BAC Information

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BAC

Clone NameB6Ng01-302J13
Chromosome6 (Build37)
Map Location 12,143,189 - 12,144,285
singlet/doubletsinglet
Overlap genenone
Upstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879
Downstream geneThsd7a, LOC667735, LOC384350, Tmem106b, Gm467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302J13.b
ACCGA096605
length1,092
definitionB6Ng01-302J13.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactaatctccagcatcatatctgcctttatgctgtcacact
tcccaccatgatgataatggactaaacctctaaactgtaagccagcccca
gttaaatgttttcctttaacattgttgtggctatggtgtcttttcacagc
aataaaacagcgattaagacagtatcatattcacatttttatataaagtg
ttttggttgaagctcacactcatctccttgctcctctcctctgccatccc
cagtccgactttttacttttccttacaagtgttctcttcctttcactgct
cttacctcttcttcttgctgtttctcagtcttcattccagatgtttacct
gtgcttatacccatttatgtacatatatatagatgttacaaaccaggcac
tgtgtatatgagaaaacatgtatttcttgactttttgagttttggtctct
tctattgatattgtacttcccagctacatctattttcctaatctattgtt
cttcacaactgtgtaagattccactatatacatggataacattttcatta
tctattcatcttttttaaattttaaagttttattttttgtttttaaataa
tgtatattaatatgtgagttttacatgtacctgtgcatgtgttaccttca
taggccagaagaggccttcagattcttaatagagggagttacagcctgac
ttagacactgagaactgaactctggtacctacaaaagcaatataccctct
taacctctgaactgtctctccagcccattattcatctgttaaggagcacg
catgcttttggggagcacatccaaccagattatctggaattatgccaggc
ctcactatggtgaaaattctcaataatttctccatttagtttgtttttaa
tttatgtttcaatatttgtttttcttttttatcttgggtcttacagcttt
agcgttaggtatttcctggattatttaaagctcctttgtaaatagggtta
ttgaagttatagtttaagaagctatcactatatatagaaaactatcattt
gtacttgatctgtctacataaccaagccttatttttactact
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_12143189_12144285
seq2: B6Ng01-302J13.b_47_1138

seq1  GAATTCTCAACTAATCTCCAGCATCATATCTGCCTTTATGCTGTCACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTAATCTCCAGCATCATATCTGCCTTTATGCTGTCACACT  50

seq1  TCCCACCATGATGATAATGGACTAAACCTCTAAACTGTAAGCCAGCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCATGATGATAATGGACTAAACCTCTAAACTGTAAGCCAGCCCCA  100

seq1  GTTAAATGTTTTCCTTTAACATTGTTGTGGCTATGGTGTCTTTTCACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGTTTTCCTTTAACATTGTTGTGGCTATGGTGTCTTTTCACAGC  150

seq1  AATAAAACAGCGATTAAGACAGTATCATATTCACATTTTTATATAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACAGCGATTAAGACAGTATCATATTCACATTTTTATATAAAGTG  200

seq1  TTTTGGTTGAAGCTCACACTCATCTCCTTGCTCCTCTCCTCTGCCATCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTGAAGCTCACACTCATCTCCTTGCTCCTCTCCTCTGCCATCCC  250

seq1  CAGTCCGACTTTTTACTTTTCCTTACAAGTGTTCTCTTCCTTTCACTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCGACTTTTTACTTTTCCTTACAAGTGTTCTCTTCCTTTCACTGCT  300

seq1  CTTACCTCTTCTTCTTGCTGTTTCTCAGTCTTCATTCCAGATGTTTACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTCTTCTTCTTGCTGTTTCTCAGTCTTCATTCCAGATGTTTACCT  350

seq1  GTGCTTATACCCATTTATGTACATATATATAGATGTTACAAACCAGGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATACCCATTTATGTACATATATATAGATGTTACAAACCAGGCAC  400

seq1  TGTGTATATGAGAAAACATGTATTTCTTGACTTTTTGAGTTTTGGTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATGAGAAAACATGTATTTCTTGACTTTTTGAGTTTTGGTCTCT  450

seq1  TCTATTGATATTGTACTTCCCAGCTACATCTATTTTCCTAATCTATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGATATTGTACTTCCCAGCTACATCTATTTTCCTAATCTATTGTT  500

seq1  CTTCACAACTGTGTAAGATTCCACTATATACATGGATAACATTTTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAACTGTGTAAGATTCCACTATATACATGGATAACATTTTCATTA  550

seq1  TCTATTCATCTTTTTTAAATTTTAAAGTTTTATTTTTTGTTTTTAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCATCTTTTTTAAATTTTAAAGTTTTATTTTTTGTTTTTAAATAA  600

seq1  TGTATATTAATATGTGAGTTTTACATGTACCTGTGCATGTGTTACCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTAATATGTGAGTTTTACATGTACCTGTGCATGTGTTACCTTCA  650

seq1  TAGGCCAGAAGAGGCCTTCAGATTCTTAATAGAGGGAGTTACAGCCTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCAGAAGAGGCCTTCAGATTCTTAATAGAGGGAGTTACAGCCTGAC  700

seq1  TTAGACACTGAGAACTGAACTCTGGTACCTACAAAAGCAATATACCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACACTGAGAACTGAACTCTGGTACCTACAAAAGCAATATACCCTCT  750

seq1  TAACCTCTGAACTGTCTCTCCAGCCCATTATTCATCTGTTAAGGAGCACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCTGAACTGTCTCTCCAGCCCATTATTCATCTGTTAAGGAGCACG  800

seq1  CATGCTTTTGGGGAGCACATCCAACCAGATTATCTGGAATTATGCCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTGGGGAGCACATCCAACCAGATTATCTGGAATTATGCCAGGC  850

seq1  CTCACTATGGTGAAAATTCTCAATAATTTCTCCATTTAGTTTGTTTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTATGGTGAAAATTCTCAATAATTTCTCCATTTAGTTTGTTTTTAA  900

seq1  TTTATGTTTCAATATTTGTTTTTCTTTTTTATCTTGGGTCTTACAGCTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTCAATATTTGTTTTTCTTTTTTATCTTGGGTCTTACAGCTTT  950

seq1  AGCGTTAGGTATTTCCTGGATTATTTAAAGCTCCTTTGTAAATAGGGTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTAGGTATTTCCTGGATTATTTAAAGCTCCTTTGTAAATAGGGTTA  1000

seq1  TTGAAGTTATAGTTTAAAGAAGCTATCACTAATATATAAGAAAACTATTC  1050
      ||||||||||||||| |||||||||||||| |||||| ||||||||| ||
seq2  TTGAAGTTATAGTTT-AAGAAGCTATCACT-ATATAT-AGAAAACTA-TC  1046

seq1  ATTTTGTACTTGATCTGTCTACATTACCAAAGCCTTA-TTTTACTACT  1097
      | |||||||||||||||||||||| ||| |||||||| ||||||||||
seq2  A-TTTGTACTTGATCTGTCTACATAACC-AAGCCTTATTTTTACTACT  1092


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