BAC Information

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BAC

Clone NameB6Ng01-294M19
Chromosome6 (Build37)
Map Location 17,958,049 - 17,959,198
singlet/doubletsinglet
Overlap geneWnt2
Upstream geneTes, EG232599, Cav2, Cav1, Met, Capza2, St7
Downstream geneAsz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294M19.bB6Ng01-294M19.g
ACCGA090835GA090836
length1,1591,163
definitionB6Ng01-294M19.b B6Ng01-294M19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcagttttaaatagtttaaaaatagtttaataagagacaaaa
aaagtgcttgacaattgtagccatattgaacagagcaagggattgtgaaa
tagagcaggcttcagaaagggttaaattcaagccctggggtcatttcaga
gccatagttagaggatttgtcatgggggaaggttattacagaactgtacc
ctgctcagcctaggataacagggaagacactgggcaagtacatagaacgc
ttatctatccccttagctagaattctgtgcaagcaagaattctgctgatc
tgcatattttgactttttgccacatacgttcctgttagttcatgtttctt
cagaatctgcacactatcaacctgcttgcatgtattttctgtgcagtctc
aatgtgaattagacagagcacaagcctggaacccaagggcaggcatctgc
aattacacaaaatggcctgctaaaaagtataggcatccaattaggttgta
gcacattgctgtcggaaggaattctcttaacttacctgcctctcggtccc
tgatacagtagtctggagaattctcaaaatacacgaggtcatttttcgtt
ggcttcttaaacctcttattggctacagtgaagccagtgccatcctggtt
catgactacctggatggccccattgtacttcctccagagatagtcgcctg
ttttcctgaagtcagccatggccagccagcatgtcctcagagtacaggag
ccactcacaccatgacacttgcattcttgtttcaagaagcgctttacagc
ctgcaggaagagacagaggcacgctcagtctggcagcctaagtacaggac
ccagggatgcgtttccctacctcagcactagagacgtagctctgagaagg
ctggatcctggggtcctagaacgtcacttgccatttgctggacaccagat
tgataaagcaattactcatctttcagtgacccagcaattggaaattaagt
ggctcatatgggaaagcttgccataatatcgggcaccaataagggttgca
gagtgcaccccccctcctcatggcccttatggaacctgcaggacctacgc
taccattaacctttaggagggaggaagagcgattctagagtcagtaatgc
tctgtctaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccatgagat
tccacctcacaccagtcagaatgtctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttccaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgccccttcttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgtcaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgcccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaagtacccaagagctaagggatctgcacctaata
gttgatcaacattatgactaccagtacccgagctcttgactctagctgca
tatattatccaaaagattgcttagtcgcattcactgaaaagagagcccat
gacacgcaactatgccgaaacaggttacgcagttcaaaaggtgaaatgga
ccgcgtatggaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17958049_17959198
seq2: B6Ng01-294M19.b_47_1205

seq1  GAATTCTTGCAGTTTTAAATAGTTTAAAAATAGTTTAATAAGAGACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCAGTTTTAAATAGTTTAAAAATAGTTTAATAAGAGACAAAA  50

seq1  AAAGTGCTTGACAATTGTAGCCATATTGAACAGAGCAAGGGATTGTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTTGACAATTGTAGCCATATTGAACAGAGCAAGGGATTGTGAAA  100

seq1  TAGAGCAGGCTTCAGAAAGGGTTAAATTCAAGCCCTGGGGTCATTTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCAGGCTTCAGAAAGGGTTAAATTCAAGCCCTGGGGTCATTTCAGA  150

seq1  GCCATAGTTAGAGGATTTGTCATGGGGGAAGGTTATTACAGAACTGTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGTTAGAGGATTTGTCATGGGGGAAGGTTATTACAGAACTGTACC  200

seq1  CTGCTCAGCCTAGGATAACAGGGAAGACACTGGGCAAGTACATAGAACGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGCCTAGGATAACAGGGAAGACACTGGGCAAGTACATAGAACGC  250

seq1  TTATCTATCCCCTTAGCTAGAATTCTGTGCAAGCAAGAATTCTGCTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATCCCCTTAGCTAGAATTCTGTGCAAGCAAGAATTCTGCTGATC  300

seq1  TGCATATTTTGACTTTTTGCCACATACGTTCCTGTTAGTTCATGTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTTTGACTTTTTGCCACATACGTTCCTGTTAGTTCATGTTTCTT  350

seq1  CAGAATCTGCACACTATCAACCTGCTTGCATGTATTTTCTGTGCAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTGCACACTATCAACCTGCTTGCATGTATTTTCTGTGCAGTCTC  400

seq1  AATGTGAATTAGACAGAGCACAAGCCTGGAACCCAAGGGCAGGCATCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAATTAGACAGAGCACAAGCCTGGAACCCAAGGGCAGGCATCTGC  450

seq1  AATTACACAAAATGGCCTGCTAAAAAGTATAGGCATCCAATTAGGTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACAAAATGGCCTGCTAAAAAGTATAGGCATCCAATTAGGTTGTA  500

seq1  GCACATTGCTGTCGGAAGGAATTCTCTTAACTTACCTGCCTCTCGGTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTGCTGTCGGAAGGAATTCTCTTAACTTACCTGCCTCTCGGTCCC  550

seq1  TGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCATTTTTCGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGTAGTCTGGAGAATTCTCAAAATACACGAGGTCATTTTTCGTT  600

seq1  GGCTTCTTAAACCTCTTATTGGCTACAGTGAAGCCAGTGCCATCCTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTTAAACCTCTTATTGGCTACAGTGAAGCCAGTGCCATCCTGGTT  650

seq1  CATGACTACCTGGATGGCCCCATTGTACTTCCTCCAGAGATAGTCGCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTACCTGGATGGCCCCATTGTACTTCCTCCAGAGATAGTCGCCTG  700

seq1  TTTTCCTGAAGTCAGCCATGGCCAGCCAGCATGTCCTCAGAGTACAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGAAGTCAGCCATGGCCAGCCAGCATGTCCTCAGAGTACAGGAG  750

seq1  CCACTCACACCATGACACTTGCATTCTTGTTTCAAGAAGCGCTTTACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCACACCATGACACTTGCATTCTTGTTTCAAGAAGCGCTTTACAGC  800

seq1  CTGCAGGAAGAGACAGAGGCACGCTCAGTCTGGCAGCCTAAGTACAGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGAAGAGACAGAGGCACGCTCAGTCTGGCAGCCTAAGTACAGGAC  850

seq1  CCAGGGATGCGTTTCCCTACCTCAGCACTAGAGACGTAGCTCTGAGAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATGCGTTTCCCTACCTCAGCACTAGAGACGTAGCTCTGAGAAGG  900

seq1  CTGGATCCTGGGGTCCTAGAACGTCACTTGCCATTTGCTGGACACCAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCTGGGGTCCTAGAACGTCACTTGCCATTTGCTGGACACCAGAT  950

seq1  TGATAAAGCAATTACTCATCTTTCAGTGACCCAGCAATTGGAAATTAAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGCAATTACTCATCTTTCAGTGACCCAGCAATTGGAAATTAAGT  1000

seq1  GGCTTCATAT-GGAAAGCTTGCCAT-ATATCGGGCAC--AT-AGGGTTGC  1045
      ||| |||||| |||||||||||||| |||||||||||  || ||||||||
seq2  GGC-TCATATGGGAAAGCTTGCCATAATATCGGGCACCAATAAGGGTTGC  1049

seq1  AGAGTGCACCCCCTCTC--AATGG-CCTTATG--AACTGCA-GACCTACG  1089
      ||||||||||||| |||   |||| |||||||  | ||||| ||||||||
seq2  AGAGTGCACCCCCCCTCCTCATGGCCCTTATGGAACCTGCAGGACCTACG  1099

seq1  CTACCATTTAACCTTAGGA-GGAGGAAGAGCGAATCCTAGAGTCAGTAAT  1138
      |||||||| | | |||||| |||||||||||| || ||||||||||||||
seq2  CTACCATTAACCTTTAGGAGGGAGGAAGAGCG-ATTCTAGAGTCAGTAAT  1148

seq1  GCTCTTGTCTAA  1150
      |||| |||||||
seq2  GCTC-TGTCTAA  1159