BAC Information

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BAC

Clone NameB6Ng01-307H21
Chromosome6 (Build37)
Map Location 24,964,647 - 24,965,731
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik
Downstream geneLOC384358, Gpr37, Pot1a, EG626912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307H21.bB6Ng01-307H21.g
ACCGA100250GA100251
length1,1591,087
definitionB6Ng01-307H21.b B6Ng01-307H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgaactcacttttaaatgaatattagccat
aacacacaggataaccagattataatccacagacctacctcccccccccc
ccaaaaaaaatgtcaaataacaaggacagcccaaaggaggatgtttgaat
ctttttaagaaagggaaataaaataggtatcagaagtggatagatggagg
gaactgggtgagagaagggataaggaggagaaccagatcaagtatacaaa
gagcaggggtgagaaaacagaaatctatgaagggaagaagggcatctcta
ggacaagtcagtgacctgggccagatgggaaggggtagaggaatagcctt
tgtggtctatgggtgtgactctagctgagattcctagcagcttggcatat
gacacctgaagtggccaccacatgtagctaggcaggactcccagtgcaag
gataaggacagcaacctactcacaaatctttctaccttaattgtaaactg
cctacagagtgtgaagcagcaaagatggaacagagaccgagggaatagcc
aatcaatgactggcccaaattgagacacatcccatttgcaagaatcattc
cctgacactattaatgatactctgttacgcttgtagacaggagcctagca
taactgtcctgtgagaggttccccacccaatcaaaggaaatatatgcaga
gactcacagccaaacattagagagttcaggtagttttgtgtgagtcaagt
aggctttgaggactcaagatcgagaaacgagactcacagaggaccgaacg
agtcacacctggaacttctgggactccagagtctggaccactcactagag
ccacctggtccttggaacttaggcttaactgataaatggacaaaaggtta
cacgacctg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaa
gcagatgctgtcgaggatgtggagaaagacgaacacttccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atccaggagaggttccaaccggtaagaaggacatgctccactatgttcat
agcagccttaagctgatttcttgctgtggagcacggcagcaactatcaaa
tgctacgctaagatgaggcctgtttcttctcattccttccatagtacact
ggactgtttaatggacaggatctgagatgtgacttggatgaaaagaggct
cagacagagactttagcaacttctgtgggaaagacaacaggatcatagca
tggaagagttgagtagtgacagcctgagaaaaattgaaggataagacttc
ctccagctaattgcagtcagaggaagggcctggcttattgctagaagagg
tgaaggtgtatcagaaggatgttagggaaatgtatgtgaggcaggaatta
cagtttgatttggactcgactttagtcacagtgagactggataacctgtt
ggttggttggttatgttcctttagttgcagcatgatggaatcaggccatt
taagccatcagctataagggttatgtcatatgctcctagtatgaagtaat
gcttgtaccatgttctcatgtatataataagagccttccctaaatatcta
aatacatctgaggaaatacttagtgctgttttatgaaaattgatagaact
agctttcaatttctgatattctatttcaaagttgactagtattttatgtc
catgttgttagtctcaatattctggcttcaagtaacctcctgccttgcct
ccccaaaggagctggagccatcttgtactttctactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_24964647_24965731
seq2: B6Ng01-307H21.g_65_1151

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAAAT  50

seq1  GCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA  100

seq1  TTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAA  150

seq1  GCAGATGCTGTCGAGGATGTGGAGAAAGACGAACACTTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGCTGTCGAGGATGTGGAGAAAGACGAACACTTCCATTGTTGGTG  200

seq1  GGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAGGTTCCTCA  250

seq1  GAAAATTGGACATAGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGC  300

seq1  ATCCAGGAGAGGTTCCAACCGGTAAGAAGGACATGCTCCACTATGTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGAGAGGTTCCAACCGGTAAGAAGGACATGCTCCACTATGTTCAT  350

seq1  AGCAGCCTTAAGCTGATTTCTTGCTGTGGAGCACGGCAGCAACTATCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTAAGCTGATTTCTTGCTGTGGAGCACGGCAGCAACTATCAAA  400

seq1  TGCTACGCTAAGATGAGGCCTGTTTCTTCTCATTCCTTCCATAGTACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACGCTAAGATGAGGCCTGTTTCTTCTCATTCCTTCCATAGTACACT  450

seq1  GGACTGTTTAATGGACAGGATCTGAGATGTGACTTGGATGAAAAGAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTTTAATGGACAGGATCTGAGATGTGACTTGGATGAAAAGAGGCT  500

seq1  CAGACAGAGACTTTAGCAACTTCTGTGGGAAAGACAACAGGATCATAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAGACTTTAGCAACTTCTGTGGGAAAGACAACAGGATCATAGCA  550

seq1  TGGAAGAGTTGAGTAGTGACAGCCTGAGAAAAATTGAAGGATAAGACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGTTGAGTAGTGACAGCCTGAGAAAAATTGAAGGATAAGACTTC  600

seq1  CTCCAGCTAATTGCAGTCAGAGGAAGGGCCTGGCTTATTGCTAGAAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTAATTGCAGTCAGAGGAAGGGCCTGGCTTATTGCTAGAAGAGG  650

seq1  TGAAGGTGTATCAGAAGGATGTTAGGGAAATGTATGTGAGGCAGGAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTGTATCAGAAGGATGTTAGGGAAATGTATGTGAGGCAGGAATTA  700

seq1  CAGTTTGATTTGGACTCGACTTTAGTCACAGTGAGACTGGATAACCTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGATTTGGACTCGACTTTAGTCACAGTGAGACTGGATAACCTGTT  750

seq1  GGTTGGTTGGTTATGTTCCTTTAGTTGCAGCATGATGGAATCAGGCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTGGTTATGTTCCTTTAGTTGCAGCATGATGGAATCAGGCCATT  800

seq1  TAAGCCATCAGCTATAAGGGTTATGTCATATGCTCCTAGTATGAAGTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCATCAGCTATAAGGGTTATGTCATATGCTCCTAGTATGAAGTAAT  850

seq1  GCTTGTACCATGTTCTCATGTATATAATAAGAGCCTTCCCTAAATATCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACCATGTTCTCATGTATATAATAAGAGCCTTCCCTAAATATCTA  900

seq1  AATACATCTGAGGAAATACTTAGTGCTGTTTTATGAAAATTGATAGAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCTGAGGAAATACTTAGTGCTGTTTTATGAAAATTGATAGAACT  950

seq1  AGCTTTCAATTTCTGATATTCTAATTCAAAGTTGACTAGTA-TTTATGTC  999
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  AGCTTTCAATTTCTGATATTCTATTTCAAAGTTGACTAGTATTTTATGTC  1000

seq1  CATGTTGTTAGTCTCAATATTCTGGCTTCAAGTAACCCTCCTGCCTTGGC  1049
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  CATGTTGTTAGTCTCAATATTCTGGCTTCAAGTAA-CCTCCTGCCTT-GC  1048

seq1  CTCCC--AAGGAGCTGGAGCCATC-TGTACTTTCTACTT  1085
      |||||  ||||||||||||||||| ||||||||||||||
seq2  CTCCCCAAAGGAGCTGGAGCCATCTTGTACTTTCTACTT  1087