BAC Information

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BAC

Clone NameB6Ng01-295B02
Chromosome6 (Build37)
Map Location 6,809,110 - 6,810,188
singlet/doubletsinglet
Overlap genenone
Upstream geneDync1i1, Slc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826
Downstream geneDlx6as, Dlx5, Acn9, EG667500, Tac1, LOC667511, Asns, EG667529, C1galt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295B02.bB6Ng01-295B02.g
ACCGA091035GA091036
length1,0861,166
definitionB6Ng01-295B02.b B6Ng01-295B02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccttaaatgaggaaagaactagcaggaatttttccaccaatgt
ctcccattgagaaggggattcttaatgtggctatgtaaatcaacaccgag
ttatttctttgaattcaaaggccatttatccaggtctaatttctttagaa
ttaacgtgataactgagcccaacttagcaaccaaacccagccaaatcctg
gacggcttgaatttactgccacagcccccaccaacactgcaaaccttccc
gggagatccaggcattctcagccctacgcttgtctgcaaacatcctccag
aaccaaactgggacgaatctcagacccaatggacccgctcctacacacct
attctggcaagatagaagcaggggtgttcagaagtcagtgtgttagtcct
acttatcatggccagtagtccacaacatctcaacaccttaacaccttaga
aaaataaaatgcaatttaggcctccaatcccgcttcctaaaacttcaatg
gatatcattcttatcttacagtaacaggccctttaaaaaaacggcttagg
cctccaggtttctaagtttacttgtaatttgaatgataaaggcttcagtg
gcctttctagcccaccttcccctcccactggcaagagttggcgtaggttc
cccagagagcgaaacaaagaggaaggagcctggactgcgcgggaggcgcc
ggcccgagagcccctgaggtgtgcgtcttttttttttttttttttctgca
aagctctgaaaagcccgaaatttggtaaccgaagagctggtagcaggttg
cactacagtaaagtaggggtgccttctttaacataaaattaacataaatg
ctccagacaccaggcgacgggctaggaacggaactgcccaacttcagttt
tgtgcacagctccgcgcgaagaacactgcactttttgctggggggcagag
gccacatttggtggcaagcactagctgcccaacctttgggccacgctagt
cttccgccgtcttgtttcctgggagtggggacgggttattcctaggctct
atccgaacaagacaccggaaatcgctgtcagccgag
gaattcaatgaaaatgaatgcacgacatacacagatttatgggaaacaat
gaaagcagtgctaagaggaaagatcataacactgagtgcctttattaaag
aaatcagtgtggtcttatattaaggacttaacagcatacttgaaagctct
agaacaaaaacaaccaaacacactcaagaggtagagagagcaggaaatag
tcaaactaagggttgaaatcaataaaacgaacaaagagaacaatacaaag
aatcaaagaaaccaagagttggttcttagagaaaatcaacatgatagatg
aaacctttaaccaaaataaataaaagacaagagagaaaatacccaaatta
ataaaaccagaaatgagaagggaaatataatgacaggaactgatgaaacc
caaagaattagagtataattcaaaaacctaacatgaaaactaagaattga
aaaatctggaaaaaaaaaaaaagacaactttcttaatagataccacttaa
ccaaagttaaatgaagatcagataaacaatttaaatatacctaataaccc
ctaaggacagtcattaattaacagtcattaaacgactcccaaccaacaaa
aagcccagtgccagatggatttagcacaaaattctaccagactttcaaag
aaaacctaataccaataatctgcaaattattccacaagacagaaacagaa
gaaacattgtcaaatacatttttatgacaccacagtcatgcagttaccta
aaccacacaaagactcaacaaagaaaaatatttcagaccagtttcactta
ttgaacactgatgcaaaaatatacaataaaacactggcaaacagaatcca
agaacacatcaaaaagatcatccaccatgatcaagtaggcttcattccaa
agatgcaggagatggttcaatatacagaaatccatcaatacaatccacca
ttttaaacaaactgaaaggaaaaaaaaaaaacacatgggtaatctcatta
gatctggaaaagggccttaggaggactctataccccatcatgattaaagt
ctagcagatcaggatatagcacataccttagaactattaagggccatata
caggcaggctataggcacatcaatattggagagaacacttagaagccaat
tcactaaaattgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_6809110_6810188
seq2: B6Ng01-295B02.b_48_1133

seq1  GAATTCACCTTAAATGAGGAAAGAACTAGCAGGAATTTTTCCACCAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTAAATGAGGAAAGAACTAGCAGGAATTTTTCCACCAATGT  50

seq1  CTCCCATTGAGAAGGGGATTCTTAATGTGGCTATGTAAATCAACACCGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTGAGAAGGGGATTCTTAATGTGGCTATGTAAATCAACACCGAG  100

seq1  TTATTTCTTTGAATTCAAAGGCCATTTATCCAGGTCTAATTTCTTTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTTTGAATTCAAAGGCCATTTATCCAGGTCTAATTTCTTTAGAA  150

seq1  TTAACGTGATAACTGAGCCCAACTTAGCAACCAAACCCAGCCAAATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGTGATAACTGAGCCCAACTTAGCAACCAAACCCAGCCAAATCCTG  200

seq1  GACGGCTTGAATTTACTGCCACAGCCCCCACCAACACTGCAAACCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGCTTGAATTTACTGCCACAGCCCCCACCAACACTGCAAACCTTCCC  250

seq1  GGGAGATCCAGGCATTCTCAGCCCTACGCTTGTCTGCAAACATCCTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATCCAGGCATTCTCAGCCCTACGCTTGTCTGCAAACATCCTCCAG  300

seq1  AACCAAACTGGGACGAATCTCAGACCCAATGGACCCGCTCCTACACACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACTGGGACGAATCTCAGACCCAATGGACCCGCTCCTACACACCT  350

seq1  ATTCTGGCAAGATAGAAGCAGGGGTGTTCAGAAGTCAGTGTGTTAGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCAAGATAGAAGCAGGGGTGTTCAGAAGTCAGTGTGTTAGTCCT  400

seq1  ACTTATCATGGCCAGTAGTCCACAACATCTCAACACCTTAACACCTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCATGGCCAGTAGTCCACAACATCTCAACACCTTAACACCTTAGA  450

seq1  AAAATAAAATGCAATTTAGGCCTCCAATCCCGCTTCCTAAAACTTCAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATGCAATTTAGGCCTCCAATCCCGCTTCCTAAAACTTCAATG  500

seq1  GATATCATTCTTATCTTACAGTAACAGGCCCTTTAAAAAAACGGCTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCATTCTTATCTTACAGTAACAGGCCCTTTAAAAAAACGGCTTAGG  550

seq1  CCTCCAGGTTTCTAAGTTTACTTGTAATTTGAATGATAAAGGCTTCAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGGTTTCTAAGTTTACTTGTAATTTGAATGATAAAGGCTTCAGTG  600

seq1  GCCTTTCTAGCCCACCTTCCCCTCCCACTGGCAAGAGTTGGCGTAGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCTAGCCCACCTTCCCCTCCCACTGGCAAGAGTTGGCGTAGGTTC  650

seq1  CCCAGAGAGCGAAACAAAGAGGAAGGAGCCTGGACTGCGCGGGAGGCGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGAGCGAAACAAAGAGGAAGGAGCCTGGACTGCGCGGGAGGCGCC  700

seq1  GGCCCGAGAGCCCCTGAGGTGTGCGTC--TTTTTTTTTTTTTTTTCTGCA  748
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  GGCCCGAGAGCCCCTGAGGTGTGCGTCTTTTTTTTTTTTTTTTTTCTGCA  750

seq1  AAGCTCTGAAAAGCCCGAAATTTGGTAACCGAAGAGCTGGTAGCAGGTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGAAAAGCCCGAAATTTGGTAACCGAAGAGCTGGTAGCAGGTTG  800

seq1  CACTACAGTAAAGTAGGGGTGCCTTCTTTAACATAAAATTAACATAAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAGTAAAGTAGGGGTGCCTTCTTTAACATAAAATTAACATAAATG  850

seq1  CTCCAGACACCAGGCGACGGGCTAGGAACGGAACTGCCCAACTTCAG-TT  897
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCCAGACACCAGGCGACGGGCTAGGAACGGAACTGCCCAACTTCAGTTT  900

seq1  TGTGCACAGCTCCGCGCGAAGAACACTGCAC-TTTTGCT-GGGGGCAGAG  945
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  TGTGCACAGCTCCGCGCGAAGAACACTGCACTTTTTGCTGGGGGGCAGAG  950

seq1  GCCACATT--GTGGCAAGCACTAGCTGCCC-ACCTTTGGGCCACGCTAGT  992
      ||||||||  |||||||||||||||||||| |||||||||||||||||||
seq2  GCCACATTTGGTGGCAAGCACTAGCTGCCCAACCTTTGGGCCACGCTAGT  1000

seq1  CTTCCGCCGTC-TGTTTCCTGGGAAGTGGGAC-GGTTATTCCTAGGCTTC  1040
      ||||||||||| ||||||||||||   ||||| |||||||||||||| ||
seq2  CTTCCGCCGTCTTGTTTCCTGGGAGTGGGGACGGGTTATTCCTAGGC-TC  1049

seq1  TATCCCGAACAAGAACACC-GAAACCGCTGTCCAGCCGAG  1079
      ||| ||||||||| ||||| |||| |||||| ||||||||
seq2  TAT-CCGAACAAG-ACACCGGAAATCGCTGT-CAGCCGAG  1086