BAC Information

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BAC

Clone NameB6Ng01-293D02
Chromosome6 (Build37)
Map Location 5,721,623 - 5,722,111
singlet/doubletsinglet
Overlap geneDync1i1
Upstream geneLOC100040018, Ppp1r9a, Pon1, Pon3, Pon2, Asb4, Pdk4
Downstream geneSlc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293D02.bB6Ng01-293D02.g
ACCGA089634GA089635
length1,225485
definitionB6Ng01-293D02.b B6Ng01-293D02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtattaatctatttactttacaccccaaccttctccctcct
cacctcacctcctaaccatccccctgtctgccctttctactcagaaatgg
ctcataaaaggggaggccttctatggatgtcaacctgccttgtcatctcg
agttgtctatatgttcattgtcagaatattgtcagtcccatagcaaacac
caaatacagctaggcacatctccctgttgcagctaggcaaggcagttagc
agaaagggatctaaaagcaagcagagtcagagacagcccctgcttctgcc
ttaggagtcctatatgaagacccaggtacacaactgttacatatgtgcac
agggcctatgtccttcccatgcatgctctctggttggtagctcaggggtt
agtggattctgtggggtttcttgtggtgttcttcacctctggtttcttca
atccttatccccctcttccagagaattgccagagctccctccaatgtttg
gctgtagacataaattttttccaacctactttagtaaatgttcaacctct
cctctagcccaccacccaccagaggtagtgaaagagaaaagttattagga
aacaaggaaagtagacctgtttagaaatatttggggtgggggagcaagcc
cagtcttctttgtcagaatatcagcagttcaaccccttggcaaacacaaa
tgtgaatcagcaactatagttcaatcctctcagtaggcagacaccacata
tgaaccagcagcttcagttcaattctgaagaagctgcaaggctcaccaag
tgcccaaagctgtggaagcagcaaaagcccacaggaactccatgagaagt
tctttggtcagtttctctctggcagcaccactagtggagctcagcaattg
caaatgtaaagtgaatcaagcttgttgttagtgaagaatagcgttgcaga
gcaaagcaagccaatcctcgagcatctactgtctggggagccttatgaat
agtccttcatcatgttgccctttcatgagtctgctaatagaaaaacatcc
tttgacctgtgcttacttcagcaaaacattctttccactgttgtactgta
ctgctagttttgtgtcaacttgaaccaagcttgaattattcacagagaaa
aggaacttcagtgagaatgcttcatgagaaaatccaacctgtaaggccat
tttcttcaaaattaggtgatactag
taaaatctggaggaggatattctcctatactgaaacacatgcctacttta
ctaaagcaaaagcatatatctgtctggaaatttacattcaaaacaagggc
aaacgtgtcctaaaatattcctaattcattcttctcaggtagagtatatg
cttggttgttattgttggtggttttgttttgttttgttttgttttgtttt
tgagaataattcttttatttttccctgccattttttttgaattctattga
aacaatgaatgtggacttttgcagggatttgctctctggctcgtatctac
ctactctcttcagaacttggctaataatgaagtaaaactctctagagttt
gactctggagaaaaggaactgcctcttttcttttaaagcaatgcaccagg
tttaaacatgaaatttttctcgcacctttaagattgcaaaaggaaagaag
ggtcttatgaggagcagtacttgctactgtcccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_5721623_5722111
seq2: B6Ng01-293D02.g_66_556 (reverse)

seq1  TGGGGACAGTAGCAAGTACTGCTCCTCATAAGACCCTTCTTTCCTTTTAC  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGGGACAGTAGCAAGTACTGCTCCTCATAAGACCCTTCTTTCCTTTTGC  50

seq1  CTTCTTAAAGGTGTGTG-TGTGTTTCATGTTTAAACCTGGTGCATTGCTT  99
        ||||||||||| | |     ||||||||||||||||||||||||||||
seq2  AATCTTAAAGGTGCGAGAAAAATTTCATGTTTAAACCTGGTGCATTGCTT  100

seq1  T-AAAGGAGAGAGGCAGTTCCTTTTCTCCAGAGTCAAACTCTAGAGAGTT  148
      | |||| | |||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAAAGAGGCAGTTCCTTTTCTCCAGAGTCAAACTCTAGAGAGTT  150

seq1  TTACTTCATTATTAGCCAAGTTCTGAAGAGAGTAGGTAGCTACGAGCCAG  198
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTACTTCATTATTAGCCAAGTTCTGAAGAGAGTAGGTAGATACGAGCCAG  200

seq1  AGAGCAAATCCCTGCAAAAGTCCACATTCATTGTTTCAATAGAATTCAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAATCCCTGCAAAAGTCCACATTCATTGTTTCAATAGAATTCAAA  250

seq1  AAAAATGGCAGGGAAAAATAAAAGAATTATTCTCAAAAACAAAACAAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGCAGGGAAAAATAAAAGAATTATTCTCAAAAACAAAACAAAAC  300

seq1  AAAACAAAACAAAACCACCAACAATAACAACCAAGCATATACTCTACCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACCACCAACAATAACAACCAAGCATATACTCTACCTG  350

seq1  AGAAGAATGAATTAGGAATATTTTAGGACACGTTTGCCCTTGTTTTGAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATGAATTAGGAATATTTTAGGACACGTTTGCCCTTGTTTTGAAT  400

seq1  GTAAATTTCCAGACAGATATATGCTTTTGCTTTAGTAAAGTAGGCATGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTCCAGACAGATATATGCTTTTGCTTTAGTAAAGTAGGCATGTG  450

seq1  TTTCAGTATAGGAGAATATCCTCCTCCAGATTTTAGAATTC  489
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTATAGGAGAATATCCTCCTCCAGATTTTAGAATTC  491