BAC Information

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BAC

Clone NameB6Ng01-297I02
Chromosome6 (Build37)
Map Location 63,308,076 - 63,487,064
singlet/doubletdoublet
Overlap geneGrid2
Upstream geneC130092O11Rik, GA_x5J8B7W6GG0-4757855-4757501, LOC667099
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297I02.bB6Ng01-297I02.g
ACCGA092846GA092847
length1,1391,132
definitionB6Ng01-297I02.b B6Ng01-297I02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,485,944 - 63,487,064)(63,308,076 - 63,309,219)
sequence
gaattctcacagcctcaaaactatagaagaactacaggcaaatatggaat
acagatatcagaagaaagtatttttctgtagggaagaaagcaacagctgg
taatccaatactaactggtcagccagtaacatataaaatgagaaacactg
tattcatataaacagagagggagagagagagagagagagagagagagaga
gagagagggagagagagacagagacagacagagacagagagagacagaga
gagacagagacagagagaatttaaaaaggccaaaaaaattgaaaactaca
gtgtgttacatcagataaccagaaggggttcaagaaagaaaaagaaaggg
agaaacaattattatattattatattatatataaaattataatttaaaca
tataaatatatttaaagtctaccattaaagcacaatgatgttaaaattta
ttataagataaaacttaagggtttgcatttatatagttgcatacttaata
tagtatatgattactgcatctaaacttaatttacattaagaagttagata
tgtttcgttctcacccattcttcaaaccttttttttttccatagactgtg
acatgtatatatgtggggcagtagaaagagcacacaagttgatactcaag
gaacaacacacacacacacacacacacacacacacacatttctgttgctt
ctgtttgtttttgtttcgttgtttgatacagcattttactatgcagcttt
agctattctgcaaaacaatatgtaaaccagactggcctcaaatccactgt
gatctactttgcctcagcctgctgagtttctgcattaaatgtatggattt
gccactacacccacttaacacaaagtgttatatatattatgaaatatgac
attaagcattccttataaataagttaaatattcccaatatattctttgta
tcattataacaccctcctttcatattaattaataattttactgatgttgg
agcaaataagatatgcgttttgaaaaattttaacaatattaaccttttga
taattgcacatgtgacaattctcaaagttaaaatacttccctatggaact
taataggaagaattcattactgctttcattacaaataga

gaattctctattaaggaataccaaatgcccgagaaacatataaaaatgtt
caacatccttaatcatcagggaaatgcaaatccaaacaaccgtgaaattc
cgtctctttcttcttgaacaatatctcagtatattttaagtctggctttt
gttctgctacaaatcctcctatcttggactgctggaattatgtttgtata
ttactaccacaactcttgagaaacgtttgactattaaggatagagcacca
taatgacaagagtgaaaatctggatttctatgaatcataattgtagttcc
ctttgctgtacggtaattaataattcctataagatagtacctttaattat
gtaattatttgttttgtggaatatgaactagcttaagaatcttaatcatt
caactgcttctgtgtaatagcatatcctttgggactgagaatacatacaa
tatgtgatagttccatctgtactataaacaaaaagaaaaaaaaatccact
taacttctgtagtttcagcaacacaaggactaccctttttaacctgctga
taaatgatgacatgacactgttttgcaagaaataaatacagctaataaaa
attatatatttgctagggattaaaggatataatcattcaaaataaaacat
agcaccaatagtgtattctaatgaacaaattaaatcttaaacagttatta
catatttcagttttaaatattcagttgttctcaatctttcaatcaagctc
ctatatcagaaattgaatttgcatgactacccaggtatgctggatattta
tatgttaacttgacacaagctaaattattttagaagagggaaccccagtt
gagaaaatgccccaagcaaatgggaactaatggtatattttcttgattgg
tgattgatgtgcatagaaccagctttctgtagatggtaccacccaagact
ggacctcctgggtgttatgagaggtatattgaacaaacataggtgcaaac
agtagcagcactcctcatgactcttgttatcacacctgctcagatttctg
actgctgagtgctggcttgactttcttgtgatgataatggatgtggaaaa
ttaccttaataaatcatttcccaatgttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63485944_63487064
seq2: B6Ng01-297I02.b_48_1186 (reverse)

seq1  TCTATTTGTAAATGAAGCAGTAATGAAACTCTTCCCTTATAAGTTCC-TA  49
      |||||||||||   ||||||||||| || |||| |||  |||||||| ||
seq2  TCTATTTGTAATGAAAGCAGTAATG-AATTCTT-CCTATTAAGTTCCATA  48

seq1  -GGAAATATTTAAACTT--AGAA-TGTCACATGTGC-ATTTTCAAAAGGT  94
       |||| ||||| |||||  |||| |||||||||||| ||| |||||||||
seq2  GGGAAGTATTTTAACTTTGAGAATTGTCACATGTGCAATTATCAAAAGGT  98

seq1  T-ATATTGTT-AAATTTTTCAAAACGCATATCTTA-TTGCT-CAACATCA  140
      | |||||||| |||||||||||||||||||||||| ||||| ||||||||
seq2  TAATATTGTTAAAATTTTTCAAAACGCATATCTTATTTGCTCCAACATCA  148

seq1  GTAAAA-TATT-ATTAATATGAAAG--AGGTGTTATAATGATACAAAGAA  186
      |||||| |||| |||||||||||||   ||||||||||||||||||||||
seq2  GTAAAATTATTAATTAATATGAAAGGAGGGTGTTATAATGATACAAAGAA  198

seq1  TATATT-GGAATATTTAACTTA-TTATAA-GAATGCTT-ATGTCATATTT  232
      |||||| ||||||||||||||| |||||| |||||||| |||||||||||
seq2  TATATTGGGAATATTTAACTTATTTATAAGGAATGCTTAATGTCATATTT  248

seq1  CATAATATATATAACACTTTGTGTTAAGTGGGTGTAGTGGCAAATCCATA  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATATATAACACTTTGTGTTAAGTGGGTGTAGTGGCAAATCCATA  298

seq1  CATTTAATGCAG-AACTCAGCAGGCTGAGGC-AAGTAGATCACAGTGGAT  330
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  CATTTAATGCAGAAACTCAGCAGGCTGAGGCAAAGTAGATCACAGTGGAT  348

seq1  TTGAGGCCAGTCTGGTTTACATATTGTTTTGCAGAATAGCTAAAGCTGCA  380
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCAGTCTGGTTTACATATTGTTTTGCAGAATAGCTAAAGCTGCA  398

seq1  TAGTAAAATGCTGTATCAAACAACGAAACAAAAACAAACAGAAGCAACAG  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAATGCTGTATCAAACAACGAAACAAAAACAAACAGAAGCAACAG  448

seq1  AAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTCCTTGAGTAT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTCCTTGAGTAT  498

seq1  CAACTTGTGTGCTCTTTCTACTGCCCCACATATATACATGTCACAGTCTA  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGTGTGCTCTTTCTACTGCCCCACATATATACATGTCACAGTCTA  548

seq1  TGGAAAAAAAAAAGGTTTGAAGAATGGGTGAGAACGAAACATATCTAACT  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAAAAGGTTTGAAGAATGGGTGAGAACGAAACATATCTAACT  598

seq1  TCTTAATGTAAATTAAGTTTAGATGCAGTAATCATATACTATATTAAGTA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGTAAATTAAGTTTAGATGCAGTAATCATATACTATATTAAGTA  648

seq1  TGCAACTATATAAATGCAAACCCTTAAGTTTTATCTTATAATAAATTTTA  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTATATAAATGCAAACCCTTAAGTTTTATCTTATAATAAATTTTA  698

seq1  ACATCATTGTGCTTTAATGGTAGACTTTAAATATATTTATATGTTTAAAT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATTGTGCTTTAATGGTAGACTTTAAATATATTTATATGTTTAAAT  748

seq1  TATAATTTTATATATAATATAATAATATAATAATTGTTTCTCCCTTTCTT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTTATATATAATATAATAATATAATAATTGTTTCTCCCTTTCTT  798

seq1  TTTCTTTCTTGAACCCCTTCTGGTTATCTGATGTAACACACTGTAGTTTT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTGAACCCCTTCTGGTTATCTGATGTAACACACTGTAGTTTT  848

seq1  CAATTTTTTTGGCCTTTTTAAATTCTCTCTGTCTCTGTCTCTCTCTGTCT  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTTTGGCCTTTTTAAATTCTCTCTGTCTCTGTCTCTCTCTGTCT  898

seq1  CTCTCTGTCTCTGTCTGTCTCTGTCTCTCTCTCCCTCTCTCTCTCTCTCT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTCTGTCTGTCTCTGTCTCTCTCTCCCTCTCTCTCTCTCTCT  948

seq1  CTCTCTCTCTCTCTCTCTCTCCCTCTCTGTTTATATGAATACAGTGTTTC  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCCCTCTCTGTTTATATGAATACAGTGTTTC  998

seq1  TCATTTTATATGTTACTGGCTGACCAGTTAGTATTGGATTACCAGCTGTT  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTATATGTTACTGGCTGACCAGTTAGTATTGGATTACCAGCTGTT  1048

seq1  GCTTTCTTCCCTACAGAAAAATACTTTCTTCTGATATCTGTATTCCATAT  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTCCCTACAGAAAAATACTTTCTTCTGATATCTGTATTCCATAT  1098

seq1  TTGCCTGTAGTTCTTCTATAGTTTTGAGGCTGTGAGAATTC  1121
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTAGTTCTTCTATAGTTTTGAGGCTGTGAGAATTC  1139


seq1: chr6_63308076_63309219
seq2: B6Ng01-297I02.g_66_1197

seq1  GAATTCTCTATTAAGGAATACCAAATGCCCGAGAAACATATAAAAATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTAAGGAATACCAAATGCCCGAGAAACATATAAAAATGTT  50

seq1  CAACATCCTTAATCATCAGGGAAATGCAAATCCAAACAACCGTGAAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCTTAATCATCAGGGAAATGCAAATCCAAACAACCGTGAAATTC  100

seq1  CGTCTCTTTCTTCTTGAACAATATCTCAGTATATTTTAAGTCTGGCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCTTTCTTCTTGAACAATATCTCAGTATATTTTAAGTCTGGCTTTT  150

seq1  GTTCTGCTACAAATCCTCCTATCTTGGACTGCTGGAATTATGTTTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTACAAATCCTCCTATCTTGGACTGCTGGAATTATGTTTGTATA  200

seq1  TTACTACCACAACTCTTGAGAAACGTTTGACTATTAAGGATAGAGCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACCACAACTCTTGAGAAACGTTTGACTATTAAGGATAGAGCACCA  250

seq1  TAATGACAAGAGTGAAAATCTGGATTTCTATGAATCATAATTGTAGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACAAGAGTGAAAATCTGGATTTCTATGAATCATAATTGTAGTTCC  300

seq1  CTTTGCTGTACGGTAATTAATAATTCCTATAAGATAGTACCTTTAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGTACGGTAATTAATAATTCCTATAAGATAGTACCTTTAATTAT  350

seq1  GTAATTATTTGTTTTGTGGAATATGAACTAGCTTAAGAATCTTAATCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATTTGTTTTGTGGAATATGAACTAGCTTAAGAATCTTAATCATT  400

seq1  CAACTGCTTCTGTGTAATAGCATATCCTTTGGGACTGAGAATACATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTTCTGTGTAATAGCATATCCTTTGGGACTGAGAATACATACAA  450

seq1  TATGTGATAGTTCCATCTGTACTATAAACAAAAAGAAAAAAAAATCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGATAGTTCCATCTGTACTATAAACAAAAAGAAAAAAAAATCCACT  500

seq1  TAACTTCTGTAGTTTCAGCAACACAAGGACTACCCTTTTTAACCTGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTGTAGTTTCAGCAACACAAGGACTACCCTTTTTAACCTGCTGA  550

seq1  TAAATGATGACATGACACTGTTTTGCAAGAAATAAATACAGCTAATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATGACATGACACTGTTTTGCAAGAAATAAATACAGCTAATAAAA  600

seq1  ATTATATATTTGCTAGGGATTAAAGGATATAATCATTCAAAATAAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATTTGCTAGGGATTAAAGGATATAATCATTCAAAATAAAACAT  650

seq1  AGCACCAATAGTGTATTCTAATGAACAAATTAAATCTTAAACAGTTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAATAGTGTATTCTAATGAACAAATTAAATCTTAAACAGTTATTA  700

seq1  CATATTTCAGTTTTAAATATTCAGTTGTTCTCAATCTTTCAATCAAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCAGTTTTAAATATTCAGTTGTTCTCAATCTTTCAATCAAGCTC  750

seq1  CTATATCAGAAATTGAATTTGCATGACTACCCAGGTATGCTGGATATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAGAAATTGAATTTGCATGACTACCCAGGTATGCTGGATATTTA  800

seq1  TATGTTAACTTGACACAAGCTAAATTATTTTAGAAGAGGGAACCCCAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAACTTGACACAAGCTAAATTATTTTAGAAGAGGGAACCCCAGTT  850

seq1  GAGAAAATGCCCCAAGCAAAT-GGAACTAATGGTATATTTTCTTGATTGG  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAAAATGCCCCAAGCAAATGGGAACTAATGGTATATTTTCTTGATTGG  900

seq1  TGATTGATGTGCATAGAACCAGCTTTCTGTAGATGGTACCACCCAAGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGATTGATGTGCATAGAACCAGCTTTCTGTAGATGGTACCACCCAAG-AC  949

seq1  TGGACCTCCTGGGTGTTATGAGAAGGTATATTGAACAAACCATAGGGTGC  999
      |||||||||||||||||||||| |||||||||||||||| |||| |||||
seq2  TGGACCTCCTGGGTGTTATGAG-AGGTATATTGAACAAA-CATA-GGTGC  996

seq1  AAACAGTAAGCAGCACTCCTCAATGACTTCTG-TATCAACACCTGCCTCC  1048
      ||||||| ||||||||||||| ||||||  || |||| ||||||||   |
seq2  AAACAGT-AGCAGCACTCCTC-ATGACTCTTGTTATC-ACACCTGC--TC  1041

seq1  AGATTTCTGACCTGCTTGAGTGCCTGCCTGACTTTCTTTGTGATGGATTA  1098
      |||||||||| |||| |||||||  || |||||||| ||||||| ||| |
seq2  AGATTTCTGA-CTGC-TGAGTGCTGGCTTGACTTTC-TTGTGAT-GATAA  1087

seq1  T-GATGTGGAAAATAAACTAAATAAATCATTTCCTCACATGTTATTT  1144
      | |||||||||||| | || |||||||||||||| || |||||||||
seq2  TGGATGTGGAAAATTACCTTAATAAATCATTTCC-CA-ATGTTATTT  1132


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