BAC Information

Click to search

BAC

Clone NameB6Ng01-304F20
Chromosome6 (Build37)
Map Location 64,539,811 - 64,540,815
singlet/doubletsinglet
Overlap geneGrid2
Upstream genenone
Downstream geneAtoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik, 9030611K07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304F20.bB6Ng01-304F20.g
ACCGA097941GA097942
length1,007492
definitionB6Ng01-304F20.b B6Ng01-304F20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaagggtgctgtacttgaggccgaatgaaagagaagatgtcta
acacaaagagaacacaacaaggacagcattgcgggggcggggagtgtgtg
tcattgatattgatatcatatcaaaaagcagataaagaaaaaaagattca
ggaatatgtccatcaattttaggataagaaggaaagcaatatgtattagg
atgtattttaaaatgatgaatttcaaagcttgtaagtgtagtagaacaaa
gtaccaaagagtcagcagaaactctggaaggactgaaccattctgcatct
gagagtctttgagcgggactgcaggtaggaagtaagcttttaatgagtag
gaggaggtgggaggcttcttcaagggagattaaaggcatgggaactccat
aggaataaaacagaaggctctgtatgcaagagcatctgcactaaagatga
tggtggggtacttggccaggacctagggcaggtgagagagataagttaag
agcagagtgaatgagaggtatttctcaggaagcgccatcttctgggaggg
ctgggcaagccaaggaccctggaggttgttaagtccttttctgctattca
ttttttaacagtgtcgccccccacccccctcgtgccacactgttctgtct
ctctcccaggcctttctgctcgctcccggctggatttgcaactttgttct
ttgttctcccatctacttcctgcttgatctgtatttcttggattctcaga
gatggataattttttaaggcagaattatagtaaattttattaaacaccct
tatttaggcagaagatttcctctgtagtagataggttttgttgttgttta
taggtttctatggtacaaagtgtgtgagacattctttttattgtttccta
cattataatttgtggccttgaataatggcaaacaataaaacctctgcttg
ttttaaagagtcctaatagtattaatgatgatttacctctgcaattttga
tttttga

tttgcttgaaaatctttttccagcttttactatgaggtaatgtctacctt
tgatgttgaggtgtttcttgtgtgtggcagaaggatggatcctgtattca
catccattctattagcctgtgtctttttatttgggaattgactctgaaag
actccgaaaggagccccttgatcaggcctcaggacaatagcagacaccca
agaactcatgatagaccaagcttgttgcaaaccacatgaggccttattcg
tggaaagccagagctctgggaatgagtcatatcctacgcaggggtagagg
agttgacctcgaggggaaagagttcccagattttataggccctcaggggg
gaaaggagaagggggagagtaggggatttcctgatctaaacaatgtctat
tctcaagaaatgggtatgggaggggtacaaggaaagagtctaatgaaggt
gcagcaatggggcacacacctgggtcagaacattggttgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64539811_64540815
seq2: B6Ng01-304F20.b_50_1056 (reverse)

seq1  TCAAAAATCAAAA-TGCAGAGGTAAATCATTATTAATACTA-TATGACTC  48
      ||||||||||||| |||||||||||||||| |||||||||| || |||||
seq2  TCAAAAATCAAAATTGCAGAGGTAAATCATCATTAATACTATTAGGACTC  50

seq1  TTTGAAACAAGCAGAGGTCTAATTGTTTGCCATTATTCAAGGCCAC-AAT  97
      ||| |||||||||||||| | ||||||||||||||||||||||||| |||
seq2  TTTAAAACAAGCAGAGGTTTTATTGTTTGCCATTATTCAAGGCCACAAAT  100

seq1  TATATTGTATGGAAACAAT-AAAAGAATGTCTCACACACTTTGTACCATA  146
      |||| |||| ||||||||| ||||||||||||||||||||||||||||||
seq2  TATAATGTA-GGAAACAATAAAAAGAATGTCTCACACACTTTGTACCATA  149

seq1  GAAACCTATAAACAACAACAAAACCTATCTACTACAGAGGAAATCTTCTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTATAAACAACAACAAAACCTATCTACTACAGAGGAAATCTTCTG  199

seq1  CCTAAATAAGGGTGTTTAATAAAATTTACTATAATTCTGCCTTTAAAAAA  246
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTAAATAAGGGTGTTTAATAAAATTTACTATAATTCTGCC-TTAAAAAA  248

seq1  TTATCCATCTCTGAGAATCCAAGAAATACAGATCAAGCAGGAAGTAGATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCATCTCTGAGAATCCAAGAAATACAGATCAAGCAGGAAGTAGATG  298

seq1  GGAGAACAAAGAACAAAGTTGCAAATCCAGCCGGGAGCGAGCAGAAAGGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACAAAGAACAAAGTTGCAAATCCAGCCGGGAGCGAGCAGAAAGGC  348

seq1  CTGGGAGAGAGACAGAACAGTGTGGCACGAGGGGGGTGGGGGGCGACACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGAGAGACAGAACAGTGTGGCACGAGGGGGGTGGGGGGCGACACT  398

seq1  GTTAAAAAATGAATAGCAGAAAAGGACTTAACAACCTCCAGGGTCCTTGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAATGAATAGCAGAAAAGGACTTAACAACCTCCAGGGTCCTTGG  448

seq1  CTTGCCCAGCCCTCCCAGAAGATGGCGCTTCCTGAGAAATACCTCTCATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCAGCCCTCCCAGAAGATGGCGCTTCCTGAGAAATACCTCTCATT  498

seq1  CACTCTGCTCTTAACTTATCTCTCTCACCTGCCCTAGGTCCTGGCCAAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGCTCTTAACTTATCTCTCTCACCTGCCCTAGGTCCTGGCCAAGT  548

seq1  ACCCCACCATCATCTTTAGTGCAGATGCTCTTGCATACAGAGCCTTCTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCATCATCTTTAGTGCAGATGCTCTTGCATACAGAGCCTTCTGT  598

seq1  TTTATTCCTATGGAGTTCCCATGCCTTTAATCTCCCTTGAAGAAGCCTCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCTATGGAGTTCCCATGCCTTTAATCTCCCTTGAAGAAGCCTCC  648

seq1  CACCTCCTCCTACTCATTAAAAGCTTACTTCCTACCTGCAGTCCCGCTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTCCTACTCATTAAAAGCTTACTTCCTACCTGCAGTCCCGCTCA  698

seq1  AAGACTCTCAGATGCAGAATGGTTCAGTCCTTCCAGAGTTTCTGCTGACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTCAGATGCAGAATGGTTCAGTCCTTCCAGAGTTTCTGCTGACT  748

seq1  CTTTGGTACTTTGTTCTACTACACTTACAAGCTTTGAAATTCATCATTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTACTTTGTTCTACTACACTTACAAGCTTTGAAATTCATCATTTT  798

seq1  AAAATACATCCTAATACATATTGCTTTCCTTCTTATCCTAAAATTGATGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATCCTAATACATATTGCTTTCCTTCTTATCCTAAAATTGATGG  848

seq1  ACATATTCCTGAATCTTTTTTTCTTTATCTGCTTTTTGATATGATATCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCCTGAATCTTTTTTTCTTTATCTGCTTTTTGATATGATATCAA  898

seq1  TATCAATGACACACACTCCCCGCCCCCGCAATGCTGTCCTTGTTGTGTTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGACACACACTCCCCGCCCCCGCAATGCTGTCCTTGTTGTGTTC  948

seq1  TCTTTGTGTTAGACATCTTCTCTTTCATTCGGCCTCAAGTACAGCACCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTTAGACATCTTCTCTTTCATTCGGCCTCAAGTACAGCACCCT  998

seq1  TGTGAATTC  1005
      |||||||||
seq2  TGTGAATTC  1007


| Home | SequenceCutter | Blast | Download |