BAC Information

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BAC

Clone NameB6Ng01-304P12
Chromosome6 (Build37)
Map Location 126,432,774 - 126,645,170
singlet/doubletdoublet
Overlap geneKcna5, Kcna1
Upstream geneCd9, Vwf, Tmem16b, Ntf3, LOC100043565, LOC667427, LOC100043567
Downstream geneKcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642, LOC100043578, EG640703, LOC100043848, Parp11, Efcab4b, Prmt8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304P12.bB6Ng01-304P12.g
ACCGA098380GA098381
length96987
definitionB6Ng01-304P12.b B6Ng01-304P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,432,774 - 126,432,869)(126,644,190 - 126,645,170)
sequence
taccctagactgtgatctcttagacctattctgctggtctggctcctgag
gggggagagagagagagagagagatagagagagagagagagataga
gaattcatttgcagcaaccttctgcagatccaggggttgatctgactcgg
gcaaccaggaaacgaaggaagaactgacatgtccacagagaagcggggtt
caggtgggctgggctcttggatggagaagctacagcaccccagaagttca
gcatgtttatcacatacagataaacagggaggcggatcttatggtgtctg
gtatacaactgagctaggatggaggtctagttcatcttagaaggagtagt
ccctgtcagagagtgttcttcaggccatgatcatccagaggagaaagctg
tggcagccattctctgcaacactggcaatattggtatttttcctggaggg
cagctttgccatcccacggaggttcatccagggaaggctttgccactcac
atggggccgaggcatgtcaaatggtacatatttaccctgcacttcccttt
cgtaactcttagatgtctgagatggatctttacccttagtgtagaagcag
ttccccacagggttggacactggactgtcagaatgacaaagagaaaggtc
acagtagccatcatgcccaacaaaaacaaaaggaatgctttaataaggta
aagggcccagagccttgaagcttcctagtaagagaaaccaacccgatcat
aagctgtttgctttttctgtgatgtgcctatgtaattgggtcacatcctc
actatcatgattgagggcccatgtacccaggaggtggctcccttggtttt
ccaatttatcctgtccaaatcacacaactgtacccaccccgaagggttgg
gatgggaccccttagaactctaggatggttagagcagctcccacccccca
aagtgaagggagttatttagtgtaaacagatagagcaggattgatccagc
cactggtttaaaaacaacagcccagcaaggggctgacctgtcttacctac
ttgggatacaattaccaagcaccagccagggggttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_126432774_126432869
seq2: B6Ng01-304P12.b_51_146

seq1  TACCCTAGACTGTGATCTCTTAGACCTATTCTGCTGGTCTGGCTCCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTAGACTGTGATCTCTTAGACCTATTCTGCTGGTCTGGCTCCTGAG  50

seq1  GGGGGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGAGATAGA  96
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGAGAGAGAGAGAGAGAGATAGAGAGAGAGAGAGAGATAGA  96

seq1: chr6_126644190_126645170
seq2: B6Ng01-304P12.g_73_1059 (reverse)

seq1  ATAACCCCCTGGCT-GTGC-TCGTAATTGTAT-CCAAGTAGGTAAGACAG  47
      |||||||||||||| |||| | |||||||||| |||||||||||||||||
seq2  ATAACCCCCTGGCTGGTGCTTGGTAATTGTATCCCAAGTAGGTAAGACAG  50

seq1  GTCAGCCCCTTGCTGGGCTG-TGTTTTTAAACCAGTGGCTTGATCAATCC  96
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  GTCAGCCCCTTGCTGGGCTGTTGTTTTTAAACCAGTGGCTGGATCAATCC  100

seq1  TGCTCTATCTGTTTACACTAAATAACTCCCTTCACTTTGGGGGGTGGGAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTATCTGTTTACACTAAATAACTCCCTTCACTTTGGGGGGTGGGAG  150

seq1  CTGCTCTAACCATCCTAGAGTTCTAAGGGGTCCCAT-CCAACCCTTCGGG  195
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGCTCTAACCATCCTAGAGTTCTAAGGGGTCCCATCCCAACCCTTCGGG  200

seq1  GTGGGTTACAGTTGTGTGATTTGGACAGGAT-AATTGG-AAACCAAGGGA  243
      ||||| ||||||||||||||||||||||||| |||||| |||||||||||
seq2  GTGGG-TACAGTTGTGTGATTTGGACAGGATAAATTGGAAAACCAAGGGA  249

seq1  GCCACCTCCTGGGTACATGGGCCCTCAATCATGATAGTGAGGATGTGACC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCCTGGGTACATGGGCCCTCAATCATGATAGTGAGGATGTGACC  299

seq1  CAATTACATAGGCACATCACAGAAAAAGCAAACAGCTTATGATCGGGTTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACATAGGCACATCACAGAAAAAGCAAACAGCTTATGATCGGGTTG  349

seq1  GTTTCTCTTACTAGGAAGCTTCAAGGCTCTGGGCCCTTTACCTTATTAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTACTAGGAAGCTTCAAGGCTCTGGGCCCTTTACCTTATTAAA  399

seq1  GCATTCCTTTTGTTTTTGTTGGGCATGATGGCTACTGTGACCTTTCTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTTTTGTTTTTGTTGGGCATGATGGCTACTGTGACCTTTCTCTT  449

seq1  TGTCATTCTGACAGTCCAGTGTCCAACCCTGTGGGGAACTGCTTCTACAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTCTGACAGTCCAGTGTCCAACCCTGTGGGGAACTGCTTCTACAC  499

seq1  TAAGGGTAAAGATCCATCTCAGACATCTAAGAGTTACGAAAGGGAAGTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTAAAGATCCATCTCAGACATCTAAGAGTTACGAAAGGGAAGTGC  549

seq1  AGGGTAAATATGTACCATTTGACATGCCTCGGCCCCATGTGAGTGGCAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAATATGTACCATTTGACATGCCTCGGCCCCATGTGAGTGGCAAA  599

seq1  GCCTTCCCTGGATGAACCTCCGTGGGATGGCAAAGCTGCCCTCCAGGAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCCTGGATGAACCTCCGTGGGATGGCAAAGCTGCCCTCCAGGAAA  649

seq1  AATACCAATATTGCCAGTGTTGCAGAGAATGGCTGCCACAGCTTTCTCCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAATATTGCCAGTGTTGCAGAGAATGGCTGCCACAGCTTTCTCCT  699

seq1  CTGGATGATCATGGCCTGAAGAACACTCTCTGACAGGGACTACTCCTTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGATCATGGCCTGAAGAACACTCTCTGACAGGGACTACTCCTTCT  749

seq1  AAGATGAACTAGACCTCCATCCTAGCTCAGTTGTATACCAGACACCATAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAACTAGACCTCCATCCTAGCTCAGTTGTATACCAGACACCATAA  799

seq1  GATCCGCCTCCCTGTTTATCTGTATGTGATAAACATGCTGAACTTCTGGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCGCCTCCCTGTTTATCTGTATGTGATAAACATGCTGAACTTCTGGG  849

seq1  GTGCTGTAGCTTCTCCATCCAAGAGCCCAGCCCACCTGAACCCCGCTTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTAGCTTCTCCATCCAAGAGCCCAGCCCACCTGAACCCCGCTTCT  899

seq1  CTGTGGACATGTCAGTTCTTCCTTCGTTTCCTGGTTGCCCGAGTCAGATC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGACATGTCAGTTCTTCCTTCGTTTCCTGGTTGCCCGAGTCAGATC  949

seq1  AACCCCTGGATCTGCAGAAGGATGCTGCAAATGAATTC  981
      ||||||||||||||||||||| ||||||||||||||||
seq2  AACCCCTGGATCTGCAGAAGGTTGCTGCAAATGAATTC  987