCCAACATGCAAAACTAG  998

seq1  AGGTACCCGCATTTGAAGTGATGCCTGGCATTTTTCTGTGAGTACTAGTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCCGCATTTGAAGTGATGCCTGGCATTTTTCTGTGAGTACTAGTT  1048

seq1  ATTTGAATTTAGACTTTCATATTCATAAAAGATTCTCTTATGGTGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATTTAGACTTTCATATTCATAAAAGATTCTCTTATGGTGAATTC  1098


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