BAC Information

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BAC

Clone NameB6Ng01-295C22
Chromosome6 (Build37)
Map Location 117,337,165 - 117,337,513
singlet/doubletsinglet
Overlap geneEG640142
Upstream geneMarch8, Alox5, LOC100043432, Olfr211, Olfr212, Olfr213, EG434080, Olfr214, Olfr215, Zfp422, Rassf4, 8430408G22Rik, C230095G01Rik, LOC100043439, Cxcl12, LOC213422
Downstream geneLOC100043777, LOC621462, EG640370, EG621705, LOC100043779, Zfp637, Zfp239, 4933440N22Rik, Hnrpf, Fxyd4, LOC232338, Rasgef1a, Galnact2, Ret, 1700069P05Rik, Bms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295C22.bB6Ng01-295C22.g
ACCGA091117GA091118
length1,220343
definitionB6Ng01-295C22.b B6Ng01-295C22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacggaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccct
atagtggaacaacattatgagctaaccagtaccccggagctcttgacttc
tagctgcatattatattcaaaagaatggccctagtcggccatcactggaa
ggaagaggccccatttggaacttgcaacttttataattgccccagtacag
ggaataccatggtccaaaaagcggaaatgggtttggcacagagcgagata
gtagtggtgtgtcatactac
aataaagctgattgacatcctcctcaaattccttgacctctttgataaaa
tatgtgattgtttttttcaaattcttgttctggggctcatctaggtagct
gtcatcaaagaacaattctgtggaggcttgtgggccagtgctggggttct
gtgatcagagatggaccaggtaaagcttgtggatgagatgtttgattgga
ccaggcatggatagcaccaaatcatggttcccgagcttggtctgtgagta
ttgagatggcagtgggtgggggaaagggtgggagagaaaagaccatcggt
ctggggctaggccttcagtgggaggtgggggggagagaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_117337165_117337513
seq2: B6Ng01-295C22.g_65_413

seq1  GAATTCAATAAAGCTGATTGACATCCTCCTCAAATTCCTTGACCTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAGCTGATTGACATCCTCCTCAAATTCCTTGACCTCTTTG  50

seq1  ATAAAATATGTGATTGTTTTTTTCAAATTCTTGTTCTGGGGCTCATCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATGTGATTGTTTTTTTCAAATTCTTGTTCTGGGGCTCATCTAG  100

seq1  GTAGCTGTCATCAAAGAACAATTCTGTGGAGGCTTGTGGGCCAGTGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTCATCAAAGAACAATTCTGTGGAGGCTTGTGGGCCAGTGCTGG  150

seq1  GGTTCTGTGATCAGAGATGGACCAGGTAAAGCTTGTGGATGAGATGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTGATCAGAGATGGACCAGGTAAAGCTTGTGGATGAGATGTTTG  200

seq1  ATTGGACCAGGCATGGATAGCACCAAATCATGGTTCCCGAGCTTGGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACCAGGCATGGATAGCACCAAATCATGGTTCCCGAGCTTGGTCTG  250

seq1  TGAGTATTGAGATGGCAGTGGGTGGGGGAAAGGGTGGGAGAGAAAAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTGAGATGGCAGTGGGTGGGGGAAAGGGTGGGAGAGAAAAGACC  300

seq1  ATTGGTCTGGGGCTAGGCCTTCAGTGGGAGGTGGGGGGGAGAGAGGAAA  349
      || ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTCTGGGGCTAGGCCTTCAGTGGGAGGTGGGGGGGAGAGAGGAAA  349