BAC Information

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BAC

Clone NameB6Ng01-287N01
Chromosome6 (Build37)
Map Location 67,324,576 - 67,324,699
singlet/doubletsinglet
Overlap geneIl12rb2
Upstream geneTpm3-rs3, LOC627751, Mad2l1, V1rc15, LOC100041941, Aurkb-ps, V1rc14, LOC546901, V1rc12, LOC627833, V1rc11, V1rc10, LOC100042816, LOC546902, V1rc13, EG546903, LOC100042008, 4930597O21Rik, Gng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318, Serbp1
Downstream geneLOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igk, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287N01.bB6Ng01-287N01.g
ACCGA085637GA085638
length1,2261,026
definitionB6Ng01-287N01.b B6Ng01-287N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcaacttttaacaatgttacagggacagtaactctcaaatta
tttaaaaaatatatgaaccaaattagcactctcagcctccttcaatgaag
tcagtatcactgtaattactcaaactaggaaatagtggtggtggaaagga
aaaggctacaagctaatattcatgaggaatatagactcaaaatattcaac
aaaaaaaacatgcaaacaaaattcaggcctacataaaaaagattatctac
aatgctaatttgtctttagtcttgaaatgcaaggatgatttgataaatga
aagtaattatatgtaataagccaaatgagtcgacttaaaacatatattga
tttcctcaatatatacagaaagatcatttaacaaaatccaatatccattc
aggtactacagaatgtacaactagaggtaacatttgcaaatattccaaaa
gatctgtatgattaacttatagccaatatcatctgaaatataaaaatgct
tgcagaaatctgactgtagtcaggagtgaaacaaggatagcgagtatcct
ttgtaatatagcttttgaaataatatttgaatcaataaggcaagaagaga
aatttatagggatacaaataggaaaagatgaagtcatactatacctttct
gtaaatagtaagatattagacattaaaaataccaacaaatcaatcagaaa
acttgtaggaatgataaataattcagcaacattgcggaagacaacatcaa
tttacatgtcaatcgcatttctgaacaccaataacaaaccaacagagcat
agacaaattcctattcacaatagacttaaataaaaatagatctaggaata
aacctaaggaagattgtaaagacagttcattgaaacaaagacacagtgaa
aactagaggaaatgaaccaaatggatttgactatatatcaaacttttacc
ctcaaagaaaagaaatacataatattctgtcaaaaaaacaacctcaaaaa
aacaggcctcaacagatcaacagaatacaaaaagattaaagtaattccca
tgcatcctatcagatcaccatgaactatggctagaacctcattaacaaca
aaaacagcaaggtgaacccacaatacctaatgaaactgaacagctctctt
accttcatgaatatcttggtcatagagcacttacggaacattaatttgag
acactttccgtggaaattctcaaatg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tccaatatccttaatcatcagggaaatgcaaatccaaaaaaccctgagat
tccacctcacaccagtcagaacggctaagatcaaaaattcaggtgccagc
agatgttgacgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagacttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatactactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg
gaattctactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattctcaaa
ggaactcacacaatatgtactcactgataagtggatattagccaaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaccacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatctagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatctaaa
ggacccagatgtagctgtctcttgtgagactatgccggggactagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggctccca
atggagagctagagaaagtaccccagagctaaagggatctgcaccctata
gtggacacattatgactaacagtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_67324576_67324699
seq2: B6Ng01-287N01.g_976_1091 (reverse)

seq1  GGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCT  50
      |||||| ||||| |||||||||   |||| |||||||| |||||||||||
seq2  GGTACT-GTTAG-TCATAATGT--GTCCA-CTATAGGG-TGCAGATCCCT  44

seq1  TTAGCTCCTTGGGTGCTTTCTCTAGCTTCTCCATTGGGAGCCCTGTGATC  100
      |||||| || |||| ||||||||||| |||||||||||||||||||||||
seq2  TTAGCT-CTGGGGTACTTTCTCTAGC-TCTCCATTGGGAGCCCTGTGATC  92

seq1  CATCCAATAGCTGACTGTGAGCAT  124
      ||||||||||||||||||||||||
seq2  CATCCAATAGCTGACTGTGAGCAT  116