BAC Information

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BAC

Clone NameB6Ng01-287B02
Chromosome6 (Build37)
Map Location 138,839,480 - 139,006,451
singlet/doubletdoublet
Overlap genenone
Upstream gene9830102E05Rik, Mgst1, Lmo3, Igbp1b, EG668196
Downstream geneEG632971, LOC100043898, Pik3c2g, Plcz1, Capza3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287B02.bB6Ng01-287B02.g
ACCGA085095GA085096
length1,016897
definitionB6Ng01-287B02.b B6Ng01-287B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,005,886 - 139,006,451)(138,839,480 - 138,840,371)
sequence
gaattcaaaacctagcatgaccttcttttatgcataatcttttgttggct
tccctctatttaagataaatagaggactaatatccaaaacatacaaagaa
ctcaagaaattagactccagagatccaaataatccaattataaaatgggg
tacagagctaaacaaagaattctcagctgaggaatatcaaacggctgaga
agtacctaaagacattttcaatgtccttaatcatcaggaaaatgcaaatc
aaaatgaccctgagattccaccttacaccaatcagaatggctaacatcaa
aaactcaggtgacaacagatgctggtgaggatgtggagaaagaggaacat
tgctggtgggattataagctgctacaaccactctgtaaatcagtctggcg
gtttctcagaaaattggaaatagttctacctgaggacacagctataccat
tcctgggcatatatccaaaagatgatccaacatttaacaaggacacatgc
tcccctatgttcatagcagccttatttataatagctagaaacaccccaga
tgtccctcaacagaggaatggatatataaaatatggtacatttactcaat
ggagtactactcagctaataaaaacaatgacttcatgaaacctgcaggta
aatgggtgtaacttgaaaatatcatgttgagtgagataaccagtcacaaa
agaacacacatggtatgtactcaatgataagtgggctaccttcccaccag
ggacttcaaaagttcattgaacattcaaagagttaactgcaaatattcat
cacaaccttactttctaatagcataaagtatttggttaataagtgatcaa
tagtatgaataaatgagtgagaaaaaaacaccaagctctaaaataaaaat
acactgcaacttgttttcgttagagaaaggaacagttacctagaaattgg
acagtgcctctgtgagcttcattggttacttctcagaagacagtaattct
gtttagtcctttttgg
gaattccatcccatcactgtttgatattagtatgtgggagagggctggtc
atggggtgggttggagggattattattccccccactaatattgaagcaca
ccatgaggaatttaaacagtgggcaaaaactttcatagggcgagagaaga
ggcacaagggagggctacaattcaccttgaatttctctgactcaattatt
ttttcatttttttcaattaatttttatgcaaacattttactttcctacag
ttcaaacatcacaagcaatttaaattctttttaatgttagtttatggaca
tggtttagaagtgagaagtattatattctgatattatctaaggccacagg
atgttttattttctgtaactctgattaaatattatatggtggctaacatc
ttcctttactttaagttttattgtgaactgagggaaataatgtaatggtg
ttaatgtaataaaggaactggcactgttattggactatttggagtagatt
gagaacattttgtacttatgagacatatataaagcctgggacatggaaga
gatgcaatataacgagttacaaacattttgtgcacaatccaaagatttct
atcttgttaacttaatttcccatgtaatagttaggagatgagtgagaacc
ttctagaactggggcttggtgtgtgtctttagatctcttagatagcatcc
tcatgagggagcatgaagtcctttcttggggacaatgtgctttctttctc
gatcctggtgtgctcacagcaatgcgattatatccactgagccctcaaca
aaaccaattctatgcccaggatcatgcaactgaacttcttaagctgctgt
tacagaaccatacttttcttcataaaagtaatgctgtaataatatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_139005886_139006451
seq2: B6Ng01-287B02.b_49_614 (reverse)

seq1  CCTCTGTTGAGGGACATCTGGGGTGTTTCTAGCTATTATAAATAAGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTGAGGGACATCTGGGGTGTTTCTAGCTATTATAAATAAGGCTG  50

seq1  CTATGAACATAGGGGAGCATGTGTCCTTGTTAAATGTTGGATCATCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAACATAGGGGAGCATGTGTCCTTGTTAAATGTTGGATCATCTTTT  100

seq1  GGATATATGCCCAGGAATGGTATAGCTGTGTCCTCAGGTAGAACTATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATATGCCCAGGAATGGTATAGCTGTGTCCTCAGGTAGAACTATTTC  150

seq1  CAATTTTCTGAGAAACCGCCAGACTGATTTACAGAGTGGTTGTAGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCTGAGAAACCGCCAGACTGATTTACAGAGTGGTTGTAGCAGCT  200

seq1  TATAATCCCACCAGCAATGTTCCTCTTTCTCCACATCCTCACCAGCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCCCACCAGCAATGTTCCTCTTTCTCCACATCCTCACCAGCATCT  250

seq1  GTTGTCACCTGAGTTTTTGATGTTAGCCATTCTGATTGGTGTAAGGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCACCTGAGTTTTTGATGTTAGCCATTCTGATTGGTGTAAGGTGGA  300

seq1  ATCTCAGGGTCATTTTGATTTGCATTTTCCTGATGATTAAGGACATTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGGGTCATTTTGATTTGCATTTTCCTGATGATTAAGGACATTGAA  350

seq1  AATGTCTTTAGGTACTTCTCAGCCGTTTGATATTCCTCAGCTGAGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTTAGGTACTTCTCAGCCGTTTGATATTCCTCAGCTGAGAATTC  400

seq1  TTTGTTTAGCTCTGTACCCCATTTTATAATTGGATTATTTGGATCTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAGCTCTGTACCCCATTTTATAATTGGATTATTTGGATCTCTGG  450

seq1  AGTCTAATTTCTTGAGTTCTTTGTATGTTTTGGATATTAGTCCTCTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAATTTCTTGAGTTCTTTGTATGTTTTGGATATTAGTCCTCTATTT  500

seq1  ATCTTAAATAGAGGGAAGCCAACAAAAGATTATGCATAAAAGAAGGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAATAGAGGGAAGCCAACAAAAGATTATGCATAAAAGAAGGTCAT  550

seq1  GCTAGGTTTTGAATTC  566
      ||||||||||||||||
seq2  GCTAGGTTTTGAATTC  566

seq1: chr6_138839480_138840371
seq2: B6Ng01-287B02.g_66_962

seq1  GAATTCCATCCCATCACTGTTTGATATTAGTATGTGGGAGAGGGCTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCCATCACTGTTTGATATTAGTATGTGGGAGAGGGCTGGTC  50

seq1  ATGGGGTGGGTTGGAGGGATTATTATTCCCCCCACTAATATTGAAGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTGGGTTGGAGGGATTATTATTCCCCCCACTAATATTGAAGCACA  100

seq1  CCATGAGGAATTTAAACAGTGGGCAAAAACTTTCATAGGGCGAGAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGGAATTTAAACAGTGGGCAAAAACTTTCATAGGGCGAGAGAAGA  150

seq1  GGCACAAGGGAGGGCTACAATTCACCTTGAATTTCTCTGACTCAATTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGGGAGGGCTACAATTCACCTTGAATTTCTCTGACTCAATTATT  200

seq1  TTTTCATTTTTTTCAATTAATTTTTATGCAAACATTTTACTTTCCTACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTTTTTCAATTAATTTTTATGCAAACATTTTACTTTCCTACAG  250

seq1  TTCAAACATCACAAGCAATTTAAATTCTTTTTAATGTTAGTTTATGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACATCACAAGCAATTTAAATTCTTTTTAATGTTAGTTTATGGACA  300

seq1  TGGTTTAGAAGTGAGAAGTATTATATTCTGATATTATCTAAGGCCACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAGAAGTGAGAAGTATTATATTCTGATATTATCTAAGGCCACAGG  350

seq1  ATGTTTTATTTTCTGTAACTCTGATTAAATATTATATGGTGGCTAACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTATTTTCTGTAACTCTGATTAAATATTATATGGTGGCTAACATC  400

seq1  TTCCTTTACTTTAAGTTTTATTGTGAACTGAGGGAAATAATGTAATGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTACTTTAAGTTTTATTGTGAACTGAGGGAAATAATGTAATGGTG  450

seq1  TTAATGTAATAAAGGAACTGGCACTGTTATTGGACTATTTGGAGTAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTAATAAAGGAACTGGCACTGTTATTGGACTATTTGGAGTAGATT  500

seq1  GAGAACATTTTGTACTTATGAGACATATATAAAGCCTGGGACATGGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATTTTGTACTTATGAGACATATATAAAGCCTGGGACATGGAAGA  550

seq1  GATGCAATATAACGAGTTACAAACATTTTGTGCACAATCCAAAGATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAATATAACGAGTTACAAACATTTTGTGCACAATCCAAAGATTTCT  600

seq1  ATCTTGTTAACTTAATTTCCCATGTAATAGTTAGGAGATGAGTGAGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTAACTTAATTTCCCATGTAATAGTTAGGAGATGAGTGAGAACC  650

seq1  TTCTAGAACTGGGGCTTGGTGTGTGTCTTTAGATCTCTTAGATAGCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAACTGGGGCTTGGTGTGTGTCTTTAGATCTCTTAGATAGCATCC  700

seq1  TCATGAGGGAGCATGAAG--CCTTCTTGGGGACAATGTGCTTTC-TTCTC  747
      ||||||||||||||||||  | |||||||||||||||||||||| |||||
seq2  TCATGAGGGAGCATGAAGTCCTTTCTTGGGGACAATGTGCTTTCTTTCTC  750

seq1  GATCCTGGTGTGCTCACAGCAATGCGATTATATCCACTGAGCCCTCAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGGTGTGCTCACAGCAATGCGATTATATCCACTGAGCCCTCAACA  800

seq1  AAACCAAATCTATGCCCAGGATCATGCAACTGAACTTCTTAAGCTGCTGT  847
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATTCTATGCCCAGGATCATGCAACTGAACTTCTTAAGCTGCTGT  850

seq1  TACAGAACCATAC-TTTCTTCATAAAAGT-ATGCTGTATAAATATGT  892
      ||||||||||||| ||||||||||||||| ||||||||  |||||||
seq2  TACAGAACCATACTTTTCTTCATAAAAGTAATGCTGTAATAATATGT  897