BAC Information

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BAC

Clone NameB6Ng01-308D13
Chromosome6 (Build37)
Map Location 48,962,643 - 48,963,085
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp777, Zfp746, LOC665990, Krba1, Zfp467, Sspo, EG666005, Atp6v0e2, Lrrc61, Rarres2, EG330305, Repin1, Zfp775, AI854703, Gimap8, LOC100040560, Gimap9, Gimap4, Gimap6, Gimap7, LOC100041450, Gimap1, Gimap5, Gimap3, Tmem176b, Tmem176a, EG666105, Abp1, 1600015I10Rik, LOC100040589, Doxl2, Svs1
Downstream geneGpnmb, LOC666011, Igf2bp3, LOC100040626, Tra2a, Ccdc126, D330028D13Rik, Stk31, LOC384383, LOC666210, Npy
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308D13.bB6Ng01-308D13.g
ACCGA100779GA100780
length4371,191
definitionB6Ng01-308D13.b B6Ng01-308D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ccagtgaccttttctgatgcccagatgtgacacattgagtctctcaggcc
agctccactgccttccccttgagcaaggaaggttccctagaacctaagga
gttaaatgtgcattgggcgagtgtggcagggtagggatgggagtgggaac
tttacaggggaaaagaccaaggggaacttctgtcctaggaagtggagtta
gaaagtggacttggtgccaattagcagggcacaactaggaatatgaaggc
aaaagggaaagacaaattggaaacagttcatatacccctaccccatctcc
agaacaaaacaagccttttagcagcaattaagcagagatgtgaagtatag
tcaagctttaactcccttgaaggtgttaaaagtcagaaatgggctggcct
agggagatttgtaagatgatgatgatgaggaggagga
gaattctgatgtcctgcttatgaattgaagtgttttctttatccctacct
gccctcatacccatgatgtgagaagtgagtagtgatctcacatagtgtga
ccagcctttccacttagctctagggacctaggcctgcattgccgtgtata
ccataacggcctccccagggcagctgccatgtaagatgatgctgagtctc
tccaggacccagactcaccacttcactttgcttctagacctataagctga
agtccaaaagcctctgaaagtgaggcacaaagtctgactcatgaggagat
gtattctggtccaaagaacttcctgagttttgtaatttatacaaatataa
attcagggaatagacccgttgacttaaatgcacgggatacttgtggaaga
aacataaatgtgggtctggataaacttattgatatacttccccaaacaga
gagtgtgtatttaacagtgtagctcagggagttaggaatgaggcaaacac
cttgactggttggctaatatgtggaccaaaaggtggccctttgggagcag
gttagaaaggtctgatctccttgagctagcatagaaaggattcaaaggta
tggagagattgcatttccatcatagggtaatcattaagtctcttccaaca
tactgggagggtccagaagatatgtgtttgactgataccttgaacaatag
gtttgtgaacagagccatagccccttgcaaagcaatgtgagcagtcgtct
ctattgactagaccttactgtaagaaccgctgcctcacagttggaaatga
aatgagaataacttggcctgaagatgatagggaccaagtagtgacacttc
aaaatatgggctaccaaagtagacatcaaaggcaaggcaacaatcagagc
atgctgggttgggagagacctccgaccctgagctgaatattctcttcctt
aaaagcaaaataagaataagatgggctactggggttccctgcttgatctg
gacaagcagaaaactttcatgcccagttgaagcagtgtatcttaatcata
agaaccacaggatcagttgcacctcatcatctcagaacactgagaagacg
gagagcttaagttcccttaggatgacccaacacacctaaggccatttata
cctgactggatatctctcttcctaggctttgtttccaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_48962643_48963085
seq2: B6Ng01-308D13.b_47_489 (reverse)

seq1  TCCTCCTCCTCATCATCATCATCTTACAAATCTCCCTAGGCCAGCCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCATCATCATCATCTTACAAATCTCCCTAGGCCAGCCCATT  50

seq1  TCTGACTTTTAACACCTTCAAGGGAGTTAAAGCTTGACTATACTTCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTTTAACACCTTCAAGGGAGTTAAAGCTTGACTATACTTCACAT  100

seq1  CTCTGCTTAATTGCTGCTAAAAGGCTTGTTTTGTTCTGGAGATGGGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTAATTGCTGCTAAAAGGCTTGTTTTGTTCTGGAGATGGGGTAG  150

seq1  GGGTATATGAACTGTTTCCAATTTGTCTTTCCCTTTTGCCTTCATATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATATGAACTGTTTCCAATTTGTCTTTCCCTTTTGCCTTCATATTCC  200

seq1  TAGTTGTGCCCTGCTAATTGGCACCAAGTCCACTTTCTAACTCCACTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTGCCCTGCTAATTGGCACCAAGTCCACTTTCTAACTCCACTTCC  250

seq1  TAGGACAGAAGTTCCCCTTGGTCTTTTCCCCTGTAAAGTTCCCACTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGAAGTTCCCCTTGGTCTTTTCCCCTGTAAAGTTCCCACTCCCA  300

seq1  TCCCTACCCTGCCACACTCGCCCAATGCACATTTAACTCCTTAGGTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACCCTGCCACACTCGCCCAATGCACATTTAACTCCTTAGGTTCTA  350

seq1  GGGAACCTTCCTTGCTCAAGGGGAAGGCAGTGGAGCTGGCCTGAGAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCTTCCTTGCTCAAGGGGAAGGCAGTGGAGCTGGCCTGAGAGACT  400

seq1  CAATGTGTCACATCTGGGCATCAGAAAAGGTCACTGGGAATTC  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTCACATCTGGGCATCAGAAAAGGTCACTGGGAATTC  443