BAC Information

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BAC

Clone NameB6Ng01-295O14
Chromosome6 (Build37)
Map Location 131,248,834 - 131,249,946
singlet/doubletsinglet
Overlap geneStyk1
Upstream geneLOC100038898, Klra12, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik
Downstream geneCsda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295O14.bB6Ng01-295O14.g
ACCGA091660GA091661
length1,2031,115
definitionB6Ng01-295O14.b B6Ng01-295O14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgataaaaccaagttcacaaaatatctttccacgaatccagt
ccttcaaaagataataaagggaaaacaccaacagaggatggaaagtacac
cctagaaaaagcatgaaagtaatacttcaacaaacctaaaagaagacaac
cacaagaagagaatcccaactttaacaacagaaataacaggaagcaacaa
ttacttttctttaatttctcttaacatttaatcgactcaattcaccaata
aaaagacatagactagtagactggctatacaaacaggaccaaacattttg
ttgcttatagaaaaccaacctcagggaaaaagacagacactacctcagag
taaaaggctggaaaacaattttcgaagcaaatagtccaaagaaacaagct
ggagtacccattctaatatcaaataaaattgacttctaacccaaagttat
caaaaaagacaataaggggcacgggatacacatcaaagttaaaatcttcc
aagaggaactatcaattctgaatatctatgctccaaatgcaaggacatcc
acattcattaaagaaactttagtaaagcttaaagcacacagtgcacctca
cacaataatagtgggacacttcaacttcccactctcatcaatggacagat
cctggaaacagaaactaaacagagacactgtgaaactaacagaagttatg
aatcaaatggttttaacagatatccacagaacattttatcctaaaacaaa
aggatataccttcttctcagcacctcatggtaccttcttcaaaatcaaac
ctataagtggtcacaaaacaggactcaacagatacaaaaatattgaaatt
atcccatgcatcctatcagatcaccatggattaaggctgatcttcaataa
caacataaataatagaaagccaacgttgacctggaaattgaacaacactc
tactcaatgatatcttcgtcaaggaagaaataaaagagaattaaaggact
ttttagagtttaatgaaatgaagccacaaaatacccaacttatgggacaa
caatgaaagcagtcctaagaagaaaactcatagcttctggagtgctgcca
aaaaggaaacctagagaagagcacacacttaccattcttcaatcaagtca
aagcttctagaattaaaggagcccaaggtcaccccaattgaaagggagag
cta
gaattcatgagaaagaaaattctaggttctttttgctaagaggtgttaag
gtgagtcaatatatccttcaaggaaaggctttgtctcatctatgttgacg
ggacgtaaaagtcctcgtcccgttatgaagagctgaagaagatctataag
aaacaatactgagcctttccttgactatagatagaagagcatcctttcat
tgaactctgaggcaggtggaccatgcatgatactaagtttaattagaagc
aggaggagtcatttcatgattaggaacattgttcatcccatttgtttgcc
agttcctgtaagactaaggagaatcagcctatagagccaaagctagaacc
agggataaaaagtgtgtgtgtgtataacaaataggaagcatgaaagtcga
gcaagaagacttagtaacccaggtggtcattaagaggtacagagaagaag
taatcttataggaatggatggtagcttctaatttttaaccattcattgaa
ataactgtgaagcaactcattaaactagtatttattgaccaaaagtagac
ttttcaggtgtatagctgccaaaatctctataataaagaggctaaaagaa
aataaatgggagttattttactaggaaaattagagaacctatagtttcca
aaaagagattctttatgtgcaaaatgagataactctctacctcacagggt
tggtgtgaggaacaatgagaatatgtatttgtgtattatgtagaatataa
tatattctcaataaatactagtttttcccctttctaactcggaaaatttc
ttttctttcttctttttttccccattttaaaaacaaaacatatactgtgg
taaaaaacacaggccagtgatagcacatggtagaacatgcctaaaagatg
gtgttctggtatgagcagcacatgataaattgtcaccatggttttgtttt
atttttctagcactgagaatttgaaacccagggccttacacacacaggga
aatgctctaatactggtctgagctatcatgttttgtgggctgtgggcttt
gggctgatgactatagtctcatggaattcaaataactgtaagtatcacag
tgagggtaattctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131248834_131249946
seq2: B6Ng01-295O14.g_72_1186 (reverse)

seq1  ATAGAATTACCCTCACTGTGATACTTACAGTATTTTGAAAT-CATGGAAG  49
      |||||||||||||||||||||||||||||||  |||||| | ||||  ||
seq2  ATAGAATTACCCTCACTGTGATACTTACAGTTATTTGAATTCCATG--AG  48

seq1  ACTATAGTCATCAGCCCAAAGCCCACAGCCCACAAAAACATGATAGCTCA  99
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  ACTATAGTCATCAGCCCAAAGCCCACAGCCCAC-AAAACATGATAGCTC-  96

seq1  AGACCAGTA-TAGAGCATTTCCCTGTGTGTGTAAGGCCCTGGGTT--CAA  146
      ||||||||| |||||||||||||||||||||||||||||||||||   ||
seq2  AGACCAGTATTAGAGCATTTCCCTGTGTGTGTAAGGCCCTGGGTTTCAAA  146

seq1  TTCTCAGTGCTAG-AAAATAAA--CAAACCATGGTGACAATTTAATCATG  193
      ||||||||||||| ||||||||   |||||||||||||||||| ||||||
seq2  TTCTCAGTGCTAGAAAAATAAAACAAAACCATGGTGACAATTT-ATCATG  195

seq1  TGCTGCTCATACCAGAACACCATCTTTTAGGCATGTTCTACCATGTGCTA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCATACCAGAACACCATCTTTTAGGCATGTTCTACCATGTGCTA  245

seq1  TCACTGGCCTGTGTTTTTTACCACAGTATATGTTTTGTTTTTAAAATGGG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGCCTGTGTTTTTTACCACAGTATATGTTTTGTTTTTAAAATGGG  295

seq1  GAAAAAAAGAAGAAAGAAAAGAAATTTTCCGAGTTAGAAAGGGGAAAAAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAGAAGAAAGAAAAGAAATTTTCCGAGTTAGAAAGGGGAAAAAC  345

seq1  TAGTATTTATTGAGAATATATTATATTCTACATAATACACAAATACATAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTATTGAGAATATATTATATTCTACATAATACACAAATACATAT  395

seq1  TCTCATTGTTCCTCACACCAACCCTGTGAGGTAGAGAGTTATCTCATTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTGTTCCTCACACCAACCCTGTGAGGTAGAGAGTTATCTCATTTT  445

seq1  GCACATAAAGAATCTCTTTTTGGAAACTATAGGTTCTCTAATTTTCCTAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAAGAATCTCTTTTTGGAAACTATAGGTTCTCTAATTTTCCTAG  495

seq1  TAAAATAACTCCCATTTATTTTCTTTTAGCCTCTTTATTATAGAGATTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAACTCCCATTTATTTTCTTTTAGCCTCTTTATTATAGAGATTTT  545

seq1  GGCAGCTATACACCTGAAAAGTCTACTTTTGGTCAATAAATACTAGTTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTATACACCTGAAAAGTCTACTTTTGGTCAATAAATACTAGTTTA  595

seq1  ATGAGTTGCTTCACAGTTATTTCAATGAATGGTTAAAAATTAGAAGCTAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTGCTTCACAGTTATTTCAATGAATGGTTAAAAATTAGAAGCTAC  645

seq1  CATCCATTCCTATAAGATTACTTCTTCTCTGTACCTCTTAATGACCACCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTCCTATAAGATTACTTCTTCTCTGTACCTCTTAATGACCACCT  695

seq1  GGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATACA  745

seq1  CACACACACTTTTTATCCCTGGTTCTAGCTTTGGCTCTATAGGCTGATTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACTTTTTATCCCTGGTTCTAGCTTTGGCTCTATAGGCTGATTC  795

seq1  TCCTTAGTCTTACAGGAACTGGCAAACAAATGGGATGAACAATGTTCCTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTCTTACAGGAACTGGCAAACAAATGGGATGAACAATGTTCCTA  845

seq1  ATCATGAAATGACTCCTCCTGCTTCTAATTAAACTTAGTATCATGCATGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAATGACTCCTCCTGCTTCTAATTAAACTTAGTATCATGCATGG  895

seq1  TCCACCTGCCTCAGAGTTCAATGAAAGGATGCTCTTCTATCTATAGTCAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTGCCTCAGAGTTCAATGAAAGGATGCTCTTCTATCTATAGTCAA  945

seq1  GGAAAGGCTCAGTATTGTTTCTTATAGATCTTCTTCAGCTCTTCATAACG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCTCAGTATTGTTTCTTATAGATCTTCTTCAGCTCTTCATAACG  995

seq1  GGACGAGGACTTTTACGTCCCGTCAACATAGATGAGACAAAGCCTTTCCT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAGGACTTTTACGTCCCGTCAACATAGATGAGACAAAGCCTTTCCT  1045

seq1  TGAAGGATATATTGACTCACCTTAACACCTCTTAGCAAAAAGAACCTAGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATATATTGACTCACCTTAACACCTCTTAGCAAAAAGAACCTAGA  1095

seq1  ATTTTCTTTCTCATGAATTC  1113
      ||||||||||||||||||||
seq2  ATTTTCTTTCTCATGAATTC  1115