BAC Information

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BAC

Clone NameB6Ng01-287D08
Chromosome6 (Build37)
Map Location 73,043,151 - 73,044,279
singlet/doubletsinglet
Overlap geneDnahc6
Upstream geneSt3gal5, Atoh8, Sftpb, Usp39, 0610030E20Rik, Tmem150, 2500002L14Rik, Vamp5, Vamp8, Ggcx, Mat2a, Sh2d6, Capg, Rbed1, Retsat, Tgoln1, LOC100038890, Tcf3, Kcmf1, Tmsb10
Downstream geneSuclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287D08.bB6Ng01-287D08.g
ACCGA085195GA085196
length7091,124
definitionB6Ng01-287D08.b B6Ng01-287D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttataggagaaagtcgaatttctctcagaaacacttaaacaaa
tgtttaactttcttagccatcagggagatgcaagtcaaaaccactttgag
attctatcttaaatctgtcaggatgcccaaggtcaatgatacaagaacag
ttggtgctggcaaggaagtgaaacaggtggcacactcctctattgctggt
tgggaagtcaaactactattcatgggcatataccaaaaggatacttcata
ttaccacgtggacacttgctcaatcatattcattgctgctctattcagaa
tagtcagaaattggaaataacctagatgattctcaacagaagaatggata
aggaaaatatacatttacacaatggagtatttctgagctcttacaaaaac
aaacaaagacatcatcaaaattgcaggcaaatagatggaactagaaaaaa
atcattctggatgaggtaagccagacccagaaagataaatatgtatttac
ttctatctgaatattagccgttaaataaataatgaccaagctacagtcct
taagtacagaggaagggaccagaggagacacacggatctccctgggaggg
gaaacagaatagattttataaatggactgtatctcggggggagggaaaga
tgacaacaggaggctcaggtaagaaggaggagaggggataggtttgggaa
agggaatga
gaattcagttgtcctatctttggttttttgaagcaagggtgaatttagtc
acattgacttctgtctggggtggggggactactataaaactgtcttccag
agatgatgtggctttgtattcatgactcacacagcagctttggctatctg
cacaagtcctgcatgtgttctcgccagtcaatgttccagcatggataggg
agggggcccatgaagccatacccttgctatgaagctactgatatttgatg
gcccatgagattgggtgagtcagctttttccaagaggatagcccctagta
ggttgcacatgattcagtagatggccctacatcgtgcacacatgggagac
actaaacgtactcggtgggttataataagcgacaagaggaggacatgaag
tgggggggggcacatgtgacagaggtcctgggggatttggaggacaatgt
aagcagatgcaattctcaaagaataaaatatacaatttctgttaaaaaag
agtctgtttagactttcttaggccttcttgagattttcttttagatttga
ataggtaatttgtacattatgaaatgggcttcttctctcataattagtga
aagtattacaagtatttattgtcttgtttatgctaagtcttttgctactc
atcactctgcagattttccctcagaacaaatgtatttatattcagattat
tgcttctagatagagatttaacattttttactaaattttaatgtattcat
gtgtgtgtgtgtgcgcatgcgcatggaggtcagaggataactttcagggt
gcctgcctctcctaccatgtgaggcctggggatcaatcccagggttcctt
ttacctgctgagtagcagacttttcccccacactctgccaatgccatatc
aataatttaaaaagtaaagtttttttttaatggtgtgtgtgtgcatgcat
gcgtgcatgtatgtgtgtatgaaagctcttgctacagagtttaaatcctc
ctcattattgccacttgaatactactgagttcttagagtattgactgaaa
ttagctctagtctgatgcagtacttttacatagaagagtttctataatac
ttccgaatagattattactgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_73043151_73044279
seq2: B6Ng01-287D08.g_67_1190

seq1  GAATTCAGTTGTCCTATCTTTGGTTTTTTGAAGCAAGGGTGAATTTAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTCCTATCTTTGGTTTTTTGAAGCAAGGGTGAATTTAGTC  50

seq1  ACATTGACTTCTGTCTGGGGTGGGGGGACTACTATAAAACTGTCTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGACTTCTGTCTGGGGTGGGGGGACTACTATAAAACTGTCTTCCAG  100

seq1  AGATGATGTGGCTTTGTATTCATGACTCACACAGCAGCTTTGGCTATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGTGGCTTTGTATTCATGACTCACACAGCAGCTTTGGCTATCTG  150

seq1  CACAAGTCCTGCATGTGTTCTCGCCAGTCAATGTTCCAGCATGGATAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCCTGCATGTGTTCTCGCCAGTCAATGTTCCAGCATGGATAGGG  200

seq1  AGGGGGCCCATGAAGCCATACCCTTGCTATGAAGCTACTGATATTTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCCCATGAAGCCATACCCTTGCTATGAAGCTACTGATATTTGATG  250

seq1  GCCCATGAGATTGGGTGAGTCAGCTTTTTCCAAGAGGATAGCCCCTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGAGATTGGGTGAGTCAGCTTTTTCCAAGAGGATAGCCCCTAGTA  300

seq1  GGTTGCACATGATTCAGTAGATGGCCCTACATCGTGCACACATGGGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCACATGATTCAGTAGATGGCCCTACATCGTGCACACATGGGAGAC  350

seq1  ACTAAACGTACTCGGTGGGTTATAATAAGCGACAAGAGGAGGACATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACGTACTCGGTGGGTTATAATAAGCGACAAGAGGAGGACATGAAG  400

seq1  TGGGGGGGGGCACATGTGACAGAGGTCCTGGGGGATTTGGAGGACAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGGGGCACATGTGACAGAGGTCCTGGGGGATTTGGAGGACAATGT  450

seq1  AAGCAGATGCAATTCTCAAAGAATAAAATATACAATTTCTGTTAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGATGCAATTCTCAAAGAATAAAATATACAATTTCTGTTAAAAAAG  500

seq1  AGTCTGTTTAGACTTTCTTAGGCCTTCTTGAGATTTTCTTTTAGATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTTAGACTTTCTTAGGCCTTCTTGAGATTTTCTTTTAGATTTGA  550

seq1  ATAGGTAATTTGTACATTATGAAATGGGCTTCTTCTCTCATAATTAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAATTTGTACATTATGAAATGGGCTTCTTCTCTCATAATTAGTGA  600

seq1  AAGTATTACAAGTATTTATTGTCTTGTTTATGCTAAGTCTTTTGCTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTACAAGTATTTATTGTCTTGTTTATGCTAAGTCTTTTGCTACTC  650

seq1  ATCACTCTGCAGATTTTCCCTCAGAACAAATGTATTTATATTCAGATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCTGCAGATTTTCCCTCAGAACAAATGTATTTATATTCAGATTAT  700

seq1  TGCTTCTAGATAGAGATTTAACA-TTTTTACTAAATTTTAATGTATTCAT  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCTTCTAGATAGAGATTTAACATTTTTTACTAAATTTTAATGTATTCAT  750

seq1  GTGTGTGTGTGTGCGCATGCGCATGGAGGTCAGAGGATAACTTTCAGGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGCGCATGCGCATGGAGGTCAGAGGATAACTTTCAGGGT  800

seq1  GCCTGCCTCTCCTACCATGTGAGGCCTGGGGATCAATCCCA-GGTTCCTT  848
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCCTGCCTCTCCTACCATGTGAGGCCTGGGGATCAATCCCAGGGTTCCTT  850

seq1  TTACCTGCTGAGTAGCAGACTTTT-CCCCACACTCTGCCAATGCCATATC  897
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTACCTGCTGAGTAGCAGACTTTTCCCCCACACTCTGCCAATGCCATATC  900

seq1  -ATAATTTAAAAAGTAAAG-TTTTTTTTAATGGTGTGTGTGTGCATGCAT  945
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATAATTTAAAAAGTAAAGTTTTTTTTTAATGGTGTGTGTGTGCATGCAT  950

seq1  GCGTGCATGTATGTGTGTATGAAAGCCTCCTGCTACAGAGTTTAAAATCT  995
      ||||||||||||||||||||||||| ||| ||||||||||||||||  ||
seq2  GCGTGCATGTATGTGTGTATGAAAG-CTCTTGCTACAGAGTTTAAATCCT  999

seq1  -CTCATATTGGCCAC-TGAATACTACTGAGTTC-TAGAGTTAATTTGACC  1042
       |||||  | ||||| ||||||||||||||||| ||||||    |||| |
seq2  CCTCATTATTGCCACTTGAATACTACTGAGTTCTTAGAGT---ATTGA-C  1045

seq1  TGAAATTTAGCTCTTAGTCTTGGATGCAGTAATTTTTACATAG-AGAGTT  1091
      ||||| ||||||| ||||||  |||||||| | |||||||||| ||||||
seq2  TGAAA-TTAGCTC-TAGTCT--GATGCAGT-ACTTTTACATAGAAGAGTT  1090

seq1  TCTATATATACTTCCAAATAGAGTTTATTACTGTGGTG  1129
      |||||| |||||||| ||||||  ||||||||| ||||
seq2  TCTATA-ATACTTCCGAATAGA--TTATTACTG-GGTG  1124