BAC Information

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BAC

Clone NameB6Ng01-303F14
Chromosome6 (Build37)
Map Location 18,158,765 - 18,159,087
singlet/doubletsinglet
Overlap geneCftr
Upstream geneCav2, Cav1, Met, Capza2, St7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751
Downstream geneCttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303F14.bB6Ng01-303F14.g
ACCGA097171GA097172
length1,0711,158
definitionB6Ng01-303F14.b B6Ng01-303F14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactctctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagccaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacagactgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggtg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctaccttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaatcc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccaatggaagaaagtagcctcattttcatttctgatatag
ttatctcaaattatataggatgcccctatatttttttcagaacaatacta
gttagtgtagtttaagtttagtttagtttagttaagtttagtttagttag
tttaagctaaataaagggaat
gaattcttctgtacacaactttaataataaacaatgtaggcaaagttggt
ctgtagaaggaagcagtcatgctttaaagttgggtctaattgaggagcag
acaaaatgatgaactagacaaagatttcatgcaatgagttaaaaatagaa
tacatccaactcttttgagaagacataagaaaaagggtgattaaattaga
aaggaagagagaggaaggaaatgaaatttagttcagtttgtagaattcag
aggcattcttttcaagcagagcaattcagtcagaagccaagagaaaacca
tgtaaaccagtgatcttggagtggagtttgagccagaacagctgagttga
accagcctgccagagttctaaatgagctagaaagggtgagtttttttcag
cagaaaacctccaagctaactgcatctggcgaataaaatatataattata
tctgacattttacatgatcaaagaaggagagagcccaccaatattgcaga
aagcaatggataggagacatctgacaaaaagctgcagaaaaataattcac
ctgggattgtctccagatgaaacttcaatttttggattctactggatacc
tagagagactcaggagattccaaagcaaccagagcctcaaccacagagta
aagaatgacacagcatcttctaagaaacatcatacaataagccaacccca
aagacaattttaattatatggttagacttttgtttcattggaaaattgga
aactttatttcagcttcccaaagatgagctataggagttgaggggaaagc
tgaatcacagtatttattgcaattgtgaccaccagaacaaaaaccctccc
tacttttacttgcaatctttatatattttctctccaaagaagttaaaata
atatctatacaacaagaaaaaaaagtttcaagaaggttgaaaataactgt
acaacacaaaatagctgtagaaaaaagttatctgtgatagttcaaaggct
tgagagaaaaaatcattaagaagaataacagaaattcctatttcaactct
atggtatatataaaattgaggatcagatagacagccaactgacttatatt
ggcatcgtatgcagttaaggtatactatattcattctataatggggaacc
aaaactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18158765_18159087
seq2: B6Ng01-303F14.b_878_1117

seq1  AATGGAATAGAATTGAAGACACAGATATGAACCCACACATCTATGGTCAC  50
      |||||||||||||||||||| |||| ||||||||||||| ||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  CTGATCTTTGACAAAGGAGCTAAAACCATCCAGTGGAAAAAAAGA-CAGC  99
       ||||||| ||||| ||||||||||||||||| ||||| |||  | |  |
seq2  TTGATCTTCGACAAGGGAGCTAAAACCATCCAATGGAAGAAAGTAGCCTC  100

seq1  ATTTTCACCAAATGGTGCTGGTTCAACTGGCAGTTATC---ATGTAGA-A  145
      |||||||        | ||| |         |||||||   |  || | |
seq2  ATTTTCA-------TTTCTGAT-------ATAGTTATCTCAAATTATATA  136

seq1  GAATGCCAATCGATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCCAAA  195
      | |||||   | ||  ||| || ||     | ||||  ||  |||   | 
seq2  GGATGCC--CCTAT--ATTTTTTTC----AGAACAATACT--AGT--TAG  174

seq1  TGGACCAAGGATCACCACATAAAAGCAGATAAACTGAAACTAATAGAAAA  245
      || |     | |       |||    || | |  |        |||  ||
seq2  TGTA-----GTT-------TAAGTTTAGTTTAGTT--------TAGTTAA  204

seq1  GAAAGTGAGGAAGAGCCTTGAGCACATGGGCACAGGAGAAAATTCAGGGT  295
      |                || ||                    || | | |
seq2  G----------------TTTAG--------------------TTTA-GTT  217

seq1  AATCTAAGGGAAGCTAAATAAAGGGAAT  323
      | | |     ||||||||||||||||||
seq2  AGTTT-----AAGCTAAATAAAGGGAAT  240