BAC Information

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BAC

Clone NameB6Ng01-290N22
Chromosome6 (Build37)
Map Location 141,683,997 - 141,685,162
singlet/doubletsinglet
Overlap geneEG435927
Upstream geneEG664868, LOC664875, Pde3a, Slco1c1, Slco1b2
Downstream geneSlco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290N22.bB6Ng01-290N22.g
ACCGA087903GA087904
length1,1241,140
definitionB6Ng01-290N22.b B6Ng01-290N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagatgatctgatagattttttctttgatgtaaataaagtgtcct
tcttcatgtcttttgattaactttagttggaaatacattttgatagatat
tagaattggtacctatgatggtttgtatattcttggaccagggagtggca
ccatctgaaggtgtggccttgttggaataggtgtgacctggttggaatgg
gtgtgtcactgtgggtttgggtataagatcctcaccctagttgcctggaa
gtcagtcttccactagcagcctttgggtgaagacatagaactctcagctc
cttctgtaccatgcctgcctggatactgccatgctcccaccttgatgata
atgaactgaacctctgaacctgtaagccagccccaattaaatgttgtttt
ttataagacttgccttggtcatggtgtctgttcacagcagtaaaacccta
actaagacagaagttggtactaggagtggggtattgctgtgataggcctg
accatgcttttatctgaaagaatgtggatctttggactttggatttggaa
ctcagtggaatgctttaaatggggcttaatgggtcatcctagtaggaata
tggaagactttgttgttgggagtaatttgaactgtgttgacctggcccaa
gagatttcaaaggagaagaatttcagtatgtggcataaagactgtttttg
tggtattttggtgaagaatgtggctactttttacccttgtctgaaaagtc
tgcctgaggctaaggtgaagagacttggattaattgcattaattgcattg
acaaaggaagtttcaaaaaagcccagcagagactttgttctctggttaag
tctcacaaagagaagtttgaacaagcatagcaagcttagaaaggcaaaat
ataaaatatatgggttcgagtattaaaggagtaccaggaagtgaaatgga
gcaaaatcatgtgttctaggagataacaggtttaaggaagttgggacctt
gggggccagattctacccagcttaattaggatccaaggcatggcggtaca
tacctttaattcccatgagaacatccattgcttgaattctcctgccattc
caaggtgtcaattctctacagaga
gaattcaaacttcatcaaagtaaattcctcaccaattctaagggatagtt
agtgaatctctagagaatacaggaaatagaaataatgaactgaaaaatga
aagagtgtggccacagacctaatacttctacataaaaaatagattttttt
ttgatttgatggaaaattgtggtctggttcttatatatccaatatatatc
actaacttacagaaaatgactagaaacaatatatagaactttagccacta
gggatcatgatttttcaaatgcatgtttgtcacagcatagaatctgtgag
atttttagagatttctagacacaaaatgcacagccaagttgacttggtga
tctctacatgcttttgtttcagatttctttccattaatgaagaacctctc
ctgcaatccaatttatatgctttatctccttataagtgtgctccagttca
atacatttgtcagtatggtatcttatgttcctaagtacctggaacagcaa
tatggaaaatcgtctgcagatgtacttttcatcatgggtatgtagtttca
ttattccgttagtagcactcttgctgcaaggatattggcttagttagggt
tttaaagctgtaaagagacaggtaccacgacccaagcaactcatataaag
gcaaatatttaatgaacaggcttacagttttagacgcacagtctatcatc
atcatgtcaggaaatatggaagcatacaaggtaatatggtactaaagaaa
gagctgagagttcttcatcttgatatggctgcaaacaagagaaactgact
attgtccactaggcagtacttcaaagcccacctccttcaggaatacactc
tactagcaaatccactccctctccaacagggccatacctcctaataatgc
ccttcatatggtcaagcatattctaaccaccacaatcataataggtgaat
ccctcagagcaagataagagtagatcagaagataaactcactgagatact
atatctactcctagaattttatattttgggctcattttgttgttgttctt
ttttttcttttcataattttatagtatttctcatacattcaatgcctatc
tgaaggttccgccctcccataccaacccactcccaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141683997_141685162
seq2: B6Ng01-290N22.g_67_1206 (reverse)

seq1  AGAAATGGGAGTGGGTTGGTATGGGAGGGGGGGAACTTTCAGGATAGCAT  50
      |||| ||||||||||||||||||||| ||| ||||| |||| |||||   
seq2  AGAATTGGGAGTGGGTTGGTATGGGA-GGGCGGAACCTTCA-GATAGGCA  48

seq1  TTGAAATGTAAATGAAGAAAATACCTAATAAAATATTGGAAAAAGGAAAA  100
      ||| |||||  ||||   ||||||   |||||||  ||  |||||  |||
seq2  TTG-AATGT--ATGA--GAAATAC--TATAAAATTATG--AAAAG--AAA  87

seq1  AAAAAGAAAACAAAACAAAACAAAAATTGAAGCCAAAATATAAAATTCTA  150
      |||||||| |      | |||||||  |||  ||||||||||||||||||
seq2  AAAAAGAACA------ACAACAAAA--TGAGCCCAAAATATAAAATTCTA  129

seq1  GGAGTAAGATATAGTATCTCAGTGAGTTTATTCTTCTTGATCTTACTCTT  200
      ||||| |||||||||||||||||||||||| ||||| ||||| ||||| |
seq2  GGAGT-AGATATAGTATCTCAGTGAGTTTA-TCTTC-TGATC-TACTC-T  174

seq1  TATCTTGCTCTTGAGGATTCACCTATTATGATTGTGGTGGTTAGAATATG  250
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TATCTTGCTCTGAGGGATTCACCTATTATGATTGTGGTGGTTAGAATATG  224

seq1  CTTGACCATATGAAGGGCATTATTAGGAGGTATGGCCCTGTTGGAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCATATGAAGGGCATTATTAGGAGGTATGGCCCTGTTGGAGAGGG  274

seq1  AGTGGATTTGCTAGTAGAGTGTATTCCTGAAGGAGGTGGGCTTTGAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATTTGCTAGTAGAGTGTATTCCTGAAGGAGGTGGGCTTTGAAGTA  324

seq1  CTGCCTAGTGGACAATAGTCAGTTTCTCTTGTTTGCAGCCATATCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTAGTGGACAATAGTCAGTTTCTCTTGTTTGCAGCCATATCAAGAT  374

seq1  GAAGAACTCTCAGCTCTTTCTTTAGTACCATATTACCTTGTATGCTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACTCTCAGCTCTTTCTTTAGTACCATATTACCTTGTATGCTTCCA  424

seq1  TATTTCCTGACATGATGATGATAGACTGTGCGTCTAAAACTGTAAGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTGACATGATGATGATAGACTGTGCGTCTAAAACTGTAAGCCTG  474

seq1  TTCATTAAATATTTGCCTTTATATGAGTTGCTTGGGTCGTGGTACCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAATATTTGCCTTTATATGAGTTGCTTGGGTCGTGGTACCTGTC  524

seq1  TCTTTACAGCTTTAAAACCCTAACTAAGCCAATATCCTTGCAGCAAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACAGCTTTAAAACCCTAACTAAGCCAATATCCTTGCAGCAAGAGT  574

seq1  GCTACTAACGGAATAATGAAACTACATACCCATGATGAAAAGTACATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTAACGGAATAATGAAACTACATACCCATGATGAAAAGTACATCTG  624

seq1  CAGACGATTTTCCATATTGCTGTTCCAGGTACTTAGGAACATAAGATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGATTTTCCATATTGCTGTTCCAGGTACTTAGGAACATAAGATACC  674

seq1  ATACTGACAAATGTATTGAACTGGAGCACACTTATAAGGAGATAAAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGACAAATGTATTGAACTGGAGCACACTTATAAGGAGATAAAGCAT  724

seq1  ATAAATTGGATTGCAGGAGAGGTTCTTCATTAATGGAAAGAAATCTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGGATTGCAGGAGAGGTTCTTCATTAATGGAAAGAAATCTGAAA  774

seq1  CAAAAGCATGTAGAGATCACCAAGTCAACTTGGCTGTGCATTTTGTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCATGTAGAGATCACCAAGTCAACTTGGCTGTGCATTTTGTGTCT  824

seq1  AGAAATCTCTAAAAATCTCACAGATTCTATGCTGTGACAAACATGCATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTCTAAAAATCTCACAGATTCTATGCTGTGACAAACATGCATTT  874

seq1  GAAAAATCATGATCCCTAGTGGCTAAAGTTCTATATATTGTTTCTAGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCATGATCCCTAGTGGCTAAAGTTCTATATATTGTTTCTAGTCA  924

seq1  TTTTCTGTAAGTTAGTGATATATATTGGATATATAAGAACCAGACCACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTAAGTTAGTGATATATATTGGATATATAAGAACCAGACCACAA  974

seq1  TTTTCCATCAAATCAAAAAAAAATCTATTTTTTATGTAGAAGTATTAGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATCAAATCAAAAAAAAATCTATTTTTTATGTAGAAGTATTAGGT  1024

seq1  CTGTGGCCACACTCTTTCATTTTTCAGTTCATTATTTCTATTTCCTGTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCCACACTCTTTCATTTTTCAGTTCATTATTTCTATTTCCTGTAT  1074

seq1  TCTCTAGAGATTCACTAACTATCCCTTAGAATTGGTGAGGAATTTACTTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAGATTCACTAACTATCCCTTAGAATTGGTGAGGAATTTACTTT  1124

seq1  GATGAAGTTTGAATTC  1166
      ||||||||||||||||
seq2  GATGAAGTTTGAATTC  1140