BAC Information

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BAC

Clone NameB6Ng01-308L06
Chromosome6 (Build37)
Map Location 63,477,006 - 63,600,060
singlet/doubletdoublet
Overlap geneGrid2
Upstream geneGA_x5J8B7W6GG0-4757855-4757501, LOC667099
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308L06.bB6Ng01-308L06.g
ACCGA101135GA101136
length1,0851,102
definitionB6Ng01-308L06.b B6Ng01-308L06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,477,006 - 63,477,535)(63,598,958 - 63,600,060)
sequence
gaattcaaagtaaataaatgtacaacattttcaaacatggaacacaatgt
aagcagtgctaagaggaaagttcatagctcaaagtaccttcataaaaaaa
ttagggagatcttatactagcaactaaacagcaaattggaaatctctaga
actaaaagaagcaaacacacctaatgggggtaaactgaagtctggctgaa
atcagtaaattagaaataagagaacaatacaaagaataaacaaaagttac
ttctttgagaaaaatcaacaaataaacaaacctgtaggcttatatttttc
aaatcctacttttaataaaagttcttaaatgcttcaacctaacttttatc
ccagcacctaccagaagtagtggaaaagacaattagggcctgtgttgaat
ttttctttagatcagatccaatcagagttttcaggatatcagcaattcag
ctcatatgaatcagtagagggcaaactcaatccacaagtaaaccttattc
ataaatcagtaataacaacttaattcagaagaaaccacaagtcttttcca
attggccagagtccatggaattgtctagaagttgtaggactaccattagt
tcttggttcatttctctctataaaatcataacaaataatgaccagcaaag
aatggcaaggtgaaccaataccataccgcaccatccatagtctgttggtt
tatatttataccctctccaaatattatattttctctcaagcatctctgat
agcaaaacatcaaataccccttttacaggctgcttccagaaaaacactat
gtgactgttctcaggaaaacattctcccacttttgcttcagcaaaaatac
tttctcattagacagtttccttgaaaaaaatcacatgatacaattgtatc
tccaaagaaaccagaaatttccactgtgaaaaaccttaaccaaagtaatt
taaatggctgaagatatccaaattcacaaaatcacaatgaaaaatgggat
atcacacacacaagaggaaacacacagatcatagtctatttgacatattt
catgtattttcttttttatttttgagcatggtggg

gaattcattctcccagccaggtgaatgacatttaaactatgtctaaaaaa
agagatcacagcttaagccaccgaatcaaaacattgctgcttcctatatg
gacataaaaatacttctctaggaggatacctttctgcaacaagcatattc
aacactttgtctgctgctgtctactgcatttgtatcaattgctcattaaa
atgacatcaaaccacttaaaaatgcctataattttatgagcaaattctga
agacttttgtagtatttaaatattcatatattgttataaatttattattt
ctaacaataacaatatacactgaaagttttaaattctggcttcataattt
tatatctgaaagtttaaatggaattttaaaatataaggtgttcagtgttg
gtgttattataatcaggaaacacttggaaggaaaaagtattgattcaatg
gcaaacaaaaatgatttattcccatataatcaaaacattttacaacagga
gaaaggattgtagttatatatttaatataatggcattgagttaagtaaac
agatatttaaagtgaaagtgaaatactttaatgcaaacactgtacttgat
aatcaatatttaaacggattcaatacttcagtttgtcacagtagttgact
taacaccataggttatttgttcagatatccaaataaagacacctacaagg
ggaaggggggagtgcagacttcttgattttctaagtagcaacttgggaat
atattctttgagaaaattgtccttaaaacctgtaatatcacacatctgaa
acttccagttttgtaggtcatttgtttcctaagtcaacatccattttata
actgatgcctttgaaaaacttgtaatcattctgatggtgcattcatatca
tcatttatgtattgatttaaaagttcagttcattggaaaatcagtataaa
tataatttagatatatcaaatatcaattttgtatttaaataaatagctta
tataactcatatgttagtaataacatgttaagtaccctgtacatatatcc
acaataagaagtgggtgtggaactgtcttagcatagcagaaacagttatg
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63477006_63477535
seq2: B6Ng01-308L06.b_621_1135

seq1  TTGTCTAGAAGTTGTAGGACTACCATTAGTTCTTGGTTCATTTCTCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAGAAGTTGTAGGACTACCATTAGTTCTTGGTTCATTTCTCTCTA  50

seq1  TAAAATCATAACAAATAATGACCAGCAAAGAATGGCAAGGTGAACCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATAACAAATAATGACCAGCAAAGAATGGCAAGGTGAACCAATA  100

seq1  CCATACCGCACCATCCATAGTCTGTTGGTTTATATTTATACCCTCTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCGCACCATCCATAGTCTGTTGGTTTATATTTATACCCTCTCCAA  150

seq1  ATATTATATTTTCTCTCAAGCATCTCTGATAGCAAAACATCAAATACCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATTTTCTCTCAAGCATCTCTGATAGCAAAACATCAAATACCCC  200

seq1  TTTTACAGGCTGCTTCCAGAAAAACACTATGTGACTGTTCTCAGGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGGCTGCTTCCAGAAAAACACTATGTGACTGTTCTCAGGAAAAC  250

seq1  ATTCTCCCACTTTTGCTTCAGCAAAAATACTTTCTCATTAGACAGTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCCACTTTTGCTTCAGCAAAAATACTTTCTCATTAGACAGTTTCC  300

seq1  TTGAAAAAAATCACATGATACAATTGTATCTCCAAAGAAACCAGAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAATCACATGATACAATTGTATCTCCAAAGAAACCAGAAATTT  350

seq1  CCACTGTGAAAAACCTTAACCAAAGTAA-TTAAATGGCTGAAAGAATATC  399
      |||||||||||||||||||||||||||| |||||||||||||   |||||
seq2  CCACTGTGAAAAACCTTAACCAAAGTAATTTAAATGGCTGAA--GATATC  398

seq1  CAAATTCACAAAATCACAAATGAAAAATGGGATATCACAACACACAAGGA  449
      ||||||||||||||||| |||||||||||||||||||| |||||||| ||
seq2  CAAATTCACAAAATCAC-AATGAAAAATGGGATATCAC-ACACACAA-GA  445

seq1  GGAAACACACAGAATCATTAGGTCTTAATTTGACAATATTTTCAATTGTA  499
      |||||||||||| |||||   ||||  ||||||| ||| |||||  ||| 
seq2  GGAAACACACAG-ATCAT--AGTCT--ATTTGAC-ATA-TTTCA--TGT-  485

seq1  ATTTTCTTTTTTATTTTGGAAGCATGTTGGG  530
      ||||||||||||||||| | |||||| ||||
seq2  ATTTTCTTTTTTATTTTTG-AGCATGGTGGG  515


seq1: chr6_63598958_63600060
seq2: B6Ng01-308L06.g_69_1170 (reverse)

seq1  TGCATACTTGTTTCTGCCTATGCT-AGACAAGTTCCACACCCACTTCTTA  49
      ||||||  |||||||| ||||||| |||| ||||||||||||||||||||
seq2  TGCATAACTGTTTCTG-CTATGCTAAGAC-AGTTCCACACCCACTTCTTA  48

seq1  TTGTGGAATTATATGTACA-GGTACTTAACATGTTATTACTAACATATGA  98
      |||||||  |||||||||| ||||||||||||||||||||||||||||||
seq2  TTGTGGA--TATATGTACAGGGTACTTAACATGTTATTACTAACATATGA  96

seq1  GTTTATATAAGCTATTTATTTAAATAC-AAATTGATATTTGATATATCTA  147
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  G-TTATATAAGCTATTTATTTAAATACAAAATTGATATTTGATATATCTA  145

seq1  AATTATATTTATACTGA-TTTCCAATGAACTGAACTTTTAAATCAATACA  196
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATTATATTTATACTGATTTTCCAATGAACTGAACTTTTAAATCAATACA  195

seq1  TAAATGATGATATGAATGCACCATCAGAATGATTACAAGTTTTTCAAAGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATGATATGAATGCACCATCAGAATGATTACAAGTTTTTCAAAGG  245

seq1  CATCAGTTATAAAATGGATGTTGACTTAGGAAACAAATGACCTACAAAAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTTATAAAATGGATGTTGACTTAGGAAACAAATGACCTACAAAAC  295

seq1  TGGAAGTTTCAGATGTGTGATATTACAGGTTTTAAGGACAATTTTCTCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTTCAGATGTGTGATATTACAGGTTTTAAGGACAATTTTCTCAA  345

seq1  AGAATATATTCCCAAGTTGCTACTTAGAAAATCAAGAAGTCTGCACTCCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATATTCCCAAGTTGCTACTTAGAAAATCAAGAAGTCTGCACTCCC  395

seq1  CCCTTCCCCTTGTAGGTGTCTTTATTTGGATATCTGAACAAATAACCTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCCTTGTAGGTGTCTTTATTTGGATATCTGAACAAATAACCTAT  445

seq1  GGTGTTAAGTCAACTACTGTGACAAACTGAAGTATTGAATCCGTTTAAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTAAGTCAACTACTGTGACAAACTGAAGTATTGAATCCGTTTAAAT  495

seq1  ATTGATTATCAAGTACAGTGTTTGCATTAAAGTATTTCACTTTCACTTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATCAAGTACAGTGTTTGCATTAAAGTATTTCACTTTCACTTTA  545

seq1  AATATCTGTTTACTTAACTCAATGCCATTATATTAAATATATAACTACAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGTTTACTTAACTCAATGCCATTATATTAAATATATAACTACAA  595

seq1  TCCTTTCTCCTGTTGTAAAATGTTTTGATTATATGGGAATAAATCATTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTCCTGTTGTAAAATGTTTTGATTATATGGGAATAAATCATTTT  645

seq1  TGTTTGCCATTGAATCAATACTTTTTCCTTCCAAGTGTTTCCTGATTATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCCATTGAATCAATACTTTTTCCTTCCAAGTGTTTCCTGATTATA  695

seq1  ATAACACCAACACTGAACACCTTATATTTTAAAATTCCATTTAAACTTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACCAACACTGAACACCTTATATTTTAAAATTCCATTTAAACTTTC  745

seq1  AGATATAAAATTATGAAGCCAGAATTTAAAACTTTCAGTGTATATTGTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAATTATGAAGCCAGAATTTAAAACTTTCAGTGTATATTGTTA  795

seq1  TTGTTAGAAATAATAAATTTATAACAATATATGAATATTTAAATACTACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGAAATAATAAATTTATAACAATATATGAATATTTAAATACTACA  845

seq1  AAAGTCTTCAGAATTTGCTCATAAAATTATAGGCATTTTTAAGTGGTTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTCAGAATTTGCTCATAAAATTATAGGCATTTTTAAGTGGTTTG  895

seq1  ATGTCATTTTAATGAGCAATTGATACAAATGCAGTAGACAGCAGCAGACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTTAATGAGCAATTGATACAAATGCAGTAGACAGCAGCAGACA  945

seq1  AAGTGTTGAATATGCTTGTTGCAGAAAGGTATCCTCCTAGAGAAGTATTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGAATATGCTTGTTGCAGAAAGGTATCCTCCTAGAGAAGTATTT  995

seq1  TTATGTCCATATAGGAAGCAGCAATGTTTTGATTCGGTGGCTTAAGCTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCCATATAGGAAGCAGCAATGTTTTGATTCGGTGGCTTAAGCTGT  1045

seq1  GATCTCTTTTTTTAGACATAGTTTAAATGTCATTCACCTGGCTGGGAGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTTTTTTTAGACATAGTTTAAATGTCATTCACCTGGCTGGGAGAA  1095

seq1  TGAATTC  1103
      |||||||
seq2  TGAATTC  1102


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