BAC Information

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BAC

Clone NameB6Ng01-306N21
Chromosome6 (Build37)
Map Location 128,456,979 - 128,458,021
singlet/doubletsinglet
Overlap genePzp
Upstream geneEfcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598
Downstream geneLOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306N21.bB6Ng01-306N21.g
ACCGA099788GA099789
length1,0371,039
definitionB6Ng01-306N21.b B6Ng01-306N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatttgtattacataaaaaagacttgtacctttatcactgtgc
atgcagtggtgcttcataaatgcatgctgaatgaatgacattttaaaatt
tttaaatatttatttattttatttatgagtgttctatctgcatgtaggct
tgcataccagaagaaggcagcacatgccagtgtagatggttgtaagtcac
catgtggttgctgggaattgaactcaggacctctggaagagcagtcggtg
ttcttacctctgagccatcttgccagcccccacccccttataaatttcaa
gcacactgataacacaactctagtgagaatgcagaggctgaagagatgct
atggacctgaggaccccatggtgagcctgcctttggagaaggggatactg
catttttattagactggtagaaccgtgatggtaaaagtctcctaggaaga
atgctgagtgagagtcctagggtagtagacatcttagagaagacttaaca
gggtataaacagacaggaaaaacacagagatgagaagtaatgtcagctgt
ttggcaattcaagatggcgggttagaggcagccaacagccactactcttc
atgaggaaagtcaaatcaactagagagcagttcctttcagaggtgggtga
ctgtgggaacatgctaaactcagaagggaaaacactacctactcagtggg
ggttatcttctgcagctattcatggaacagagcattgagatacagaatat
atatatatgtatatatatatacatatatatatatacacatgtataaaatg
agaaaaggaaaaaagaagaacaaataactaaatcagaaatgggcgagtga
cgtgtataaggtgtataagacgtggagaagctcatagtcgtgaacatgaa
cagcattcagtgtctgtagccaccagggaaatgcaaatcatatttacact
gacagctcaatgctagagaagcttatggagagtactgtaatgtagatgct
gaggagtcgggcgtgtgccgcaagccttattcccagc
gaattcactttgtagaccaggctggcctcgaactcagaaatccgcctgcc
tctgcctcccaagtgctgggattaatggcgtgtgccaaccacgcccagcc
ttagtccatgttttgttttcaaacctaaactgttaacaaatagaatgaaa
ttagtagtatttgaagggatgtacaagtgacctgtgtaaaggccaataac
tgtctaataaaggttaaacactgggagcttttctcaagcagagtcaagca
ctctgtaggcaacagtaataggtagtgacgtgtgaagaaaggtaaggcat
gagaatcttttaatacagctgtcactcctgaagaataccgtctaaaatcc
tagaagtgaaccttttgtgaacaagtcatgtgaaaatctactattttatg
agctacttaaaaatatacattagtaaacagcttaaaatggaggtaccctg
catgagtggagagtgctgctcccagatcacaggttttagaattaagagca
cagtgccatctcttggtatctctgatacaagatatctctgtatcttggtt
gcaggatacagagacatcaacctggaacaaagctagaagctccttccttt
ctggcaaccatacattgtgtctgaagatactacacaggcttctgccgaaa
aggggactcatcagtggtcatacccagctgtaggcccagcatgatacatt
actgacctgccgggcaaggcaattgccactgagacaataatgtcatgagt
gtttaggggtaaccaactgctctgcaattgggtttgaggcctctacacag
gatggcgtacatgcgtgattctgcaggctttatcaaatggtaattggata
tgctgtcaaactgctttctattgtactcatagaccagggcacctttcagc
cttggcccagagaatctcctttttgcagcagcaatgattcatgcagagac
ttattatctgctgagtatgagggtagtgacagttgcatgctcagccataa
atggacatcagagtgtagcagaccatgggaagggtagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128456979_128458021
seq2: B6Ng01-306N21.b_47_1083

seq1  GAATTCATATTTGTATTACATAAAAAAGACTTGTACCTTTATCACTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTGTATTACATAAAAAAGACTTGTACCTTTATCACTGTGC  50

seq1  ATGCAGTGGTGCTTCATAAATGCATGCTGAATGAATGACATTTTAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTGGTGCTTCATAAATGCATGCTGAATGAATGACATTTTAAAATT  100

seq1  TTTAAATATTTATTTATTTTATTTATGAGTGTTCTATCTGCATGTAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATTTATTTATTTTATTTATGAGTGTTCTATCTGCATGTAGGCT  150

seq1  TGCATACCAGAAGAAGGCAGCACATGCCAGTGTAGATGGTTGTAAGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACCAGAAGAAGGCAGCACATGCCAGTGTAGATGGTTGTAAGTCAC  200

seq1  CATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCGGTG  250

seq1  TTCTTACCTCTGAGCCATCTTGCCAGCCCCCACCCCCTTATAAATTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACCTCTGAGCCATCTTGCCAGCCCCCACCCCCTTATAAATTTCAA  300

seq1  GCACACTGATAACACAACTCTAGTGAGAATGCAGAGGCTGAAGAGATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTGATAACACAACTCTAGTGAGAATGCAGAGGCTGAAGAGATGCT  350

seq1  ATGGACCTGAGGACCCCATGGTGAGCCTGCCTTTGGAGAAGGGGATACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCTGAGGACCCCATGGTGAGCCTGCCTTTGGAGAAGGGGATACTG  400

seq1  CATTTTTATTAGACTGGTAGAACCGTGATGGTAAAAGTCTCCTAGGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATTAGACTGGTAGAACCGTGATGGTAAAAGTCTCCTAGGAAGA  450

seq1  ATGCTGAGTGAGAGTCCTAGGGTAGTAGACATCTTAGAGAAGACTTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGTGAGAGTCCTAGGGTAGTAGACATCTTAGAGAAGACTTAACA  500

seq1  GGGTATAAACAGACAGGAAAAACACAGAGATGAGAAGTAATGTCAGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATAAACAGACAGGAAAAACACAGAGATGAGAAGTAATGTCAGCTGT  550

seq1  TTGGCAATTCAAGATGGCGGGTTAGAGGCAGCCAACAGCCACTACTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATTCAAGATGGCGGGTTAGAGGCAGCCAACAGCCACTACTCTTC  600

seq1  ATGAGGAAAGTCAAATCAACTAGAGAGCAGTTCCTTTCAGAGGTGGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAAGTCAAATCAACTAGAGAGCAGTTCCTTTCAGAGGTGGGTGA  650

seq1  CTGTGGGAACATGCTAAACTCAGAAGGGAAAACACTACCTACTCAGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGAACATGCTAAACTCAGAAGGGAAAACACTACCTACTCAGTGGG  700

seq1  GGTTATCTTCTGCAGCTATTCATGGAACAGAGCATTGAGATACAGAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTTCTGCAGCTATTCATGGAACAGAGCATTGAGATACAGAATAT  750

seq1  ATATATATGTATATATATATACATATATATATATACACATGTATAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTATATATATATACATATATATATATACACATGTATAAAATG  800

seq1  AGAAAAGGAAAAAAGAAGAACAAATAACTAAATCAGAAAATGGGCGAGTG  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGAAAAGGAAAAAAGAAGAACAAATAACTAAATCAG-AAATGGGCGAGTG  849

seq1  ACGTGTATAAGGTGTATAAGACGTGGAGAAGCTCATAGTCGGTGAACATG  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACGTGTATAAGGTGTATAAGACGTGGAGAAGCTCATAGTC-GTGAACATG  898

seq1  AACAGCATTCAGTGTCTGTAGCCACCAGGGAAATGCAAATCATATTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCATTCAGTGTCTGTAGCCACCAGGGAAATGCAAATCATATTTACA  948

seq1  CTGACAGCTCAAATGCTAGAGAAGC-TATGGAGAAGTACTGTTAATGTAG  999
      |||||||||| |||||||||||||| ||||||| ||||||| ||||||||
seq2  CTGACAGCTC-AATGCTAGAGAAGCTTATGGAG-AGTACTG-TAATGTAG  995

seq1  ATGCTGAGGAGTCGGGCGTGGTGGCGCAAGCCTTTAATCCCAGC  1043
      ||||||||||||||||||| ||| |||||||| ||| |||||||
seq2  ATGCTGAGGAGTCGGGCGT-GTGCCGCAAGCC-TTATTCCCAGC  1037