BAC Information

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BAC

Clone NameB6Ng01-304O10
Chromosome6 (Build37)
Map Location 46,646,796 - 46,647,922
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneRbpsuh-rs3
Downstream geneLOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1, Ezh2, Rn4.5s
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304O10.bB6Ng01-304O10.g
ACCGA098328GA098329
length1,2071,111
definitionB6Ng01-304O10.b B6Ng01-304O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcattcttaatcatcagagaaatgcaaatcaaaagaaccctgagat
tccacttaacagcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacgctccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggatgttcctta
gaattttggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaaggaggacacatgctccactat
gtttatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaatttatggtacatttacacaatg
gagtattactctgctattaaaaagaatgaatttgtgaaatttctaggcaa
atggttgaacctggagggtatcatcctgcgtgaggtaacacaaccacaaa
agaactcaaatgatatgtactcactgataagtgaatattagcccagaaac
ttagtatacccgagatatgagacaatttgtaaaacacatgaaactgaaga
agaacaaagaccaaagtgtggacactttgccccttcttagaattggaaac
aatcacccatggaaggagttacagagacacagtttggagctgagacaaaa
ggatggaccatctagagaccgccatatccagggattcatctcataattaa
cctccgaacgatgacaccattgcatacactagcaagattttgctgaaagg
accctgatatagctgtctcttgtgagactaggccacggcctagcaaacac
ataagtggatgctcacagtcagctattgggatgggtcacacggcccccaa
tggagaagctagagaaagtaaccgaggaactaaagagatctgcaacctgt
aggtgcaacaacattatgaactaaccagtaccccgagctcttgactctag
ctgcattatgtatcaaagatggcctagtcagcatcactgggaagagagcc
caatggacatgcaacttaaatgctcagtacagggatggcagggccaattg
atgggtgggtatagggagtggcctctccgtctcgtaacgtgctaggcaga
tcgatgc
gaattcagtggccccatgtctatcattatgtttcacttggttctagggtg
ccattttgtttgtaggtaacatggctttgggtaaaagctttttagtgtct
gggaaagaaaggaattcagcttgaagtgcatcatggaattttaatcatag
aaggatagcaaggaaggggcaaacctcattagtggtccaataaggaaaca
tatgaggggtctcatgtaaatgggactcctcaaactctgcagtaaactga
acagcactgggaaaaggccacgttcaaaatgcaagccctgtgcatgcatg
catcctctcaaagttactcttccaaccagccaccattaatgccatcaatc
tgcctcattgtgacctacctttcctgacttactaataacttctgtaccca
catcttcatccccattgcctttcatgtaggttttagttacactgttgctt
tgggccttaacaggtttgattgtctttttaaattttttattgaaacataa
tgtttatgtaagactccaactgtaatcatgtggttaggcaagtcttgaca
agagcatacatctgtgtaccccagtcctctgccatgataatggaacactc
ctgtcaacctagaaaattctctaagaccctttcctatgctatgtctgcct
tgaaatcagagacaattactgatctgactagactaattttacccatttga
gaatttcataacagtacagaaaatatttctaaagattggctttccactct
atgaacatttctgaccattgttctttttcttatattcaacaagatgcata
gacctaaaaatttggatgttctgtttgatttttaaaactaaaattgctat
gaacagtttctcaaatcctttctgtggatcaacattttttctaaaatttc
acctaggagtggcattaccaggtcatgtggttaaattttaactaacctta
atttttgttgatgagtttcagtttatacactctagtgggttgtgtaccag
tatttgttttattctgcatgcaggatgactttagtatggttttgctttgt
tttgttttgtttgttttgttttggtttgaatgtctatgagtcacttgtct
ttcaacttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_46646796_46647922
seq2: B6Ng01-304O10.g_70_1180

seq1  GAATTCAGTGGCCCCATGTCTATCATTATGTTTCACTTGGTTCTAGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGCCCCATGTCTATCATTATGTTTCACTTGGTTCTAGGGTG  50

seq1  CCATTTTGTTTGTAGGTAACATGGCTTTGGGTAAAAGCTTTTTAGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGTTTGTAGGTAACATGGCTTTGGGTAAAAGCTTTTTAGTGTCT  100

seq1  GGGAAAGAAAGGAATTCAGCTTGAAGTGCATCATGGAATTTTAATCATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAAAGGAATTCAGCTTGAAGTGCATCATGGAATTTTAATCATAG  150

seq1  AAGGATAGCAAGGAAGGGGCAAACCTCATTAGTGGTCCAATAAGGAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGCAAGGAAGGGGCAAACCTCATTAGTGGTCCAATAAGGAAACA  200

seq1  TATGAGGGGTCTCATGTAAATGGGACTCCTCAAACTCTGCAGTAAACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGGGTCTCATGTAAATGGGACTCCTCAAACTCTGCAGTAAACTGA  250

seq1  ACAGCACTGGGAAAAGGCCACGTTCAAAATGCAAGCCCTGTGCATGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTGGGAAAAGGCCACGTTCAAAATGCAAGCCCTGTGCATGCATG  300

seq1  CATCCTCTCAAAGTTACTCTTCCAACCAGCCACCATTAATGCCATCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTCAAAGTTACTCTTCCAACCAGCCACCATTAATGCCATCAATC  350

seq1  TGCCTCATTGTGACCTACCTTTCCTGACTTACTAATAACTTCTGTACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCATTGTGACCTACCTTTCCTGACTTACTAATAACTTCTGTACCCA  400

seq1  CATCTTCATCCCCATTGCCTTTCATGTAGGTTTTAGTTACACTGTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCATCCCCATTGCCTTTCATGTAGGTTTTAGTTACACTGTTGCTT  450

seq1  TGGGCCTTAACAGGTTTGATTGTCTTTTTAAATTTTTTATTGAAACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTTAACAGGTTTGATTGTCTTTTTAAATTTTTTATTGAAACATAA  500

seq1  TGTTTATGTAAGACTCCAACTGTAATCATGTGGTTAGGCAAGTCTTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGTAAGACTCCAACTGTAATCATGTGGTTAGGCAAGTCTTGACA  550

seq1  AGAGCATACATCTGTGTACCCCAGTCCTCTGCCATGATAATGGAACACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATACATCTGTGTACCCCAGTCCTCTGCCATGATAATGGAACACTC  600

seq1  CTGTCAACCTAGAAAATTCTCTAAGACCCTTTCCTATGCTATGTCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAACCTAGAAAATTCTCTAAGACCCTTTCCTATGCTATGTCTGCCT  650

seq1  TGAAATCAGAGACAATTACTGATCTGACTAGACTAATTTTACCCATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAGAGACAATTACTGATCTGACTAGACTAATTTTACCCATTTGA  700

seq1  GAATTTCATAACAGTACAGAAAATATTTCTAAAGATTGGCTTTCCACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATAACAGTACAGAAAATATTTCTAAAGATTGGCTTTCCACTCT  750

seq1  ATGAACATTTCTGACCATTGTTCTTTTTCTTATATTCAACAAGATGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATTTCTGACCATTGTTCTTTTTCTTATATTCAACAAGATGCATA  800

seq1  GACCTAAAAATTTGGATGTTCTGTTTGATTTTTAAAACTAAAATTGCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAAAATTTGGATGTTCTGTTTGATTTTTAAAACTAAAATTGCTAT  850

seq1  GAACAGTTTCTCAAATCCTTTCTGTGGATCAACATTTTTTCTAAAATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTTTCTCAAATCCTTTCTGTGGATCAACATTTTTTCTAAAATTTC  900

seq1  ACCTAGGAGTGGCATTACCAGGTCATGTGGTTAAATTTTAACTAACCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACCTAGGAGTGGCATTACCAGGTCATGTGGTTAAATTTTAACTAACCTT-  949

seq1  AATTTTTGTTGATGAGTTTCAGTTTTATACACTCTAGT-GGTTGTGTACC  999
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  AATTTTTGTTGATGAGTTTCAG-TTTATACACTCTAGTGGGTTGTGTACC  998

seq1  AGTATTTGTTTTATTCTGCATTGCCAGGATGACTTTAGTATGGTTTTTGC  1049
      |||||||||||||||||||||   ||||||||||||||||||| ||||||
seq2  AGTATTTGTTTTATTCTGCAT--GCAGGATGACTTTAGTATGG-TTTTGC  1045

seq1  TTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTGAATGTCTATT  1099
      |||   ||||||||   | ||||||||   ||||| ||||||||||||| 
seq2  TTT--GTTTTGTTT---TGTTTGTTTT--GTTTTGGTTTGAATGTCTAT-  1087

seq1  GAAGTCACTTGTCTTTTCAAAACTTAGT  1127
        ||||||||||||||    ||||||||
seq2  -GAGTCACTTGTCTTT---CAACTTAGT  1111