BAC Information

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BAC

Clone NameB6Ng01-302D13
Chromosome6 (Build37)
Map Location 130,950,800 - 131,116,391
singlet/doubletdoublet
Overlap geneEG625648, LOC667830, EG434094
Upstream geneKlra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628
Downstream geneKlra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302D13.bB6Ng01-302D13.g
ACCGA096330GA096331
length1,1231,106
definitionB6Ng01-302D13.b B6Ng01-302D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,950,800 - 130,951,922)(131,115,585 - 131,116,391)
sequence
gaattctcagattcatcaaagatctacttttagtactacaaataaaattg
gcagtaatatgactctaaaagttataccttttttactagaaatgtacatc
actaagaatacagtggagaaacttgatttgtatatcaaaaatatacagaa
agagaaggacttcagagcctgtattcttatataattttttataataacct
ccaaccaagaatcaagaacctaaacacaaggtgacacaaacggattttaa
aggccagatttatagaatgatgctaaataaaatgcatgttttctgatgca
acaagaacaatgtccacatgagctcaatgagaatatgacagcaatcacaa
gaccagtacaaggaagacaataccctagctttaagaaggagaaagagtta
gaatgtgtcacccaaaggcagaaattatacaaagttcacaatttcttaga
gagggaaaataaattttatactatgtatggacacatgttcgagtcaagaa
atattgctagaacaaatcagactccatgattaaatacatttttggtttct
actttttttcatctgagagaaagagaaagagagagagagagagagagaga
gagagagagagagagagaaagataaaggcagaaaaagagacaaaaagaca
gaaaagtcagagaaaccatgatattgagtttgttcagagagtggagatgg
tctgcaagaagctgaaaaagagaaaaataagaggaaatatatactctaac
acaaataaaaatgaaataaatctataaattactcaaatataaatgatcat
tactgatcattcacatgtagcagaaaaaataagagtaattagaatataat
ctgatactgtgtaaatcattaaaacagtatattttcaaaacatgagtatt
caggtaaaatgaggcagagatcatatagtatccatggtaatacattttct
tttattcattattccgaaagaaattcttaaggaacaatttctattgcaga
gcttttctagccatatgtcagtctagattactctggtttatattcatcac
atgacattaaaactttccttcaattacctgtttttttttcccttcatatc
gttctctattcacaattccatgt
gaattcacacaggagagaaaccttacaaatgtaatgaatgtgggaaatca
tttaaacagaactcacaacttcaagttcactacagaatccacacgggcga
gaaaccttacagatgtagtaactgtgggaaatcttttacacagaactcac
aacttcaagttcactacagaatccacacaggagagaaaccttacaaatgt
aatgaatgtggcaaatcctttacacaatcctacagacttcaagttcacta
cagaatccatacatgatagaagccttaaaatgtaatcaatgaggcaactc
ttttatatgggatacagtgattaaagttcactaccgaatccatacaagag
ggaaaccttaaaaattttttgattgctgcaaatcctttacaaagaactca
gagcttaaagttcaccaaagaatctgtacaggggacaaaccttataaata
taatgaatgctgcaaatcctttacacaacactcagatcataaagctctcc
acagaattcattctggagagaaatcttacaaatgaaatgaaggtggcata
tcattaactaactctccaagtctttattttcactaaagtatctacacaag
agataaaccttacaaatgtggaatgtgtggcaaatcttttacctgttcct
ccattttccaagttcatcaaagaacccacattggacaacaaccttgtatg
tggagtgactttgggaaatacttttccctgtcctaaaattgttaatatca
cacaagaatacaaactagagacaacgttattaatgtaaagaatgtgaaaa
atccttgacatggaaataatcccttcaaacacaacccagcgtgcatcctg
gagagaaatattagaaatatataggccatggcaattattttagcaaaacc
tcaaagcttggagcacatagatctatgcatgaagctaacttaatttgaga
attaattgtctcaatattcataaggaaatgttatttaaaatgagaaaatt
atgggcagaattaattactgttaaagccccaatcatagagattctcatca
aagaaacctaatatgatagtagctaggaatcattttaacgacaaattcaa
cttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130950800_130951922
seq2: B6Ng01-302D13.b_44_1166

seq1  GAATTCTCAAATTCATCAAAAATCTACTTTTAGTACTACAAATAAAATTG  50
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  GAATTCTCAGATTCATCAAAGATCTACTTTTAGTACTACAAATAAAATTG  50

seq1  GCAGTAATATGACTCTAAAAGTTATACCTTTTTTACTAGAAATGTACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAATATGACTCTAAAAGTTATACCTTTTTTACTAGAAATGTACATC  100

seq1  ACTAAGAATACAGTGGAGAAACTTGATTTGTATATCAAAAATATACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAATACAGTGGAGAAACTTGATTTGTATATCAAAAATATACAGAA  150

seq1  AGAGAAGGACTTCAGAGCCTGTATTCTTATATAATTTTTTATAATAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGACTTCAGAGCCTGTATTCTTATATAATTTTTTATAATAACCT  200

seq1  CCAACCAAGAATCAAGAACCTAAACACAAGGTGACACAAACGGATTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAGAATCAAGAACCTAAACACAAGGTGACACAAACGGATTTTAA  250

seq1  AGGCCAGATTTATAGAATGATGCTAAATAAAATGCATGTTTTCTGATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGATTTATAGAATGATGCTAAATAAAATGCATGTTTTCTGATGCA  300

seq1  ACAAGAACAATGTCCACATGAGCTCAATGAGAATATGACAGCAATCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAACAATGTCCACATGAGCTCAATGAGAATATGACAGCAATCACAA  350

seq1  GACCAGTACAAGGAAGACAATACCCTAGCTTTAAGAAGGAGAAAGAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTACAAGGAAGACAATACCCTAGCTTTAAGAAGGAGAAAGAGTTA  400

seq1  GAATGTGTCACCCAAAGGCAGAAATTATACAAAGTTCACAATTTCTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTCACCCAAAGGCAGAAATTATACAAAGTTCACAATTTCTTAGA  450

seq1  GAGGGAAAATAAATTTTATACTATGTATGGACACATGTTCGAGTCAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAATAAATTTTATACTATGTATGGACACATGTTCGAGTCAAGAA  500

seq1  ATATTGCTAGAACAAATCAGACTCCATGATTAAATACATTTTTGGTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTAGAACAAATCAGACTCCATGATTAAATACATTTTTGGTTTCT  550

seq1  ACTTTTTTTCATCTGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTCATCTGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGA  600

seq1  GAGAGAGAGAGAGAGAGAAAGATAAAGGCAGAAAAAGAGACAAAAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAAAGATAAAGGCAGAAAAAGAGACAAAAAGACA  650

seq1  GAAAAGTCAGAGAAACCATGATATTGAGTTTGTTCAGAGAGTGGAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCAGAGAAACCATGATATTGAGTTTGTTCAGAGAGTGGAGATGG  700

seq1  TCTGCAAGAAGCTGAAAAAGAGAAAAATAAGAGGAAATATATACTCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGAAGCTGAAAAAGAGAAAAATAAGAGGAAATATATACTCTAAC  750

seq1  ACAAATAAAAATGAAATAAATCTATAAATTACTCAAATATAAATGATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAAAATGAAATAAATCTATAAATTACTCAAATATAAATGATCAT  800

seq1  TACTGATCATTCACATGTAGCAGAAAAAATAAGAGTAATTAGAATATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATCATTCACATGTAGCAGAAAAAATAAGAGTAATTAGAATATAAT  850

seq1  CTGATACTTTGTAAAATCATTAAAACAGTATA-TTTCAAAACATGAGTAT  899
      |||||||| ||| ||||||||||||||||||| |||||||||||||||||
seq2  CTGATACTGTGT-AAATCATTAAAACAGTATATTTTCAAAACATGAGTAT  899

seq1  TCAGGTAAAATGAGGCAGAGATCATATAGTATCCATGGTAATACATTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAAAATGAGGCAGAGATCATATAGTATCCATGGTAATACATTTTC  949

seq1  TTTTATTCATTATTCCGAAAGAAATTCTT-AGGAACAATTTCTATTGCAG  998
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTATTCATTATTCCGAAAGAAATTCTTAAGGAACAATTTCTATTGCAG  999

seq1  AGCTTTTCTAGCCATATGTCAGGTCTAGATTACTCTTGGTTTTATATTCA  1048
      ||||||||||||||||||||| ||||||||||||||  | ||||||||||
seq2  AGCTTTTCTAGCCATATGTCA-GTCTAGATTACTCT--GGTTTATATTCA  1046

seq1  TCACATGACA-TAAAACTTCCTTTCAAATTACCTGTTTTTTTTTCCTTCC  1097
      |||||||||| |||||||| | ||| |||||||||||||||||||| | |
seq2  TCACATGACATTAAAACTTTCCTTC-AATTACCTGTTTTTTTTTCCCTTC  1095

seq1  ATATC-TTCTCTATCAACAA-TCCATGT  1123
      ||||| ||||||||  |||| |||||||
seq2  ATATCGTTCTCTATTCACAATTCCATGT  1123

seq1: chr6_131115585_131116391
seq2: B6Ng01-302D13.g_360_1170 (reverse)

seq1  TATAAGTTGAATTTGGTGGTAAAATGATTCC-AACTACTATCAATATAGG  49
      |||||||||||||||  | |||||||||||| | |||||||||   ||||
seq2  TATAAGTTGAATTTGTCGTTAAAATGATTCCTAGCTACTATCATATTAGG  50

seq1  GT--TTTTATGAGAATTCTCTATTAATGGGGTTTTAACATTATTTAAATT  97
       |  ||| ||||||| ||||||| | ||||| ||||||| || || ||||
seq2  TTTCTTTGATGAGAA-TCTCTATGATTGGGGCTTTAACAGTAATT-AATT  98

seq1  CTGCCAATAATTTTCTCATTTTAAATAACATTTCCTTATGAATATTGGGA  147
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGCCCATAATTTTCTCATTTTAAATAACATTTCCTTATGAATATTGAGA  148

seq1  CAA-TAATTTTC-AATTAAGTTAGCTTCATGCATAGATCTATGTGCTCCA  195
      ||| ||||| || |||||||||||||||||||||||||||||||||||||
seq2  CAATTAATTCTCAAATTAAGTTAGCTTCATGCATAGATCTATGTGCTCCA  198

seq1  AGCTTTGAGGTTTTGCTAAAAT-ATTGCCATGGCCTATATATTTCTAATA  244
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGCTTTGAGGTTTTGCTAAAATAATTGCCATGGCCTATATATTTCTAATA  248

seq1  TTTCTCTCCAGGATGCACGCTGGGTTGTGTTTGAAGGGATTATTTCCATG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCCAGGATGCACGCTGGGTTGTGTTTGAAGGGATTATTTCCATG  298

seq1  TCAAGGATTTTTCACATTCTTTACATTAATAACGTTGTCTCTAGTTTGTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATTTTTCACATTCTTTACATTAATAACGTTGTCTCTAGTTTGTA  348

seq1  TTCTTGTGTGATATTAACAATTTTAGGACAGGGAAAAGTATTTCCCAAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTGATATTAACAATTTTAGGACAGGGAAAAGTATTTCCCAAAG  398

seq1  TCACTCCACATACAAGGTTGTTGTCCAATGTGGGTTCTTTGATGAACTTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCACATACAAGGTTGTTGTCCAATGTGGGTTCTTTGATGAACTTG  448

seq1  GAAAATGGAGGAACAGGTAAAAGATTTGCCACACATTCCACATTTGTAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGGAGGAACAGGTAAAAGATTTGCCACACATTCCACATTTGTAAG  498

seq1  GTTTATCTCTTGTGTAGATACTTTAGTGAAAATAAAGACTTGGAGAGTTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTCTTGTGTAGATACTTTAGTGAAAATAAAGACTTGGAGAGTTA  548

seq1  GTTAATGATATGCCACCTTCATTTCATTTGTAAGATTTCTCTCCAGAATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGATATGCCACCTTCATTTCATTTGTAAGATTTCTCTCCAGAATG  598

seq1  AATTCTGTGGAGAGCTTTATGATCTGAGTGTTGTGTAAAGGATTTGCAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTGGAGAGCTTTATGATCTGAGTGTTGTGTAAAGGATTTGCAGC  648

seq1  ATTCATTATATTTATAAGGTTTGTCCCCTGTACAGATTCTTTGGTGAACT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTATATTTATAAGGTTTGTCCCCTGTACAGATTCTTTGGTGAACT  698

seq1  TTAAGCTCTGAGTTCTTTGTAAAGGATTTGCAGCAATCAAAAAATTTTTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCTGAGTTCTTTGTAAAGGATTTGCAGCAATCAAAAAATTTTTA  748

seq1  AGGTTTCCCTCTTGTATGGATTCGGTAGTGAACTTTAATCACTGTATCCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCCTCTTGTATGGATTCGGTAGTGAACTTTAATCACTGTATCCC  798

seq1  ATATAAAAGAGTT  807
      |||||||||||||
seq2  ATATAAAAGAGTT  811