BAC Information

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BAC

Clone NameB6Ng01-287O16
Chromosome6 (Build37)
Map Location 133,326,500 - 133,327,687
singlet/doubletsinglet
Overlap genenone
Upstream geneEG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
Downstream geneEG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6, LOC100043660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287O16.bB6Ng01-287O16.g
ACCGA085715GA085716
length1,1681,180
definitionB6Ng01-287O16.b B6Ng01-287O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagaagatgcaaaagaaggattgaagtaggcagagggcttaa
gaaaatgacccacagaatcaactaaccagggcccatagaggctctcagag
actgacacaacaatatcagacatagcattgttctgcactaagccttctga
atacatagtgaggttgtttagcttgtaggttttgtgggactcctaatagt
ttggtagaaaacttacatgaatagattgttatcactggaagtcctggtct
tttatggagaaaaaaaaaagaaaggaaagcagtgattctggaataaaggg
agctcaaggggtgtaaaaactgggagaaggggacagaatggagactatgg
tctgtatggatttaaagagaataaagtaaagacaaagaacagagaataaa
agaagttgaaggttgtctacagttagaacctgggcttcataggaccctat
caaaactgcaaataataaaaataatttaatctggctggagagatagctca
gtgatgaaagccactgactgcttttccataggttaagttcaaatccaagc
aaccacatgctgacttagaaaccatctgtaatggaatctgataccctctt
ctgatgtactcatatatatgaaatatataaattttaagatatcatatcag
caccaaaaagttaatctatgccatagcatgatatcagaaaatgaatagct
gtaggaaatccttctggagaaatggtcaagaatttttctctctttagtag
atttatttcaagtaagagagaggcatgaagaaagtcatagtaattaaaaa
gaaggaattcaattataagtttttcaaattcacatcaatagaactaagtt
gaaatcaacacatctatcatttatgtacgagttgcataattaaatattga
caagatttttagtaatgttaagaaaagtggaacactttactttagatcca
aaaatcggaacagaaaatgcaacatggtactagaaaagtacaaatctgac
agatgactatgatgtacagtgttggaaactcagttttcgacttcatcatt
atcccccccccaacaacacaccacaacctttctttaaactgggaaaactc
acagagagtgaagtttatacaatgagtagactagactcaggttagaatca
tctggttaccaggggtct
gaattccacacttgagtatacatagctacagtcatatgacatttgataaa
gatgtcaaaaatgcacaaggcagggatgacatcattccccaaaaatgatc
ttacaaaaattgaatgtacacatgcagaaaaatgatagccacatttatca
ctctacacataaaatcaaagaaaaatgtgtaaaagttggtgatgtgaaac
ctaaaggcctgaaactattagaaggaaacatcagcagtgctgaatgaaga
tccaagtgtaggaaaggtctttaagaatgagatgtcattcagagaggact
taaggctaagaattgacaaacaggatcactaaaactagaaatatgtgcag
ctaatgaaatatttagacaagtaaagataagtccaaagggtaggggagaa
tacttgctagttacacttctgataagtgattaatatccagaatacacaga
gaagtcattagaaagaaacaatccagaggtctaatgactcaaatgaaaac
tgaccaaggatctatagagaagattcaaaaagagaaattagaaatggcaa
acattgaaggaagtatacaacattcttagaaggtacagaattacctgtca
gaatggtgaagattaagaaaagagcagactacagatgactgtctctattt
ctttaggtgacagtttagtcatcattctgttcctgatttaaatttggtac
ctggtacctgtctagaaaattgttcatttcaaccaggtttatccttttgg
ttatgtataggcttttgtagtaggatctgatgatttttggatttcctcag
attctattgttatatctcccctttcatgcctgattttgttaattaggata
ctgtccctgtgccctctagttagtctggcaaggggatcatctaacttgtt
gattttctcaaagaaccagctcctggtttggtttgattctttgtatagat
ctttttttgtatagtccacttggtggatttcagccctgagtttgatattt
cctgctgtctactctctagtgaatttgctacctttattctacaggttcaa
gtttgtttggtgagctgcctagtatatgctagcctccagccttctctttt
gagcactcagaagctttgagctcacttaggactgccgtcatcctgtcaat
aattgtagagaataggttgggtttccttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133326500_133327687
seq2: B6Ng01-287O16.b_49_1216

seq1  GAATTCTTCAGAAGATGCAAAAGAAGGATTGAAGTAGGCAGAGGGCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAAGATGCAAAAGAAGGATTGAAGTAGGCAGAGGGCTTAA  50

seq1  GAAAATGACCCACAGAATCAACTAACCAGGGCCCATAGAGGCTCTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGACCCACAGAATCAACTAACCAGGGCCCATAGAGGCTCTCAGAG  100

seq1  ACTGACACAACAATATCAGACATAGCATTGTTCTGCACTAAGCCTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACACAACAATATCAGACATAGCATTGTTCTGCACTAAGCCTTCTGA  150

seq1  ATACATAGTGAGGTTGTTTAGCTTGTAGGTTTTGTGGGACTCCTAATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGTGAGGTTGTTTAGCTTGTAGGTTTTGTGGGACTCCTAATAGT  200

seq1  TTGGTAGAAAACTTACATGAATAGATTGTTATCACTGGAAGTCCTGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGAAAACTTACATGAATAGATTGTTATCACTGGAAGTCCTGGTCT  250

seq1  TTTATGGAGAAAAAAAAAAGAAAGGAAAGCAGTGATTCTGGAATAAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGAGAAAAAAAAAAGAAAGGAAAGCAGTGATTCTGGAATAAAGGG  300

seq1  AGCTCAAGGGGTGTAAAAACTGGGAGAAGGGGACAGAATGGAGACTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAGGGGTGTAAAAACTGGGAGAAGGGGACAGAATGGAGACTATGG  350

seq1  TCTGTATGGATTTAAAGAGAATAAAGTAAAGACAAAGAACAGAGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATGGATTTAAAGAGAATAAAGTAAAGACAAAGAACAGAGAATAAA  400

seq1  AGAAGTTGAAGGTTGTCTACAGTTAGAACCTGGGCTTCATAGGACCCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGAAGGTTGTCTACAGTTAGAACCTGGGCTTCATAGGACCCTAT  450

seq1  CAAAACTGCAAATAATAAAAATAATTTAATCTGGCTGGAGAGATAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGCAAATAATAAAAATAATTTAATCTGGCTGGAGAGATAGCTCA  500

seq1  GTGATGAAAGCCACTGACTGCTTTTCCATAGGTTAAGTTCAAATCCAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAAAGCCACTGACTGCTTTTCCATAGGTTAAGTTCAAATCCAAGC  550

seq1  AACCACATGCTGACTTAGAAACCATCTGTAATGGAATCTGATACCCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACATGCTGACTTAGAAACCATCTGTAATGGAATCTGATACCCTCTT  600

seq1  CTGATGTACTCATATATATGAAATATATAAATTTTAAGATATCATATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTACTCATATATATGAAATATATAAATTTTAAGATATCATATCAG  650

seq1  CACCAAAAAGTTAATCTATGCCATAGCATGATATCAGAAAATGAATAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAAAGTTAATCTATGCCATAGCATGATATCAGAAAATGAATAGCT  700

seq1  GTAGGAAATCCTTCTGGAGAAATGGTCAAGAATTTTTCTCTCTTTAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAATCCTTCTGGAGAAATGGTCAAGAATTTTTCTCTCTTTAGTAG  750

seq1  ATTTATTTCAAGTAAGAGAGAGGCATGAAGAAAGTCATAGTAATTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCAAGTAAGAGAGAGGCATGAAGAAAGTCATAGTAATTAAAAA  800

seq1  GAAGGAATTCAATTATAAGTTTTTCAAATTCACATCAATAGAACTAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATTCAATTATAAGTTTTTCAAATTCACATCAATAGAACTAAGTT  850

seq1  GAAATCAACACATCTATCATTTATGTACGAGTTGCATAATTAAATATTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAACACATCTATCATTTATGTACGAGTTGCATAATTAAATATTGA  900

seq1  CAAGATTTTTAGTAATGTTAAGAAAAGTGGAACAC-TTACTTTAGATCCA  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  CAAGATTTTTAGTAATGTTAAGAAAAGTGGAACACTTTACTTTAGATCC-  949

seq1  AAAAATCGGAACAGGAAATGCAACATGGTACTAGAAAAGTACAAATCTGA  999
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAAATCGGAACAGAAAATGCAACATGGTACTAGAAAAGTACAAATCTGA  999

seq1  CAGATGAACTATGGAATGTTACAGTGTTGAAAACTCAGGTTTTCGACTCC  1049
      |||||| ||||||  ||| |||||||||| ||||||| |||||||||| |
seq2  CAGATG-ACTATG--ATG-TACAGTGTTGGAAACTCA-GTTTTCGACTTC  1044

seq1  ATCAATAAATCCCCCCCCCACACACACA-CAC-ACTTTCCTTTAAACTGG  1097
      |||| |  ||||||||||||   ||||| ||| || || |||||||||||
seq2  ATCATT--ATCCCCCCCCCAACAACACACCACAACCTTTCTTTAAACTGG  1092

seq1  GAAAAAACTCAACAAGAGAGTTGAAAATTATATATTACAATATGAATTTG  1147
      |  ||||||||   |||||| ||||  ||||| |       ||||   | 
seq2  G--AAAACTCA--CAGAGAG-TGAAGTTTATACA-------ATGA--GTA  1128

seq1  AACTAGAGACTCCAGGTAGGATCATCTGGTTA-CAGGGGTAT  1188
       |||  ||||||  | ||| |||||||||||| ||||||| |
seq2  GACT--AGACTCAGGTTAGAATCATCTGGTTACCAGGGGTCT  1168