BAC Information

Click to search

BAC

Clone NameB6Ng01-297H23
Chromosome6 (Build37)
Map Location 9,522,272 - 9,522,549
singlet/doubletsinglet
Overlap genenone
Upstream geneGlcci1, Ica1, LOC100040238, Nxph1
Downstream geneLOC330264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297H23.bB6Ng01-297H23.g
ACCGA092840GA092841
length1,046278
definitionB6Ng01-297H23.b B6Ng01-297H23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcctttcccgttcagaatttactctggtcacagggaattggg
gtgaatatgtgtggttgatctcaccacccatagcccaagaaaccctgagt
ccattttgtctcatacactgttgatctcttggttccttcagatatctgtg
aatagagaccaggacactatcacagaaaacatgcaatcttgtgttaaatt
acctgtccttatttattttatcaacactattgacattaagaagatgtatt
tggaaaaagcatttgacaagatccaacacccattcatgataaaagttttg
gaaagatcaggaattcaaggcccatacctaaacatgataaaagcaatcta
cagcaaaccagtagccaacatcaaagtaaatggagagaagctggaagcaa
tcccactaaaatcagggactagacaaggctgcccactttctccctacctt
ttcaacatagtacttgaagtattagccagagcaattcgacaacaaaagga
gatcaaggggatacaaattggaaaagaggaagtcaaaatatcactttttg
cagatgatatgatagtatatataagtgaccctaaaaattctaccagagaa
ctcctaaacctgataaacagcttcggtgaagtagctggatataaaataaa
ctcaaacaagtcaatggcctttctctatacaaagaataaacaggctgaga
aagaaattagggaaacaacacccttctcaatagtcacaaataatataaaa
tatcttggcgtgactctaactaaggaggtgaaagatctgtatgataaaat
cttcaaatctctgaagaaagaaattaaagaagatctcagaagatggaaag
atctcccatgctcatggattggcaggatcaacattgtaaaaatggctatc
ttgccaaaagcaatctacagattcaatgcaatccccatcaaaattccaac
tcaaattcttcaacgaattggaaggagcaatttgcaattgtctggaatac
aaaaaacctaggatagcaaaagtcttctcagataaaagaacttctg
ccttcagaaaacaaatatgccactctttaatgttggtttgaatctcatta
tgaaattgcaagcaaaatgagacacactttgcctcactttgcctctgaaa
cagtgaatctacagcaaatcaactgttccctaacaaagcaagtctgctaa
ttcttgtgagattttaatattctttgaaagcacaacattttttagaatat
taaaacttgctttctatctattatacattgaaaaattagagttgatgtgg
tgatagtgatggtggtatggtggcaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_9522272_9522549
seq2: B6Ng01-297H23.g_74_351

seq1  CCTTCAGAAAACAAATATGCCACTCTTTAATGTTGGTTTGAATCTCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAAAACAAATATGCCACTCTTTAATGTTGGTTTGAATCTCATTA  50

seq1  TGAAATTGCAAGCAAAATGAGACACACTTTGCCTCACTTTGCCTCTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGCAAGCAAAATGAGACACACTTTGCCTCACTTTGCCTCTGAAA  100

seq1  CAGTGAATCTACAGCAAATCAACTGTTCCCTAACAAAGCAAGTCTGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATCTACAGCAAATCAACTGTTCCCTAACAAAGCAAGTCTGCTAA  150

seq1  TTCTTGTGAGATTTTAATATTCTTTGAAAGCACAACATTTTTTAGAATAT  200
      |||||||||||||||||||||||||||||||                |||
seq2  TTCTTGTGAGATTTTAATATTCTTTGAAAGCNNNNNNNNNNNNNNNNTAT  200

seq1  TAAAACTTGCTTTCTATCTATTATACATTGAAAAATTAGAGTTGATGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTGCTTTCTATCTATTATACATTGAAAAATTAGAGTTGATGTGG  250

seq1  TGATAGTGATGGTGGTATGGTGGCAATA  278
      ||||||||||||||||||||||||||||
seq2  TGATAGTGATGGTGGTATGGTGGCAATA  278