BAC Information

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BAC

Clone NameB6Ng01-305K17
Chromosome6 (Build37)
Map Location 12,495,394 - 12,496,484
singlet/doubletsinglet
Overlap geneThsd7a
Upstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879
Downstream geneLOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305K17.bB6Ng01-305K17.g
ACCGA098902GA098903
length1,0851,175
definitionB6Ng01-305K17.b B6Ng01-305K17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctcaaaagccctctgacctccacgtgcatgtatgttcctaa
cgtagaaacaccatacacacgaaagtaaatagatatataatagatagtta
gataaataaacaatttgaaaatgtaacaacagaagtaaaactcaaataag
gatgcttatagtatacaaagattatgttaaataaataccaagaaaccacc
agtgtgtacttatgatgttaataatggtacatttcctgatattaacagga
aaatctaattttaacagcatgatagcaattgcttggtgttcaccaggctc
caaaatattgagatttgagatatatgtaaaatggtgtcttgtgaaataaa
cataagcctatagtctcttcattgaatacaatgtaccttttggcaacatt
cttttacatgtttcataagctcaaagaattaccatttaccatagttctca
gctgatgccttgtaatttaccaaaaggttcaagctttaagtatggatagg
ctcctttaaattttagggagtcagtgtttgatggacttgaacacatggta
ctcatttagttaatggaaattacactggttagtattgtatctttcttcta
ggcaacaatttacctagtcttatacagattataaccattaatccacataa
gtagacatgttcatgtatgtccttatatatgaagtatgggtcagctactc
atttatttgctagttatattttttaaagaatgatatcaaattgaagacaa
gaatagaatgaagtagaataaatttggctgaaaagaggaaaatgtggtaa
cctactaatccaatcacaaattttaagagaaatgtattataattaacaac
tggtgttaactggggatttgaacacagaaaagcagatgccctgccttata
attttgaccacaataggtatcttggatcaaggactagttaagtggagata
tatgctcaagcgtctttttttttttcaccatttgggtacttctagaattt
ttaatgaatgtaaacacccatggcagaggaacatgatgggtaggtgttcc
tctagtgtagacacaatacaggaattgcttatttc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggacatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccatgagctatggatctgcaaccctat
agtggacacattatgagctacagtaccccggagctctgactctagctgca
tatatatcaagatggcctagtcgcatcactgaagagagcccattgactgc
cactttaatgccagttacaggatcacgtcaacggggatgttgtcaaggaa
tggtgatatcatctacttcagccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_12495394_12496484
seq2: B6Ng01-305K17.b_44_1128

seq1  GAATTCACTCTCAAAAGCCCTCTGACCTCCACGTGCATGTATGTTCCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCAAAAGCCCTCTGACCTCCACGTGCATGTATGTTCCTAA  50

seq1  CGTAGAAACACCATACACACGAAAGTAAATAGATATATAATAGATAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAAACACCATACACACGAAAGTAAATAGATATATAATAGATAGTTA  100

seq1  GATAAATAAACAATTTGAAAATGTAACAACAGAAGTAAAACTCAAATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATAAACAATTTGAAAATGTAACAACAGAAGTAAAACTCAAATAAG  150

seq1  GATGCTTATAGTATACAAAGATTATGTTAAATAAATACCAAGAAACCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTATAGTATACAAAGATTATGTTAAATAAATACCAAGAAACCACC  200

seq1  AGTGTGTACTTATGATGTTAATAATGGTACATTTCCTGATATTAACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTACTTATGATGTTAATAATGGTACATTTCCTGATATTAACAGGA  250

seq1  AAATCTAATTTTAACAGCATGATAGCAATTGCTTGGTGTTCACCAGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAATTTTAACAGCATGATAGCAATTGCTTGGTGTTCACCAGGCTC  300

seq1  CAAAATATTGAGATTTGAGATATATGTAAAATGGTGTCTTGTGAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATTGAGATTTGAGATATATGTAAAATGGTGTCTTGTGAAATAAA  350

seq1  CATAAGCCTATAGTCTCTTCATTGAATACAATGTACCTTTTGGCAACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCCTATAGTCTCTTCATTGAATACAATGTACCTTTTGGCAACATT  400

seq1  CTTTTACATGTTTCATAAGCTCAAAGAATTACCATTTACCATAGTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACATGTTTCATAAGCTCAAAGAATTACCATTTACCATAGTTCTCA  450

seq1  GCTGATGCCTTGTAATTTACCAAAAGGTTCAAGCTTTAAGTATGGATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGCCTTGTAATTTACCAAAAGGTTCAAGCTTTAAGTATGGATAGG  500

seq1  CTCCTTTAAATTTTAGGGAGTCAGTGTTTGATGGACTTGAACACATGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTAAATTTTAGGGAGTCAGTGTTTGATGGACTTGAACACATGGTA  550

seq1  CTCATTTAGTTAATGGAAATTACACTGGTTAGTATTGTATCTTTCTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTAGTTAATGGAAATTACACTGGTTAGTATTGTATCTTTCTTCTA  600

seq1  GGCAACAATTTACCTAGTCTTATACAGATTATAACCATTAATCCACATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAATTTACCTAGTCTTATACAGATTATAACCATTAATCCACATAA  650

seq1  GTAGACATGTTCATGTATGTCCTTATATATGAAGTATGGGTCAGCTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACATGTTCATGTATGTCCTTATATATGAAGTATGGGTCAGCTACTC  700

seq1  ATTTATTTGCTAGTTATATTTTTTAAAGAATGATATCAAATTGAAGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGCTAGTTATATTTTTTAAAGAATGATATCAAATTGAAGACAA  750

seq1  GAATAGAATGAAGTAGAATAAATTTGGCTGAAAAGAGGAAAATGTGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAATGAAGTAGAATAAATTTGGCTGAAAAGAGGAAAATGTGGTAA  800

seq1  CCTACTAATCCAATCACAAATTTTAAGAGAAATGTATTATAATTAACAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAATCCAATCACAAATTTTAAGAGAAATGTATTATAATTAACAAC  850

seq1  TGGTGTTAACTGGGGATTTGAACACAGAAAAGCAGATGCCCTGCCTTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTAACTGGGGATTTGAACACAGAAAAGCAGATGCCCTGCCTTATA  900

seq1  ATTTTGACCACAATAGGTATCTTGGATCAAGGACTAGTTAAGTGGAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTTTGACCACAATAGGTATCTTGGATCAAGGACTAGTTAAGTGGAG-AT  949

seq1  ATATGCTTCAAGCGTCTTTTTTTTTTTCACCATTTGGGTAC-TCTAGAAT  999
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  ATATGC-TCAAGCGTCTTTTTTTTTTTCACCATTTGGGTACTTCTAGAAT  998

seq1  TTTTAAATGAATGTAAACACCCATGGCAGAAGGAACATGAATGGGTAGGT  1049
      |||| |||||||||||||||||||||||| ||||||||| ||||||||||
seq2  TTTT-AATGAATGTAAACACCCATGGCAG-AGGAACATG-ATGGGTAGGT  1045

seq1  GTTTCCTTCTAAGTGTAGACA-AATACAGGATTTGCTTATTTC  1091
      |||  | ||| |||||||||| ||||||||| |||||||||||
seq2  GTT--CCTCT-AGTGTAGACACAATACAGGAATTGCTTATTTC  1085