MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-292L20
Chromosome	6 (Build37)
Map Location	35,775,993 - 35,883,319
singlet/doublet	doublet
Overlap gene	LOC100039327
Upstream gene	Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312
Downstream gene	9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki
Link	Open Mouse BAC browser

Click to get alignment info.

name	Agbl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76223 MGI:1923473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem140 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68487 MGI:1915737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110062M04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78412 MGI:1925662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9530020G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101240 MGI:2141558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stra8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20899 MGI:107917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010107G12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243753 MGI:1917272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnot4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53621 MGI:1859026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup205 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70699 MGI:2141625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 228 ESTs, 7 Proteins

name	1810058I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67705 MGI:1914955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs

name	Slc13a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243755 MGI:2442367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC064033 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208164 MGI:3039626
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700065J11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73409 MGI:1920659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Mtpn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14489 MGI:99445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039312 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039327 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039327
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	9330158H04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319472 MGI:2442094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Chrm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243764 MGI:88397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620863 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620863 MGI:3645909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	LOC100039370 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039370
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ptn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19242 MGI:97804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039514 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Dgki (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320127 MGI:2443430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agbl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300908 GeneID:76223 MGI:1923473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP/GTP binding protein-like 3 transcript_id : NM_178630.3

name	Tmem140 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802935 GeneID:68487 MGI:1915737
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 140 transcript_id : NM_197986.2

name	3110062M04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559435 GeneID:78412 MGI:1925662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110062M04 gene transcript_id : NM_199145.1

name	9530020G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61656181 GeneID:101240 MGI:2141558
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530020G05 gene transcript_id : NM_001013366.1

name	Stra8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678172 GeneID:20899 MGI:107917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stimulated by retinoic acid gene 8 transcript_id : NM_009292.1

name	2010107G12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701583 GeneID:243753 MGI:1917272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010107G12 gene transcript_id : NM_001025573.1

name	Cnot4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381083 GeneID:53621 MGI:1859026
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCR4-NOT transcription complex, subunit 4 transcript_id : NM_016877.3

name	Nup205 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377254 GeneID:70699 MGI:2141625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 209 ESTs, 4 Proteins product : nucleoporin 205, transcript variant 1 transcript_id : XM_133073.7

name	Slc13a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354060 GeneID:243755 MGI:2442367
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 13 (sodium/sulfate symporters), member 4 transcript_id : NM_172892.2

name	BC064033 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734065 GeneID:208164 MGI:3039626
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC064033 transcript_id : NM_173375.1

name	1700065J11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255040 GeneID:73409 MGI:1920659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700065J11 gene transcript_id : XM_001472628.1

name	Mtpn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347788 GeneID:14489 MGI:99445
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotrophin transcript_id : NM_008098.3

name	LOC100039312 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255042 GeneID:100039312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039312 transcript_id : XM_001472648.1

name	LOC100039327 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255044 GeneID:100039327
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to SPPL3 protein transcript_id : XM_001472689.1

name	Chrm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45237188 GeneID:243764 MGI:88397
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, muscarinic 2, cardiac transcript_id : NM_203491.1

name	EG620863 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255046 GeneID:620863 MGI:3645909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : predicted gene, EG620863 transcript_id : XM_885246.3

name	Ptn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130571 GeneID:19242 MGI:97804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleiotrophin transcript_id : NM_008973.2

name	LOC100039514 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255051 GeneID:100039514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to gag protein transcript_id : XM_001473142.1

name	Dgki (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487070 GeneID:320127 MGI:2443430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, iota transcript_id : NM_001081206.1

name	Agbl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120300909 CCDS:CCDS19995.1 GeneID:76223 MGI:1923473
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : carboxypeptidase 3, cytosolic product : ATP/GTP binding protein-like 3 protein_id : NP_848745.2

name	Tmem140 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574062 CCDS:CCDS19996.1 GeneID:68487 MGI:1915737
definition	codon_start : 1 product : hypothetical protein LOC68487 protein_id : NP_932103.1

name	3110062M04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559436 CCDS:CCDS19997.1 GeneID:78412 MGI:1925662
definition	codon_start : 1 product : hypothetical protein LOC78412 protein_id : NP_954596.1

name	9530020G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61656182 GeneID:101240 MGI:2141558
definition	codon_start : 1 product : hypothetical protein LOC101240 protein_id : NP_001013384.1

name	Stra8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678173 GeneID:20899 MGI:107917
definition	codon_start : 1 product : stimulated by retinoic acid gene 8 protein_id : NP_033318.1

name	2010107G12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701584 CCDS:CCDS19998.1 GeneID:243753 MGI:1917272
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC243753 protein_id : NP_001020744.1

name	Cnot4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560446 CCDS:CCDS19999.1 GeneID:53621 MGI:1859026
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : negative regulator of transcription 4 homolog product : CCR4-NOT transcription complex, subunit 4 protein_id : NP_058573.2

name	Nup205 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51711896 GeneID:70699 MGI:2141625
definition	codon_start : 1 product : nucleoporin 205 isoform 1 protein_id : XP_133073.3

name	Slc13a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370364 CCDS:CCDS20000.1 GeneID:243755 MGI:2442367
definition	codon_start : 1 product : solute carrier family 13 (sodium/sulfate symporters), member 4 protein_id : NP_766480.1

name	BC064033 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734066 CCDS:CCDS20001.1 GeneID:208164 MGI:3039626
definition	codon_start : 1 product : hypothetical protein LOC208164 protein_id : NP_775551.1

name	1700065J11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255041 GeneID:73409 MGI:1920659
definition	codon_start : 1 product : hypothetical protein LOC73409 protein_id : XP_001472678.1

name	Mtpn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679961 CCDS:CCDS20002.1 GeneID:14489 MGI:99445
definition	GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0030182 - neuron differentiation [Evidence ISS] codon_start : 1 note : granule cell differentiation protein product : myotrophin protein_id : NP_032124.1

name	LOC100039312 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255043 GeneID:100039312
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472698.1

name	LOC100039327 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255045 GeneID:100039327
definition	codon_start : 1 product : similar to SPPL3 protein protein_id : XP_001472739.1

name	Chrm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45237189 CCDS:CCDS20004.1 GeneID:243764 MGI:88397
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004981 - muscarinic acetylcholine receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007213 - acetylcholine receptor signaling, muscarinic pathway [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : AChR M2; muscarinic acetylcholine receptor 2 product : cholinergic receptor, muscarinic 2, cardiac protein_id : NP_987076.1

name	EG620863 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900823 GeneID:620863 MGI:3645909
definition	codon_start : 1 product : hypothetical protein protein_id : XP_890339.1

name	Ptn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679543 CCDS:CCDS20005.1 GeneID:19242 MGI:97804
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence TAS] GO_process : GO:0030282 - bone mineralization [Evidence IDA]; GO:0007612 - learning [Evidence IMP]; GO:0001503 - ossification [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : osteoblastic cell factor; heparin-binding brain mitogen; heparin-binding growth factor 8; heparin affin regulatory peptide; heparin-binding neurotorphic factor; heparin-binding neurite promoting factor; heparin-binding growth-associated molecule product : pleiotrophin protein_id : NP_032999.1

name	LOC100039514 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255052 GeneID:100039514
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001473192.1

name	Dgki (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487071 GeneID:320127 MGI:2443430
definition	GO_function : GO:0004143 - diacylglycerol kinase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : diacylglycerol kinase, iota protein_id : NP_001074675.1

name	LOC100039370 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039370
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:162229
definition	standard_name : RH125407

name	(CDS detail)
type	STS
link
xref	UniSTS:210237
definition	standard_name : RH136243

name	(CDS detail)
type	STS
link
xref	UniSTS:165459
definition	standard_name : AI987683

name	(CDS detail)
type	STS
link
xref	UniSTS:270869
definition	standard_name : PMC138456P1

name	(CDS detail)
type	STS
link
xref	UniSTS:225877
definition	standard_name : G65199

name	(CDS detail)
type	STS
link
xref	UniSTS:267560
definition	standard_name : MARC_13799-13800:1028296759:1

name	(CDS detail)
type	STS
link
xref	UniSTS:235409
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235408
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235410
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128563
definition	standard_name : D1Mit222

name	(CDS detail)
type	STS
link
xref	UniSTS:164321
definition	standard_name : AV248391

name	(CDS detail)
type	STS
link
xref	UniSTS:159492
definition	standard_name : AI414869

name	(CDS detail)
type	STS
link
xref	UniSTS:165458
definition	standard_name : AI848234

name	(CDS detail)
type	STS
link
xref	UniSTS:130979
definition	standard_name : D6Mit77

name	(CDS detail)
type	STS
link
xref	UniSTS:13149
definition	standard_name : WI-21170

name	(CDS detail)
type	STS
link
xref	UniSTS:211522
definition	standard_name : RH128214

name	(CDS detail)
type	STS
link
xref	UniSTS:231492
definition	standard_name : RH142244

name	(CDS detail)
type	STS
link
xref	UniSTS:218519
definition	standard_name : RH135242

name	(CDS detail)
type	STS
link
xref	UniSTS:217668
definition	standard_name : RH134386

name	(CDS detail)
type	STS
link
xref	UniSTS:130981
definition	standard_name : D6Mit79

name	(CDS detail)
type	STS
link
xref	UniSTS:123968
definition	standard_name : 32.MHAa55g8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:492976
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:265990
definition	standard_name : CHRM2

name	(CDS detail)
type	STS
link
xref	UniSTS:256465
definition	standard_name : Chrm2

name	(CDS detail)
type	STS
link
xref	UniSTS:225111
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:144299
definition	standard_name : Ptn

name	(CDS detail)
type	STS
link
xref	UniSTS:144298
definition	standard_name : Ptn

name	(CDS detail)
type	STS
link
xref	UniSTS:162976
definition	standard_name : RH126268

name	1810058I24Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94377264 GeneID:67705 MGI:1914955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs product : RIKEN cDNA 1810058I24 gene transcript_id : XR_002347.1

name	9330158H04Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255048 GeneID:319472 MGI:2442094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 9330158H04 gene transcript_id : XR_035201.1

clone name	MSMg01-327H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115H22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-321L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-292L20.b	B6Ng01-292L20.g
ACC	GA089300	GA089301
length	1,190	593
definition	B6Ng01-292L20.b	B6Ng01-292L20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(35,775,993 - 35,777,186)	(35,882,727 - 35,883,319)
sequence	gaattcatagcagctggaactttatagtatataaagacattttgagtctt tgctgggaatatcctatgctttttagaggttatgtgtgcccacagaatgg catcatagcagcaccatctgctatctgtttatgctattgcatttgccagg ttactttttaccaccatatatactacgttatgacagtgaacagatctact aaaaatagaaatacagcattattttaattacagccgtttcaattgctcat caattcaacaatgaaaaatggaaggagtaccacaaagttgctgagctgtc atttcttttaatagctctttacgagtgtggcttgtaccgctggatagtga ttatgatcacttttgcaggtgggatgcacatccttctttctaacagctat aagtactgaaggagggtggcaggtcataaacatagggacccttaatctta atctaagagtttcacccccatctattctcttttcaaccctgagttgtttt aggattttcccccctgccattactttgtttcttcttatggtggagaagag accagatataacaaaggaagtatgcaagttgtttttacctaagagtcata gtcaagttaagagttcttaggtatgacttcccatgtcttcaaatgctgca cagaaagtggactgtggttgccagtgtgaagtgtagtatattattagaac ctctctcagttggcagggttataccaagcatagaaggcttgtgataagta gaaagatcttcagatccttctattaactcattgactgtatcagggtcgtg gactacaagcaaagatttagatcatatcatcttggttatgaacataacat gaatgtgttctagaagttttccattgtgaaactggcttttgtatttattg agtaatttttagatctaattaactttataaattaactttaaaaattggcc acataatacaataatgttatggtacctttcacaatataataacacttgat aattccaaaatagaggacaatatttatcatatagctttcttcaagctaag aagtgtttaaaatatcttgatattgttggacatgaaaatatcaattttgg ctgaatcactcacccatacctgatcaattgtaaatgttctgaatatcaac tgggtcactgtttggatcaacagtctcctaaggttctcta	gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggatagaaaccaatattata tagcttctaaaaataactgcctgtataacagcattcttgagtggcagcca tggagagtacttgcagcgccctcagtggcctggtgacaggcgatctgaag ccctgtcatgcttcagccagatgactgcttgctctgtctcctggttcttt ggccaagcacatcccatgactctttacagaaaatgaggttatgccagaac agctgggaaacgaggtgaatactcctctgatttgtccaaaaccagcagaa atgtctcagaggaactggtcacataaaaattgtctgctttaccggttaga gcggtgcttttatgttgggtaattcctggatactggaaattggcctaaca gtttaaactagtgaaggtgaagagaataatcaaaaaggggaagctaagta aaatagccaagagcatggagcagggggagagggggtgaggggg
quality values	Open. Hide. 58 31 29 28 62 38 27 62 54 62 47 47 62 62 62 62 62 38 62 56 62 62 54 62 62 49 62 62 62 62 59 59 51 38 33 43 56 49 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 42 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 49 52 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 42 41 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 49 58 58 58 58 54 58 45 54 58 54 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 54 58 58 58 58 49 58 58 58 58 51 51 58 48 53 58 50 58 49 51 51 51 58 58 37 58 58 50 58 58 58 51 54 58 52 58 52 51 51 53 58 54 58 49 58 52 50 41 51 58 46 58 58 48 58 44 40 51 58 51 54 58 53 53 27 58 58 51 58 50 58 54 49 52 53 53 53 58 58 58 51 49 58 50 46 33 58 58 53 46 39 51 54 51 49 46 33 53 53 58 54 58 58 49 34 52 58 50 58 52 52 53 50 53 35 28 52 49 41 41 45 54 49 40 49 51 50 51 53 53 45 49 32 51 41 49 49 31 35 22 49 35 32 53 49 39 37 44 50 32 52 39 39 32 53 40 40 46 39 19 33 17 44 40 51 42 52 33 32 32 52 32 38 42 37 42 54 53 37 33 26 52 45 54 42 35 24 47 32 32 52 45 52 52 31 45 40 52 39 53 42 53 39 26 46 36 42 45 31 31 53 31 35 32 31 16 13 49 18 32 42 40 21 40 33 30 26 31 33 32 30 33 31 35 30 47 31 31 31 21 51 45 31 35 34 35 33 29 31 30 42 39 35 35 45 31 18 13 19 31 31 31 30 31 30 27 31 29 31 24 27 31 21 30 43 31 32 31 42 31 42 23 30 31 26 31 28 33 33 29 42 48 48 32 30 22 20 16 26 18 16 31 41 46 26 29 31 34 31 17 31 46 46 46 31 26 31 31 46 36 31 29 33 30 46 36 31 29 21 28 48 46 41 30 32 14 32 31 29 31 19 21 26 29 19 20 25 29 47 26 11 13 14 44 23 11 27 16 25 29 21 43 31 27 44 44 48 28 22 15 31 31 32 31 25 22 18 19 28 26 26 21 11 30 12 19 18 24 18 33 29 21 21 21 29 31 21 31 30 25 28 48 33 27 18 23 18 12 14 26 12 6 6 10 24 8 23 15 15 16 17 30 22 17 13 33 14 17 9 16 28 38 40 12 12 16 5 4 6 9 18 6 15 10 9 11 21 34 18 10 7 7 6 11 27 7 24 24 28 26 38 27 28 11 27 26 14 15 27 27 28 21 27 10 27 28 7 4 5 5 47 18 15 34 14 7 8 15 26 19 8 23 23 11 13 7 9 13 2 5 2 7 8 9 20 8 16 13 25 29 24 14 3 3 5 18 4 5 21 28 28 18 8 10 15 15 11 23 13 11 4 8 10 16 7 14 4 28 17 4 8 9 5 6 23 7 9 5 15 4 4 23 4 12 5 15 26 17 4 6 12 4 6 13 8 12 9 9 9 3 5 7 8 16 6 15 12 15 5 10 5 2 2 8 5 17 11 13 11 11 6 5 11 8 12 6 3 2 1 5 6 10 5 3 4 4 4 8 5 6 11 7 7 8	Open. Hide. 46 35 51 47 62 62 62 62 62 59 59 62 62 49 62 62 44 30 62 62 62 62 62 62 62 59 62 59 59 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 42 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 39 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 54 58 58 54 52 58 58 58 58 58 58 54 48 58 58 58 58 58 38 46 58 58 54 58 54 52 54 58 58 54 52 54 58 58 58 58 58 58 58 58 58 58 54 54 58 54 54 58 58 58 54 58 58 51 58 58 58 58 51 51 58 58 58 58 58 47 58 52 58 58 58 50 58 53 58 49 54 54 48 58 54 58 58 58 58 54 51 58 49 58 58 54 50 44 48 50 58 37 58 43 58 58 46 51 51 50 48 41 38 51 46 58 49 58 46 51 58 58 46 40 58 58 39 38 27 41 41 39 40 44 26 39 41 38 41 44 54 41 21 41 33 18 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_35775993_35777186
seq2: B6Ng01-292L20.b_47_1236

seq1  GAATTCATAGCAGCTGGAACTTTATAGTATATAAAGACATTTTGAGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCAGCTGGAACTTTATAGTATATAAAGACATTTTGAGTCTT  50

seq1  TGCTGGGAATATCCTATGCTTTTTAGAGGTTATGTGTGCCCACAGAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAATATCCTATGCTTTTTAGAGGTTATGTGTGCCCACAGAATGG  100

seq1  CATCATAGCAGCACCATCTGCTATCTGTTTATGCTATTGCATTTGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGCAGCACCATCTGCTATCTGTTTATGCTATTGCATTTGCCAGG  150

seq1  TTACTTTTTACCACCATATATACTACGTTATGACAGTGAACAGATCTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTTACCACCATATATACTACGTTATGACAGTGAACAGATCTACT  200

seq1  AAAAATAGAAATACAGCATTATTTTAATTACAGCCGTTTCAATTGCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGAAATACAGCATTATTTTAATTACAGCCGTTTCAATTGCTCAT  250

seq1  CAATTCAACAATGAAAAATGGAAGGAGTACCACAAAGTTGCTGAGCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAACAATGAAAAATGGAAGGAGTACCACAAAGTTGCTGAGCTGTC  300

seq1  ATTTCTTTTAATAGCTCTTTACGAGTGTGGCTTGTACCGCTGGATAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTAATAGCTCTTTACGAGTGTGGCTTGTACCGCTGGATAGTGA  350

seq1  TTATGATCACTTTTGCAGGTGGGATGCACATCCTTCTTTCTAACAGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATCACTTTTGCAGGTGGGATGCACATCCTTCTTTCTAACAGCTAT  400

seq1  AAGTACTGAAGGAGGGTGGCAGGTCATAAACATAGGGACCCTTAATCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTGAAGGAGGGTGGCAGGTCATAAACATAGGGACCCTTAATCTTA  450

seq1  ATCTAAGAGTTTCACCCCCATCTATTCTCTTTTCAACCCTGAGTTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAGTTTCACCCCCATCTATTCTCTTTTCAACCCTGAGTTGTTTT  500

seq1  AGGATTTTCCCCCCTGCCATTACTTTGTTTCTTCTTATGGTGGAGAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTCCCCCCTGCCATTACTTTGTTTCTTCTTATGGTGGAGAAGAG  550

seq1  ACCAGATATAACAAAGGAAGTATGCAAGTTGTTTTTACCTAAGAGTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATATAACAAAGGAAGTATGCAAGTTGTTTTTACCTAAGAGTCATA  600

seq1  GTCAAGTTAAGAGTTCTTAGGTATGACTTCCCATGTCTTCAAATGCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTAAGAGTTCTTAGGTATGACTTCCCATGTCTTCAAATGCTGCA  650

seq1  CAGAAAGTGGACTGTGGTTGCCAGTGTGAAGTGTAGTATATTATTAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTGGACTGTGGTTGCCAGTGTGAAGTGTAGTATATTATTAGAAC  700

seq1  CTCTCTCAGTTGGCAGGGTTATACCAAGCATAGAAGGCTTGTGATAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCAGTTGGCAGGGTTATACCAAGCATAGAAGGCTTGTGATAAGTA  750

seq1  GAAAGATCTTCAGATCCTTCTATTAACTCATTGACTGTATCAGGGTCGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATCTTCAGATCCTTCTATTAACTCATTGACTGTATCAGGGTCGTG  800

seq1  GACTACAAGCAAAGATTTAGATCATATCATCTTGGTTATGAACATAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAAGCAAAGATTTAGATCATATCATCTTGGTTATGAACATAACAT  850

seq1  GAATGTGTTCTAGAAGTTTTCCATTGTGAAACTGGCTTTTGTATTTATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTTCTAGAAGTTTTCCATTGTGAAACTGGCTTTTGTATTTATTG  900

seq1  AGTAATTTTTAGATCTAATTAACTTTATAAATTAACTTTAAAAATTGGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTTTAGATCTAATTAACTTTATAAATTAACTTTAAAAATTGGCC  950

seq1  ACATAATACAAATAATGTTATGGTACCTTTCACAATAT-ATAACACTTGA  999
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  ACATAATAC-AATAATGTTATGGTACCTTTCACAATATAATAACACTTGA  999

seq1  TAATTCCAAAATAGAGACAAATATTTATCCATAATAGCTTTCTTCAAGCT  1049
      ||||||||||||||||   ||||||||| ||| |||||||||||||||||
seq2  TAATTCCAAAATAGAGGACAATATTTAT-CAT-ATAGCTTTCTTCAAGCT  1047

seq1  AAGAAGTTGTTTAAATATCTTGATATTGTTTGACCATGAAAA-ATTAATC  1098
      |||||||  || |||||||||||||||||| || |||||||| || ||| 
seq2  AAGAAGTGTTTAAAATATCTTGATATTGTTGGA-CATGAAAATATCAAT-  1095

seq1  CATTTTGCTGAAATTCACTCAACCCATACTTGAATCCATTTGTAAATGTT  1148
        ||| ||||||  |||||| |||||||| |||   || |||||||||||
seq2  --TTTGGCTGAA--TCACTC-ACCCATACCTGA--TCAATTGTAAATGTT  1138

seq1  CTTGAATAATCAACT-GGTCAACCTGTTTGGATCAAC---------CAGT  1188
      | ||||| ||||||| |||||  ||||||||||||||           ||
seq2  C-TGAAT-ATCAACTGGGTCA--CTGTTTGGATCAACAGTCTCCTAAGGT  1184

seq1  TCTCTA  1194
      ||||||
seq2  TCTCTA  1190

seq1: chr6_35882727_35883319
seq2: B6Ng01-292L20.g_64_656 (reverse)

seq1  CCCCCTCACCCCCTCTCCCCCTGCTCCATGCTCTTGGCTATTTTACTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCACCCCCTCTCCCCCTGCTCCATGCTCTTGGCTATTTTACTTAG  50

seq1  CTTCCCCTTTTTGATTATTCTCTTCACCTTCACTAGTTTAAACTGTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTTTTTGATTATTCTCTTCACCTTCACTAGTTTAAACTGTTAGG  100

seq1  CCAATTTCCAGTATCCAGGAATTACCCAACATAAAAGCACCGCTCTAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTCCAGTATCCAGGAATTACCCAACATAAAAGCACCGCTCTAACC  150

seq1  GGTAAAGCAGACAATTTTTATGTGACCAGTTCCTCTGAGACATTTCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGCAGACAATTTTTATGTGACCAGTTCCTCTGAGACATTTCTGCT  200

seq1  GGTTTTGGACAAATCAGAGGAGTATTCACCTCGTTTCCCAGCTGTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGGACAAATCAGAGGAGTATTCACCTCGTTTCCCAGCTGTTCTGG  250

seq1  CATAACCTCATTTTCTGTAAAGAGTCATGGGATGTGCTTGGCCAAAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCTCATTTTCTGTAAAGAGTCATGGGATGTGCTTGGCCAAAGAAC  300

seq1  CAGGAGACAGAGCAAGCAGTCATCTGGCTGAAGCATGACAGGGCTTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACAGAGCAAGCAGTCATCTGGCTGAAGCATGACAGGGCTTCAGA  350

seq1  TCGCCTGTCACCAGGCCACTGAGGGCGCTGCAAGTACTCTCCATGGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTGTCACCAGGCCACTGAGGGCGCTGCAAGTACTCTCCATGGCTGC  400

seq1  CACTCAAGAATGCTGTTATACAGGCAGTTATTTTTAGAAGCTATATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAGAATGCTGTTATACAGGCAGTTATTTTTAGAAGCTATATAATA  450

seq1  TTGGTTTCTATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCTATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACA  500

seq1  AAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATC  550

seq1  CAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTC  593
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTC  593

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information