BAC Information

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BAC

Clone NameB6Ng01-288P22
Chromosome6 (Build37)
Map Location 83,286,396 - 83,411,718
singlet/doubletdoublet
Overlap geneMobk1b, Bola3, D230004J03Rik
Upstream geneTacr1, Pole4, LOC100043412, Hk2, EG622318, Sema4f, D6Mm5e, Dok1, Loxl3, Htra2, Aup1, Dqx1, Tlx2, Pcgf1, Lbx2, A230058J24Rik, Mrpl53, Gcs1, Wbp1, Znhit4, Rtkn, Wdr54, 1700003E16Rik, Dctn1, C330016K18Rik, Mthfd2
Downstream geneDguok, Actg2, Stambp, LOC664956, Clec4f, Cd207, Vax2os2, Vax2os1, Vax2, Atp6v1b1, 1700124L16Rik, Ankrd53, Tex261, LOC665004, Nagk, Paip2b, LOC384450, LOC622683, LOC380687, LOC665098, LOC676366, Zfml, Dysf, LOC665114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288P22.bB6Ng01-288P22.g
ACCGA086514GA086515
length430703
definitionB6Ng01-288P22.b B6Ng01-288P22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,286,396 - 83,286,831)(83,411,016 - 83,411,718)
sequence
cctgtgtaactgagtatgaccaataccccatctttccatctctagctccc
tcttgcagaggttataaaatctcaccaccatgcccagcagaatcctcctt
tctcctcatcctctcatactactgtaatggttctgggttcctttactttc
ctcctcattaggctgtcatcagtgttgtaatgtttgctttttttttgaga
cagggtttctctgtatagccctggctgtcccggaactcactctgtagacc
aggctggcctctgtatagctctggctatcctggaactcactttgtagacc
aggctggcctcgaactcagaaatcctcctgcctctgccttccgagtgctg
ggattaaaggcgtgcgccaccacgcctggcctttaacatatctttttaaa
aaaaatttattctttcatttatatatttat
gaattcacctttcttcaatagccctattgacgtcggagtcagcttataga
gcaggtcctgctactctgtaatcaaatgactttggacccattactcctct
aagccccagaaactttctctctaaaacaataaaaagtaccatgctgtacc
agaaggaaagtaccattttcacaatttctgtgggggaatccatctacaca
caacaatgtgtgtgggagtggtctgtgtagtggggaagctctgtgcaaat
accaaatgctgattagagggttttaacaaatacacgagtaagggctggaa
agatggctcagtagttaagacacttgctgctcttagagaggaccagggtt
tgattctcagcacctacaaggtggctcacaattgtctgtaactccaactc
taaggcatgcacagagtgcacataattacatgcaggcaaaatactcataa
agataaatacatctttaaaaagaaagcaaaaagaaaacaaaaaacacacc
accaaaacctaatacatgactaaacacacccctagaatgaaatacatgac
cagacacacacctaaaaacaaaatacatgaccagtcacatccccaaggcc
aaatacatgaaaagaagtaacatccaagatgaagtaaatttcccaacata
tttaatcttgaaaatggagcaagccaggcctgtgagagggcacagtgggt
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_83286396_83286831
seq2: B6Ng01-288P22.b_47_482

seq1  GAATTCCCTGTGTAACTGAGTATGACCAATACCCCATCTTTCCATCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTGTAACTGAGTATGACCAATACCCCATCTTTCCATCTCTA  50

seq1  GCTCCCTCTTGCAGAGGTTATAAAATCTCACCACCATGCCCAGCAGAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCTTGCAGAGGTTATAAAATCTCACCACCATGCCCAGCAGAATC  100

seq1  CTCCTTTCTCCTCATCCTCTCATACTACTGTAATGGTTCTGGGTTCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTCCTCATCCTCTCATACTACTGTAATGGTTCTGGGTTCCTTT  150

seq1  ACTTTCCTCCTCATTAGGCTGTCATCAGTGTTGTAATGTTTGCTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTCCTCATTAGGCTGTCATCAGTGTTGTAATGTTTGCTTTTTTT  200

seq1  TTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCCGGAACTCACTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCCGGAACTCACTCTG  250

seq1  TAGACCAGGCTGGCCTCTGTATAGCTCTGGCTATCCTGGAACTCACTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGGCTGGCCTCTGTATAGCTCTGGCTATCCTGGAACTCACTTTG  300

seq1  TAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTTCCGA  350
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGCCTTCCGA  350

seq1  GTGCTGGGATTAAAGGCGTGCGCCACCACGCCTGGCCTTTAACATATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGATTAAAGGCGTGCGCCACCACGCCTGGCCTTTAACATATCTT  400

seq1  TTTAAAAAAGATTTATTCATTCATTTATATATTTAT  436
      ||||||||| |||||||| |||||||||||||||||
seq2  TTTAAAAAAAATTTATTCTTTCATTTATATATTTAT  436

seq1: chr6_83411016_83411718
seq2: B6Ng01-288P22.g_71_773 (reverse)

seq1  TTTACCCACTGTGCCCTCTCACAGGCCTGGCTTGCTCCATTTTCAAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCACTGTGCCCTCTCACAGGCCTGGCTTGCTCCATTTTCAAGATT  50

seq1  AAATATGTTGGGAAATTTACTTCATCTTGGATGTTACTTCTTTTCATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTTGGGAAATTTACTTCATCTTGGATGTTACTTCTTTTCATGTA  100

seq1  TTTGGCCTTGGGGATGTGACTGGTCATGTATTTTGTTTTTAGGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTTGGGGATGTGACTGGTCATGTATTTTGTTTTTAGGTGTGTGT  150

seq1  CTGGTCATGTATTTCATTCTAGGGGTGTGTTTAGTCATGTATTAGGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCATGTATTTCATTCTAGGGGTGTGTTTAGTCATGTATTAGGTTTT  200

seq1  GGTGGTGTGTTTTTTGTTTTCTTTTTGCTTTCTTTTTAAAGATGTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTGTTTTTTGTTTTCTTTTTGCTTTCTTTTTAAAGATGTATTTA  250

seq1  TCTTTATGAGTATTTTGCCTGCATGTAATTATGTGCACTCTGTGCATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATGAGTATTTTGCCTGCATGTAATTATGTGCACTCTGTGCATGCC  300

seq1  TTAGAGTTGGAGTTACAGACAATTGTGAGCCACCTTGTAGGTGCTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTTGGAGTTACAGACAATTGTGAGCCACCTTGTAGGTGCTGAGAA  350

seq1  TCAAACCCTGGTCCTCTCTAAGAGCAGCAAGTGTCTTAACTACTGAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCCTGGTCCTCTCTAAGAGCAGCAAGTGTCTTAACTACTGAGCCA  400

seq1  TCTTTCCAGCCCTTACTCGTGTATTTGTTAAAACCCTCTAATCAGCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCCCTTACTCGTGTATTTGTTAAAACCCTCTAATCAGCATTT  450

seq1  GGTATTTGCACAGAGCTTCCCCACTACACAGACCACTCCCACACACATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGCACAGAGCTTCCCCACTACACAGACCACTCCCACACACATTG  500

seq1  TTGTGTGTAGATGGATTCCCCCACAGAAATTGTGAAAATGGTACTTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTAGATGGATTCCCCCACAGAAATTGTGAAAATGGTACTTTCCT  550

seq1  TCTGGTACAGCATGGTACTTTTTATTGTTTTAGAGAGAAAGTTTCTGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACAGCATGGTACTTTTTATTGTTTTAGAGAGAAAGTTTCTGGGG  600

seq1  CTTAGAGGAGTAATGGGTCCAAAGTCATTTGATTACAGAGTAGCAGGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGGAGTAATGGGTCCAAAGTCATTTGATTACAGAGTAGCAGGACC  650

seq1  TGCTCTATAAGCTGACTCCGACGTCAATAGGGCTATTGAAGAAAGGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTATAAGCTGACTCCGACGTCAATAGGGCTATTGAAGAAAGGTGAA  700

seq1  TTC  703
      |||
seq2  TTC  703