BAC Information

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BAC

Clone NameB6Ng01-307K21
Chromosome6 (Build37)
Map Location 22,191,192 - 22,316,964
singlet/doubletdoublet
Overlap geneA430107O13Rik, Wnt16, D6Wsu176e
Upstream geneKcnd2, LOC100041343, Tspan12, LOC100041358, Ing3, LOC667307
Downstream geneLOC100040948, LOC100040959, LOC668018, LOC668022, Ptprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307K21.bB6Ng01-307K21.g
ACCGA100387GA100388
length1,0901,140
definitionB6Ng01-307K21.b B6Ng01-307K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,191,192 - 22,192,274)(22,315,815 - 22,316,964)
sequence
gaattcaactactaggatgtatttgctttttgtaatttttaaaaactaaa
tataattacatcatttactcccccctctcctctccccaccccctctctcc
tattctccccttcactcacttccaaatttacaactccctcacccctaatt
agtattgtcacatatacataaatgcatacttatataaatgcagcctgcta
agtctgtttaatgcaggttttatatacataattctagagatggccacttg
ctcagaccaataaggtgctcattcctacgggaaggtttatctctctatag
tcagtagtttcgagtacttctttgtctaggggtggagccctgtgatattt
ttctatttccactttagtgcatctggttgtgtcgtcatcgttcaggtctt
gtttaagcaaccatgttgttgaggtcatgggtgtaggtttcctgtcattt
ctgggagacacaatcatatagttgacttcttggtcctttggctcttacaa
tcttcccacccacttctcccacgatcttccctaagctttccgtgaatggt
tgtgttgtagatgtatccgtttggtctgggtgcccacaggattagttgat
ctctgcattttgaccatttttggcatcttataatgacctctatctgctgc
aaagagaagcgtatctgtgagtacaagaacaagtatttagaatgcattta
ggaattatactggtttagtaaggtggttgtaatatgtttcttctctaaga
tccgtgactctgctagccctaggtagtgctagttgattgattggctaagt
ttctagtaaccttcatgattttcctcctgttgagtgggcctttaattcta
atcacacaggtgttggttacctcctaaatataaataccactattacatct
ttagggatatcttagttttcgtagtaaattactatgacatattctcttta
aaatgctcttaagtactgtaagagcttactgctgtttatgaaatcacctg
ggagaatgcattaataggactcaaaaaaaaaaacttcattagctatatgt
tccctcaaagacaaaaactcacggtcctctttgaaatttt
gaattctttgttatttgataaattctggcattgtggaaggatgcaaacct
gttccaggtttctggcacagtgccttattaaagacaatagtcaacagggc
tgtttttctttcttttttttctctgcagtgaaaaaatattgagtcttgat
agactatcttgcattatggcttgaatctgaaatgtccctatagtctcatg
ttttgaatctccatctaatgatgtattttaaattgccatgggtcttttaa
tgggtatgggcctaccttgtagtagaaagtcctgtggagtaagtctttga
aggttacatccaggctcctagttccagttgctctatgcctcctggtctag
tactggtggacacacctcttctaagtgaccccgtccaccagggctgagtt
tctttaccatcatgggatgaagtctctctgaaactatgagccttaaataa
atctttctataagattttccctctgttccatctttgatcgcattaacaca
aatataaccaacataccacagattacgtaagtaaaacctacacaacgatg
tgtatttgaaaaatcaaaagcagaagaaacagagcaagagatcatgggat
gctaggggcggcacctagagtaaaatcaccacaagctgtagtccccaggg
gctggagaaggtaaagcaggagttctctctgaagctgcaagggaagctgc
tctgagagtggaaaattggcctggccaagagaatggaatcgctggcctct
gaggagacctacccttccagttgggctggtccaatcactttcactgagaa
gacctctaagagatgttaaagagatgggatgatgattagtcttttaatga
gatagtttattctttcttgacagaatccagacctctcctggacctcagct
gtgtagagctgtgaggctacctgcttttctgaattatttagaaacgtgtg
actttacttctcttctatgttttctagtgtatttccttaagagagttttc
ccctaacattttgagctttctactcgctttctaatccttcccatctacca
cgtatcttttttgtcacagatctgatattccaagctgctaatgcatggcc
tttcccccgttccctctggttccgagccacagagctctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22191192_22192274
seq2: B6Ng01-307K21.b_47_1136

seq1  GAATTCAACTACTAGGATGTATTTGCTTTTTGTAATTTTTAAAAACTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTACTAGGATGTATTTGCTTTTTGTAATTTTTAAAAACTAAA  50

seq1  TATAATTACATCATTTACTCCCCCCTCTCCTCTCCCCACCCCCTCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTACATCATTTACTCCCCCCTCTCCTCTCCCCACCCCCTCTCTCC  100

seq1  TATTCTCCCCTTCACTCACTTCCAAATTTACAACTCCCTCACCCCTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCCCCTTCACTCACTTCCAAATTTACAACTCCCTCACCCCTAATT  150

seq1  AGTATTGTCACATATACATAAATGCATACTTATATAAATGCAGCCTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGTCACATATACATAAATGCATACTTATATAAATGCAGCCTGCTA  200

seq1  AGTCTGTTTAATGCAGGTTTTATATACATAATTCTAGAGATGGCCACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTTAATGCAGGTTTTATATACATAATTCTAGAGATGGCCACTTG  250

seq1  CTCAGACCAATAAGGTGCTCATTCCTACGGGAAGGTTTATCTCTCTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACCAATAAGGTGCTCATTCCTACGGGAAGGTTTATCTCTCTATAG  300

seq1  TCAGTAGTTTCGAGTACTTCTTTGTCTAGGGGTGGAGCCCTGTGATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGTTTCGAGTACTTCTTTGTCTAGGGGTGGAGCCCTGTGATATTT  350

seq1  TTCTATTTCCACTTTAGTGCATCTGGTTGTGTCGTCATCGTTCAGGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTCCACTTTAGTGCATCTGGTTGTGTCGTCATCGTTCAGGTCTT  400

seq1  GTTTAAGCAACCATGTTGTTGAGGTCATGGGTGTAGGTTTCCTGTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGCAACCATGTTGTTGAGGTCATGGGTGTAGGTTTCCTGTCATTT  450

seq1  CTGGGAGACACAATCATATAGTTGACTTCTTGGTCCTTTGGCTCTTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGACACAATCATATAGTTGACTTCTTGGTCCTTTGGCTCTTACAA  500

seq1  TCTTCCCACCCACTTCTCCCACGATCTTCCCTAAGCTTTCCGTGAATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCACCCACTTCTCCCACGATCTTCCCTAAGCTTTCCGTGAATGGT  550

seq1  TGTGTTGTAGATGTATCCGTTTGGTCTGGGTGCCCACAGGATTAGTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGTAGATGTATCCGTTTGGTCTGGGTGCCCACAGGATTAGTTGAT  600

seq1  CTCTGCATTTTGACCATTTTTGGCATCTTATAATGACCTCTATCTGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATTTTGACCATTTTTGGCATCTTATAATGACCTCTATCTGCTGC  650

seq1  AAAGAGAAGCGTATCTGTGAGTACAAGAACAAGTATTTAGAATGCATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGCGTATCTGTGAGTACAAGAACAAGTATTTAGAATGCATTTA  700

seq1  GGAATTATACTGGTTTAGTAAGGTGGTTGTAATATGTTTCTTCTCTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATACTGGTTTAGTAAGGTGGTTGTAATATGTTTCTTCTCTAAGA  750

seq1  TCCGTGACTCTGCTAGCCCTAGGTAGTGCTAGTTGATTGATTGGCTAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGACTCTGCTAGCCCTAGGTAGTGCTAGTTGATTGATTGGCTAAGT  800

seq1  TTCTAGTAACCTTCATGATTTTCCTCCTGTTGAGTGGGCCTTTAATTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTAACCTTCATGATTTTCCTCCTGTTGAGTGGGCCTTTAATTCTA  850

seq1  ATCACACAGGTGTTGGTTACCTCCTAAATATAAATACCACTATTACATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACAGGTGTTGGTTACCTCCTAAATATAAATACCACTATTACATCT  900

seq1  TTAGGGATATCTTAGTTTTCGTAGTAAATTACTATGACAATATTCTC-TT  949
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TTAGGGATATCTTAGTTTTCGTAGTAAATTACTATGAC-ATATTCTCTTT  949

seq1  AAAATGCTCTTAAGTACTGTAAGAGCTTTACTGCTG-TTATGAAATCACC  998
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  AAAATGCTCTTAAGTACTGTAAGAGC-TTACTGCTGTTTATGAAATCACC  998

seq1  T-GGAGAATGCATT-ATAGGACTCAAAAAAAAAAAACTCATAAGCTATAT  1046
      | |||||||||||| ||||||||||||||||||||  |||| ||||||||
seq2  TGGGAGAATGCATTAATAGGACTCAAAAAAAAAAACTTCATTAGCTATAT  1048

seq1  GT--CCTCAAAGAC-AAAACTCACG--TCTCTTTGAATTTTT  1083
      ||  |||||||||| ||||||||||   ||||||||| ||||
seq2  GTTCCCTCAAAGACAAAAACTCACGGTCCTCTTTGAAATTTT  1090

seq1: chr6_22315815_22316964
seq2: B6Ng01-307K21.g_67_1206 (reverse)

seq1  CCAGAGCTCTGTGGTTCAGAA-CAGAGGAGAAAGGGGGAAA-ACCATGCC  48
      |||||||||||||| || ||| |||||| ||| ||||||||  ||||| |
seq2  CCAGAGCTCTGTGGCTCGGAACCAGAGG-GAACGGGGGAAAGGCCATG-C  48

seq1  ATTTAAGCCAGCTTGG-ATATCAGATCTGGTGGACAAAAAGATACGTGGT  97
      |||  || |||||||| ||||||||||| |||   |||||||||||||||
seq2  ATT--AG-CAGCTTGGAATATCAGATCT-GTGACAAAAAAGATACGTGGT  94

seq1  AGATGGGAAGGATTTAGAAAGCGAGTAAGAAAGCTCAAAATGTTAGGGGA  147
      |||||||||||| ||||||||||||| |||||||||||||||||||||| 
seq2  AGATGGGAAGGA-TTAGAAAGCGAGT-AGAAAGCTCAAAATGTTAGGGG-  141

seq1  AAAACTCTCTTAAGGAAATAACACTAAGAAAAACAATAGAAGAGAAGTAA  197
      ||||||||||||||||||| ||||| ||||||   |||||||||||||||
seq2  AAAACTCTCTTAAGGAAAT-ACACT-AGAAAA--CATAGAAGAGAAGTAA  187

seq1  AGTCACACGTTTCTAAATAATTCAGAAAAGCAGGTAGCCTCACAGCTCTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACGTTTCTAAATAATTCAGAAAAGCAGGTAGCCTCACAGCTCTA  237

seq1  CACAGCTGAGGTCCAGGAGAGGTCTGGATTCTGTCAAGAAAGAATAAACT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGAGGTCCAGGAGAGGTCTGGATTCTGTCAAGAAAGAATAAACT  287

seq1  ATCTCATTAAAAGACTAATCATCATCCCATCTCTTTAACATCTCTTAGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTAAAAGACTAATCATCATCCCATCTCTTTAACATCTCTTAGAG  337

seq1  GTCTTCTCAGTGAAAGTGATTGGACCAGCCCAACTGGAAGGGTAGGTCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCAGTGAAAGTGATTGGACCAGCCCAACTGGAAGGGTAGGTCTC  387

seq1  CTCAGAGGCCAGCGATTCCATTCTCTTGGCCAGGCCAATTTTCCACTCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGCCAGCGATTCCATTCTCTTGGCCAGGCCAATTTTCCACTCTC  437

seq1  AGAGCAGCTTCCCTTGCAGCTTCAGAGAGAACTCCTGCTTTACCTTCTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCTTCCCTTGCAGCTTCAGAGAGAACTCCTGCTTTACCTTCTCC  487

seq1  AGCCCCTGGGGACTACAGCTTGTGGTGATTTTACTCTAGGTGCCGCCCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGGGGACTACAGCTTGTGGTGATTTTACTCTAGGTGCCGCCCCT  537

seq1  AGCATCCCATGATCTCTTGCTCTGTTTCTTCTGCTTTTGATTTTTCAAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCATGATCTCTTGCTCTGTTTCTTCTGCTTTTGATTTTTCAAAT  587

seq1  ACACATCGTTGTGTAGGTTTTACTTACGTAATCTGTGGTATGTTGGTTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCGTTGTGTAGGTTTTACTTACGTAATCTGTGGTATGTTGGTTAT  637

seq1  ATTTGTGTTAATGCGATCAAAGATGGAACAGAGGGAAAATCTTATAGAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTAATGCGATCAAAGATGGAACAGAGGGAAAATCTTATAGAAA  687

seq1  GATTTATTTAAGGCTCATAGTTTCAGAGAGACTTCATCCCATGATGGTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTAAGGCTCATAGTTTCAGAGAGACTTCATCCCATGATGGTAA  737

seq1  AGAAACTCAGCCCTGGTGGACGGGGTCACTTAGAAGAGGTGTGTCCACCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTCAGCCCTGGTGGACGGGGTCACTTAGAAGAGGTGTGTCCACCA  787

seq1  GTACTAGACCAGGAGGCATAGAGCAACTGGAACTAGGAGCCTGGATGTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGACCAGGAGGCATAGAGCAACTGGAACTAGGAGCCTGGATGTAA  837

seq1  CCTTCAAAGACTTACTCCACAGGACTTTCTACTACAAGGTAGGCCCATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAAGACTTACTCCACAGGACTTTCTACTACAAGGTAGGCCCATAC  887

seq1  CCATTAAAAGACCCATGGCAATTTAAAATACATCATTAGATGGAGATTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAAGACCCATGGCAATTTAAAATACATCATTAGATGGAGATTCA  937

seq1  AAACATGAGACTATAGGGACATTTCAGATTCAAGCCATAATGCAAGATAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAGACTATAGGGACATTTCAGATTCAAGCCATAATGCAAGATAG  987

seq1  TCTATCAAGACTCAATATTTTTTCACTGCAGAGAAAAAAAAGAAAGAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAAGACTCAATATTTTTTCACTGCAGAGAAAAAAAAGAAAGAAAA  1037

seq1  ACAGCCCTGTTGACTATTGTCTTTAATAAGGCACTGTGCCAGAAACCTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCTGTTGACTATTGTCTTTAATAAGGCACTGTGCCAGAAACCTGG  1087

seq1  AACAGGTTTGCATCCTTCCACAATGCCAGAATTTATCAAATAACAAAGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTTTGCATCCTTCCACAATGCCAGAATTTATCAAATAACAAAGAA  1137

seq1  TTC  1150
      |||
seq2  TTC  1140