BAC Information

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BAC

Clone NameB6Ng01-286P02
Chromosome6 (Build37)
Map Location 102,581,902 - 102,582,926
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666084, Cntn3, EG666123
Downstream geneChl1, LOC666141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286P02.bB6Ng01-286P02.g
ACCGA085003GA085004
length1,1731,019
definitionB6Ng01-286P02.b B6Ng01-286P02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgctggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaactcagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcttgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaag
ggacccagatgtagctgtctcttgtgagactatgcccgggccctagcaaa
cacagaagtggatgcccacagtcagctaatggatggatcacaggctccca
atggaggaacctagagaaagtacccaagagctaaagggatctgcacccta
taggtgatcacattatgactacagtaccccggagctctgactctagctgc
atatgtatcaagatgcctagtcgccatccttgaaagaaagccatgacaca
caaccttatatgccagatacaggcacgctatgctaaatgggatgcggtag
ggtcttgggacaccccctctcat
gaattcttgatactttcagttccacagaatctcccttttccagtccactg
agtatactcactggctactttgatgagagtggctaagagtttgcaacaat
tccttaaaaacccttggtctaggtgaaaaatgtcctaatttagccatgta
tcatgtaaacactatcaagacctcatctgtaccacattcacattcttttt
tgcttaccctattactgatgcttgtctccttgaagacaacttatctatgt
cagagaagcaatgaattaaggttttccctttacgatagaggataaaacaa
atatatgtctaaagttaaatgatacatttttgttccatatccttgatgac
aaacagcattaattgagctaagtgagaatctatctatggtcatatctgtc
aaaattctacttcaatagcaagactgaactttgaaactgatcagctaact
gagtcatctagttggtgaatagtaatggtgttctctgttcctcctactct
ttgtagaaatttctaaattaaatatgaatacactttcttgtctagggaat
ggaaatcagttcctctgagaatagactaggattagaacatcacttctgat
gagtagtgtaaggtaaggaagatgaataatttgacttggatgaacatgga
accagtactctaagcatcaactgacattaaaatgtgtagcgatcactgat
aatctacagtgacatcatacctcccctgctctgataacatagctaaggca
cctcacgttcctcatgcccatctccaaaccaataaccctagtttaattcc
tagaaaacatcaaacagactatgggcattctctaaaatagttgaacagta
gtattttatactgtcaatccaactgaaaccaaggaagtttgttgagttgt
cataggccagagaagactgaaggcagatgtgcttcttgcatccaatgttt
gttcacagagatacaaagatatattaaggagaggcttgacattaaaacaa
catcgtgatcatttgatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_102581902_102582926
seq2: B6Ng01-286P02.g_68_1086

seq1  GAATTCTTGATACTTTCAGTTCCACAGAATCTCCCTTTTCCAGTCCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATACTTTCAGTTCCACAGAATCTCCCTTTTCCAGTCCACTG  50

seq1  AGTATACTCACTGGCTACTTTGATGAGAGTGGCTAAGAGTTTGCAACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACTCACTGGCTACTTTGATGAGAGTGGCTAAGAGTTTGCAACAAT  100

seq1  TCCTTAAAAACCCTTGGTCTAGGTGAAAAATGTCCTAATTTAGCCATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAAAACCCTTGGTCTAGGTGAAAAATGTCCTAATTTAGCCATGTA  150

seq1  TCATGTAAACACTATCAAGACCTCATCTGTACCACATTCACATTCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAAACACTATCAAGACCTCATCTGTACCACATTCACATTCTTTTT  200

seq1  TGCTTACCCTATTACTGATGCTTGTCTCCTTGAAGACAACTTATCTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACCCTATTACTGATGCTTGTCTCCTTGAAGACAACTTATCTATGT  250

seq1  CAGAGAAGCAATGAATTAAGGTTTTCCCTTTACGATAGAGGATAAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGCAATGAATTAAGGTTTTCCCTTTACGATAGAGGATAAAACAA  300

seq1  ATATATGTCTAAAGTTAAATGATACATTTTTGTTCCATATCCTTGATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTCTAAAGTTAAATGATACATTTTTGTTCCATATCCTTGATGAC  350

seq1  AAACAGCATTAATTGAGCTAAGTGAGAATCTATCTATGGTCATATCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCATTAATTGAGCTAAGTGAGAATCTATCTATGGTCATATCTGTC  400

seq1  AAAATTCTACTTCAATAGCAAGACTGAACTTTGAAACTGATCAGCTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTACTTCAATAGCAAGACTGAACTTTGAAACTGATCAGCTAACT  450

seq1  GAGTCATCTAGTTGGTGAATAGTAATGGTGTTCTCTGTTCCTCCTACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATCTAGTTGGTGAATAGTAATGGTGTTCTCTGTTCCTCCTACTCT  500

seq1  TTGTAGAAATTTCTAAATTAAATATGAATACACTTTCTTGTCTAGGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAATTTCTAAATTAAATATGAATACACTTTCTTGTCTAGGGAAT  550

seq1  GGAAATCAGTTCCTCTGAGAATAGACTAGGATTAGAACATCACTTCTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCAGTTCCTCTGAGAATAGACTAGGATTAGAACATCACTTCTGAT  600

seq1  GAGTAGTGTAAGGTAAGGAAGATGAATAATTTGACTTGGATGAACATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGTAAGGTAAGGAAGATGAATAATTTGACTTGGATGAACATGGA  650

seq1  ACCAGTACTCTAAGCATCAACTGACATTAAAATGTGTAGCGATCACTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTACTCTAAGCATCAACTGACATTAAAATGTGTAGCGATCACTGAT  700

seq1  AATCTACAGTGACATCATACCTCCCCTGCTCTGATAACATAGCTAAGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACAGTGACATCATACCTCCCCTGCTCTGATAACATAGCTAAGGCA  750

seq1  CCTCACGTTCCTCATGCCCATCTCCAAACCAATAACCCTAGTTTAATTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACGTTCCTCATGCCCATCTCCAAACCAATAACCCTAGTTTAATTCC  800

seq1  TAGAAAACATCAAACAGACTATGGGCATTCTCTAAAATAGTTGAACAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACATCAAACAGACTATGGGCATTCTCTAAAATAGTTGAACAGTA  850

seq1  GTATTTTATACTGTCAATCCAACTGAAACCAAGGAAGTTTGTTGAGTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTATACTGTCAATCCAACTGAAACCAAGGAAGTTTGTTGAGTTGT  900

seq1  CATAGGCCAGAGAAGACTGAAGGCAGATGTGCTTCTTGCATCCAATGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCCAGAGAAGACTGAAGGCAGATGTGCTTCTTGCATCCAATGTTT  950

seq1  GTTCACAGAGATACAAAGATAATATTAAGGGAAGAAGCCTTGACATTAAA  1000
      |||||||||||||||||||| |||||||||  || || ||||||||||||
seq2  GTTCACAGAGATACAAAGAT-ATATTAAGG--AG-AGGCTTGACATTAAA  996

seq1  ACAACATTCGTGATCATTTTGATAC  1025
      |||||| ||||||||| ||||||||
seq2  ACAACA-TCGTGATCA-TTTGATAC  1019