BAC Information

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BAC

Clone NameB6Ng01-292G16
Chromosome6 (Build37)
Map Location 128,427,019 - 128,600,140
singlet/doubletdoublet
Overlap genePzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878
Upstream geneParp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598
Downstream geneLOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292G16.bB6Ng01-292G16.g
ACCGA089065GA089066
length1,1381,118
definitionB6Ng01-292G16.b B6Ng01-292G16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,599,007 - 128,600,140)(128,427,019 - 128,428,123)
sequence
gaattccaaagagagcccaataaagttatttccttaaaaggagaagagac
agtaacctaggactttcctcaaaagagtcagacataattttctcaggaaa
gacataaaatgaaccataatgcaggaagtccccatgaatgaaatatgaag
ggactaaaaccaaagcgtgaagacagaaggacagcgattgcagcagcccg
ctcagctccactggaactgtgtcaaaaagctgtgctggtttcataccttt
catcctttctggttcatggctgtgccagtcactgttttaccagagttaaa
ttactagatcaccagagttccattgattgattgttaaaacttggaccttt
agaagtcttaatagcatatttatcttttaagacacttatgacttgtataa
acttcaaacttttttcttaatcattgcaaagcaagtttttttttattatt
aaaacaatggaacagtaaagttatactgaaatctgtttgtgttttaatat
gaggcctgtcagcaaagcaaacttgtctatgagtttccctttctcactgg
gagatagaggaggtctaacaaagcatggcctgattttcctatttcaaatg
cattaaaccgagaaagctacagttaaccatcaataccaccagaaatctga
gaaggataaatttgaacagaatgtataaaccaaaatagcctctgtatcaa
tacaatgacaaagacttgccctagtagaaggagtggcttctgtcttcagt
gatcacacaagacagcattaactctttcactgccacacagcgtagcatgg
acattcagctgccatgccctgaagattcctgtgggtgaggaacatgaaag
cctgacccacattgcaagggaaagactggcagtcaattcttcagtaccct
tctttgcccacagtctcagtgggttcctccagtgggtgaggcatgaggca
gtctacttcagtggctagcattatcagtaatccaggttggattcatgttc
tttgaatgagactaaagctgcttgttagtgttatgccaagtctcgggtgc
cccagaactcttaagagtgccagcccgagtactattaaacaggagagaca
tttttttttcatgagccagacctgaatcttcaagcctt
gaattcctagaggcagctgtgtcgctgggaccacgaaacaggcagagatg
agtgagcttgtgttcaactggcctttacattttttttaaaaaaagaggcc
caacatgtccagattttatttataaagcttttttttttttcctggctgtt
atacagagaataaaaatgttgctacagccacagtgtaactggtaggcaca
gatggccgattcacccatcacagctgtccacactacagcaagtctcacat
gaaaatatttacagcccccctctctctgttgagaatagtcttctcttata
cagtacatcctgaacacccccccccccaccccactcctcccagctccctt
tgcccagatccctcccggcctctttccctaagtcagagcttgttttcttt
tcactggatacagatttaaagatgtatctatttcatttataatgagtaca
ctgtaactgtcctcacacaccagaagagtgcacgggatcccactacagat
gggtgtgagccaccatgtggttgctgggaattgaactcaggacctctgga
agagcagtgctcttaacctgctgagccacctcaccatcgttaagagcttg
ttttcagtaacttctggggaataacaatgacgttgagctttggcaaactc
cttacagaggactgcaggaaactagtttttctggtcctctgcctgttggt
gtaggtcactcaagactccaactgctaatcccgactaatctgattttcct
ggtgtgaactcaaaagcttctttgttttctgatagagattaactttacag
acaatgttggaaaacccctactaaaaaaacggaccttttactcttttttt
tgcctttcccatgaaactccctctaacccattctcagaagcagcctgcct
ccttgtttttgaacaaattcagaaaaagtccaacagagtaacaaatgtat
cttttttggaagctgaagtaaagtcttgggtgttgccttcctgctgcttc
cgttgatgtgcccgtttagtgtaactccttgtaattatctgtcatttatt
cagaattcaacaaatcactcaatgatttcacaagtgaacaatgttcccca
tggtgatcctctcctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128599007_128600140
seq2: B6Ng01-292G16.b_42_1179 (reverse)

seq1  AAGGCTTG-AGA-TCAGGTCTGGCTCATGAAAAAAAAATGTCTCTCCT-T  47
      |||||||| ||| ||||||||||||||||||||||||||||||||||| |
seq2  AAGGCTTGAAGATTCAGGTCTGGCTCATGAAAAAAAAATGTCTCTCCTGT  50

seq1  GTTATAGTACTTCGGGCTGGCAACTCTTAAGAGTTCTGGGGCACCCGAGA  97
       | ||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  TTAATAGTAC-TCGGGCTGGC-ACTCTTAAGAGTTCTGGGGCACCCGAGA  98

seq1  CCTGGGCATAACACTAAC-AGCAGCCTTAGTCTCATTCAAAG-ACATGAA  145
       || |||||||||||||| |||||| |||||||||||||||| |||||||
seq2  -CTTGGCATAACACTAACAAGCAGCTTTAGTCTCATTCAAAGAACATGAA  147

seq1  TCC-ACCTGGATTACTGATAATGCTAGCCACTGAAGTAGACTGCCTCATG  194
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTGGATTACTGATAATGCTAGCCACTGAAGTAGACTGCCTCATG  197

seq1  CCTCACCCACTGGAGGAACCCACTGAGACTGTGGGC-AAGGAGGGTACTG  243
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  CCTCACCCACTGGAGGAACCCACTGAGACTGTGGGCAAAGAAGGGTACTG  247

seq1  AAGAATTGACTGCCAGTCTTTCCCTTGCAATGTGGGTCAGGCTTTCATGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGACTGCCAGTCTTTCCCTTGCAATGTGGGTCAGGCTTTCATGT  297

seq1  TCCTCACCCACAGGAATCTTCAGGGCATGGCAGCTGAATGTCCATGCTAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCCACAGGAATCTTCAGGGCATGGCAGCTGAATGTCCATGCTAC  347

seq1  GCTGTGTGGCAGTGAAAGAGTTAATGCTGTCTTGTGTGATCACTGAAGAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGGCAGTGAAAGAGTTAATGCTGTCTTGTGTGATCACTGAAGAC  397

seq1  AGAAGCCACTCCTTCTACTAGGGCAAGTCTTTGTCATTGTATTGATACAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCACTCCTTCTACTAGGGCAAGTCTTTGTCATTGTATTGATACAG  447

seq1  AGGCTATTTTGGTTTATACATTCTGTTCAAATTTATCCTTCTCAGATTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATTTTGGTTTATACATTCTGTTCAAATTTATCCTTCTCAGATTTC  497

seq1  TGGTGGTATTGATGGTTAACTGTAGCTTTCTCGGTTTAATGCATTTGAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTATTGATGGTTAACTGTAGCTTTCTCGGTTTAATGCATTTGAAA  547

seq1  TAGGAAAATCAGGCCATGCTTTGTTAGACCTCCTCTATCTCCCAGTGAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAATCAGGCCATGCTTTGTTAGACCTCCTCTATCTCCCAGTGAGA  597

seq1  AAGGGAAACTCATAGACAAGTTTGCTTTGCTGACAGGCCTCATATTAAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAACTCATAGACAAGTTTGCTTTGCTGACAGGCCTCATATTAAAA  647

seq1  CACAAACAGATTTCAGTATAACTTTACTGTTCCATTGTTTTAATAATAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAGATTTCAGTATAACTTTACTGTTCCATTGTTTTAATAATAAA  697

seq1  AAAAAACTTGCTTTGCAATGATTAAGAAAAAAGTTTGAAGTTTATACAAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTTGCTTTGCAATGATTAAGAAAAAAGTTTGAAGTTTATACAAG  747

seq1  TCATAAGTGTCTTAAAAGATAAATATGCTATTAAGACTTCTAAAGGTCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTGTCTTAAAAGATAAATATGCTATTAAGACTTCTAAAGGTCCA  797

seq1  AGTTTTAACAATCAATCAATGGAACTCTGGTGATCTAGTAATTTAACTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAACAATCAATCAATGGAACTCTGGTGATCTAGTAATTTAACTCT  847

seq1  GGTAAAACAGTGACTGGCACAGCCATGAACCAGAAAGGATGAAAGGTATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAACAGTGACTGGCACAGCCATGAACCAGAAAGGATGAAAGGTATG  897

seq1  AAACCAGCACAGCTTTTTGACACAGTTCCAGTGGAGCTGAGCGGGCTGCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGCACAGCTTTTTGACACAGTTCCAGTGGAGCTGAGCGGGCTGCT  947

seq1  GCAATCGCTGTCCTTCTGTCTTCACGCTTTGGTTTTAGTCCCTTCATATT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCGCTGTCCTTCTGTCTTCACGCTTTGGTTTTAGTCCCTTCATATT  997

seq1  TCATTCATGGGGACTTCCTGCATTATGGTTCATTTTATGTCTTTCCTGAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATGGGGACTTCCTGCATTATGGTTCATTTTATGTCTTTCCTGAG  1047

seq1  AAAATTATGTCTGACTCTTTTGAGGAAAGTCCTAGGTTACTGTCTCTTCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGTCTGACTCTTTTGAGGAAAGTCCTAGGTTACTGTCTCTTCT  1097

seq1  CCTTTTAAGGAAATAACTTTATTGGGCTCTCTTTGGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGGAAATAACTTTATTGGGCTCTCTTTGGAATTC  1138

seq1: chr6_128427019_128428123
seq2: B6Ng01-292G16.g_64_1181

seq1  GAATTCCTAGAGGCAGCTGTGTCGCTGGGACCACGAAACAGGCAGAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGAGGCAGCTGTGTCGCTGGGACCACGAAACAGGCAGAGATG  50

seq1  AGTGAGCTTGTGTTCAACTGGCCTTTACATTTTTTTTAAAAAAAGAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTTGTGTTCAACTGGCCTTTACATTTTTTTTAAAAAAAGAGGCC  100

seq1  CAACATGTCCAGATTTTATTTATAAAGCTTTTTTTTTTTTCCTGGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGTCCAGATTTTATTTATAAAGCTTTTTTTTTTTTCCTGGCTGTT  150

seq1  ATACAGAGAATAAAAATGTTGCTACAGCCACAGTGTAACTGGTAGGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAATAAAAATGTTGCTACAGCCACAGTGTAACTGGTAGGCACA  200

seq1  GATGGCCGATTCACCCATCACAGCTGTCCACACTACAGCAAGTCTCACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCGATTCACCCATCACAGCTGTCCACACTACAGCAAGTCTCACAT  250

seq1  GAAAATATTTACAGCCCCCCTCTCTCTGTTGAGAATAGTCTTCTCTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTTACAGCCCCCCTCTCTCTGTTGAGAATAGTCTTCTCTTATA  300

seq1  CAGTACATCCTGAACACCCCCCCCCCCACCCCACTCCTCCCAGCTCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATCCTGAACACCCCCCCCCCCACCCCACTCCTCCCAGCTCCCTT  350

seq1  TGCCCAGATCCCTCCCGGCCTCTTTCCCTAAGTCAGAGCTTGTTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGATCCCTCCCGGCCTCTTTCCCTAAGTCAGAGCTTGTTTTCTTT  400

seq1  TCACTGGATACAGATTTAAAGATGTATCTATTTCATTTATAATGAGTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGATACAGATTTAAAGATGTATCTATTTCATTTATAATGAGTACA  450

seq1  CTGTAACTGTCCTCACACACCAGAAGAGTGCACGGGATCCCACTACAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTGTCCTCACACACCAGAAGAGTGCACGGGATCCCACTACAGAT  500

seq1  GGGTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA  550

seq1  AGAGCAGTGCTCTTAACCTGCTGAGCCACCTCACCATCGTTAAGAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTGCTCTTAACCTGCTGAGCCACCTCACCATCGTTAAGAGCTTG  600

seq1  TTTTCAGTAACTTCTGGGGAATAACAATGACGTTGAGCTTTGGCAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGTAACTTCTGGGGAATAACAATGACGTTGAGCTTTGGCAAACTC  650

seq1  CTTACAGAGGACTGCAGGAAACTAGTTTTTCTGGTCCTCTGCCTGTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGAGGACTGCAGGAAACTAGTTTTTCTGGTCCTCTGCCTGTTGGT  700

seq1  GTAGGTCACTCAAGACTCCAACTGCTAATCCCGACTAATCTGA-TTTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTAGGTCACTCAAGACTCCAACTGCTAATCCCGACTAATCTGATTTTCCT  750

seq1  GGTGTGAACTCAAAAGCTTCTTTG-TTTCTGATAGAGATTAACTTTACAG  798
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGTGTGAACTCAAAAGCTTCTTTGTTTTCTGATAGAGATTAACTTTACAG  800

seq1  ACAATGTTG--AAAACCCTACTAAAAAA--CGACC-TTTACTC-TTTTTT  842
      |||||||||  ||| |||||||||||||   |||| ||||||| ||||||
seq2  ACAATGTTGGAAAACCCCTACTAAAAAAACGGACCTTTTACTCTTTTTTT  850

seq1  TGCC-TTCCCATG-AACT-CCTCTAACCCA-TCTCAGAAGCAGCCTGCCT  888
      |||| |||||||| |||| ||||||||||| |||||||||||||||||||
seq2  TGCCTTTCCCATGAAACTCCCTCTAACCCATTCTCAGAAGCAGCCTGCCT  900

seq1  CCTTG-TTTTGAACAAA-TCAGAAAAAGTCCAACAGAGTAACAAATGTAT  936
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTTGTTTTTGAACAAATTCAGAAAAAGTCCAACAGAGTAACAAATGTAT  950

seq1  C-TTTTTGGAAGCTG-AGTAAAGTCTTGGGTGTTG-CTTCCTGCTGCTTC  983
      | ||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  CTTTTTTGGAAGCTGAAGTAAAGTCTTGGGTGTTGCCTTCCTGCTGCTTC  1000

seq1  CGTTGATGTGCCGGTTTAGTTGGTAACTCC-TGTAATTATCCTTGTTCAT  1032
      |||||||||||| |||||||  |||||||| ||||||||||  || ||||
seq2  CGTTGATGTGCCCGTTTAGT--GTAACTCCTTGTAATTATC--TG-TCAT  1045

seq1  TTATTCCAGAATTCAACAAATCCAACTCCAAATGGTTTCACAAGTTGACA  1082
      ||||| ||||||||||||||||  ||||  |||| ||||||||||  |||
seq2  TTATT-CAGAATTCAACAAATC--ACTC--AATGATTTCACAAGTGAACA  1090

seq1  ATGTCCCCC--TGTG-TC--CTCCTGGT  1105
      |||| ||||   ||| ||  ||||||||
seq2  ATGTTCCCCATGGTGATCCTCTCCTGGT  1118