BAC Information

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BAC

Clone NameB6Ng01-308P24
Chromosome6 (Build37)
Map Location 37,010,909 - 37,143,746
singlet/doubletdoublet
Overlap geneDgki
Upstream gene9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, EG665024
Downstream geneCreb3l2, Akr1d1, LOC665046, Ybx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308P24.bB6Ng01-308P24.g
ACCGA101348GA101349
length1,0871,143
definitionB6Ng01-308P24.b B6Ng01-308P24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,010,909 - 37,011,987)(37,142,604 - 37,143,746)
sequence
gaattcaacgaagtgacctgttttgtaagtatagagaggcaatgtcaaaa
agtgatttgtaaagcgctggcgatgaaagagtcaagaaacctttcaccca
cctctgacattctaaaacaaagcctgcctgttctgaaaagggcagctaac
tcccgtggcccaagtgatccccttacaagatcaacaccacccagccttgg
ttttgtggtcttccatctcaacagcattgctctctagccattcaatgaaa
gacgtcagaaaagataaaggccttttgtcttcttgaaccaggagtcaggg
caatcttaccttgccacggagctaatcctaccaaccaagcgatcagagtt
atgactccctcctggacagttaggaagtctttatggatgaaccatttaac
tgtaaatgaaactttagctcttattccccttgagggattttttccaggtt
ataggatcataaataactggttatattaaaatacctaaaaatgatatatc
acttctttataaccatggaagtctctcccataaacaccagacaacatctt
gacagatcacagaaggaagaagccagagctttgtgtatttaaggaatgct
cacctcctgctccaggtgtcccactggaataaaagtggttctgatgatgg
aaaagaacaaagaaaacttgcctctgaagttgaggagcaagtcttaagag
ctccatgtaacatcaaatcacacatgctaatagttcttcagagttcacaa
agaaatggtttaagcaattctgtggggattgtgttagtcagtgaatagaa
tctgtcattctgtctcacaggtctccagcaataaaagatcatccagtcaa
aacaagacaattaaggaaagaaaacctcatccaggagtagaaagggtagg
caccttaactgtctgtaaacaggacatcggaaatagttgtagatacctat
cagtagggtaaagaccaacctgtgaagtatctactgaggtggaaatcatg
aaagtgaccttatttagaattaacattaggtaattaattgtaactaagtg
ctgaagaattttacccagagtctctattttaaacaaa
gaattcccccatgaacaacagttgtcttctaatgtccttgttttgaaaat
ttgtgtatgttgatttttttactctttaaaaattctatttgttttttgtt
gtgtccatccagcagctcacatgtttgggttctagtctggaaaggcatct
tagaaacctggaagagaagaagggctaggcagcagcgagataaagatgta
gctaagacagtcattctgatcaaagctcaattttactattctgcacgcgt
tatgaagcaggggaagggggccggattcccgccaaataatcttgggatcc
agtagcagggtgaccacgtgtatggctctggaacagtaaagcagcagact
ccagcagtgggcgtggcagaacgattgagcggcaagctccacacctgagc
aagcaggtttcaggctggcgaggggaggatacagtttttgtcattgtgtt
gctgtgtgtatgaagtgtgtgtgagagacactgtcgtggtgcacatgtgg
gagtcagagggactcttggtggagtcagtttctgccttccctcggcttcc
tgtcagttctggggattgagctcacgtagccacagttttgccagtgagta
cgtttctccgatgaaccgtcttgtctgcctcagttttgttttcgtaaact
gaggcacatttgaacatttacaggtgaatcctccctctcagggtgagtag
acacagacccatcagagcggggggaccttcatttttaaaagcctgctgtg
tttcacgtcacctggtcagacttagctctgatggttttcagtcttgaaat
ctattagccttgattgttaaaatttggtgcaaagactccttagacttcga
attctacctaccctataagaggtaacaaagatgtacgcttacagccactg
ccattgaagtcagtagggaaaataatgtaaagaatggtcacttcttgctt
atctcttccacccccaccccctgtgtacatggcctttgggtcaacttaaa
tgaagactctgtatcttatgttgtgggcatgccataaggtcttgattgaa
aaacatctattctacccattcattcaggccgttggagctgcagtttcttg
aaattaaattatgtgtccttatggatctgcaaaggtcccacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_37010909_37011987
seq2: B6Ng01-308P24.b_47_1133

seq1  GAATTCAACGAAGTGACCTGTTTTGTAAGTATAGAGAGGCAATGTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGAAGTGACCTGTTTTGTAAGTATAGAGAGGCAATGTCAAAA  50

seq1  AGTGATTTGTAAAGCGCTGGCGATGAAAGAGTCAAGAAACCTTTCACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTGTAAAGCGCTGGCGATGAAAGAGTCAAGAAACCTTTCACCCA  100

seq1  CCTCTGACATTCTAAAACAAAGCCTGCCTGTTCTGAAAAGGGCAGCTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGACATTCTAAAACAAAGCCTGCCTGTTCTGAAAAGGGCAGCTAAC  150

seq1  TCCCGTGGCCCAAGTGATCCCCTTACAAGATCAACACCACCCAGCCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGGCCCAAGTGATCCCCTTACAAGATCAACACCACCCAGCCTTGG  200

seq1  TTTTGTGGTCTTCCATCTCAACAGCATTGCTCTCTAGCCATTCAATGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGGTCTTCCATCTCAACAGCATTGCTCTCTAGCCATTCAATGAAA  250

seq1  GACGTCAGAAAAGATAAAGGCCTTTTGTCTTCTTGAACCAGGAGTCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCAGAAAAGATAAAGGCCTTTTGTCTTCTTGAACCAGGAGTCAGGG  300

seq1  CAATCTTACCTTGCCACGGAGCTAATCCTACCAACCAAGCGATCAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTACCTTGCCACGGAGCTAATCCTACCAACCAAGCGATCAGAGTT  350

seq1  ATGACTCCCTCCTGGACAGTTAGGAAGTCTTTATGGATGAACCATTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCCCTCCTGGACAGTTAGGAAGTCTTTATGGATGAACCATTTAAC  400

seq1  TGTAAATGAAACTTTAGCTCTTATTCCCCTTGAGGGATTTTTTCCAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAAACTTTAGCTCTTATTCCCCTTGAGGGATTTTTTCCAGGTT  450

seq1  ATAGGATCATAAATAACTGGTTATATTAAAATACCTAAAAATGATATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATCATAAATAACTGGTTATATTAAAATACCTAAAAATGATATATC  500

seq1  ACTTCTTTATAACCATGGAAGTCTCTCCCATAAACACCAGACAACATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTATAACCATGGAAGTCTCTCCCATAAACACCAGACAACATCTT  550

seq1  GACAGATCACAGAAGGAAGAAGCCAGAGCTTTGTGTATTTAAGGAATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATCACAGAAGGAAGAAGCCAGAGCTTTGTGTATTTAAGGAATGCT  600

seq1  CACCTCCTGCTCCAGGTGTCCCACTGGAATAAAAGTGGTTCTGATGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTGCTCCAGGTGTCCCACTGGAATAAAAGTGGTTCTGATGATGG  650

seq1  AAAAGAACAAAGAAAACTTGCCTCTGAAGTTGAGGAGCAAGTCTTAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACAAAGAAAACTTGCCTCTGAAGTTGAGGAGCAAGTCTTAAGAG  700

seq1  CTCCATGTAACATCAAATCACACATGCTAATAGTTCTTCAGAGTTCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTAACATCAAATCACACATGCTAATAGTTCTTCAGAGTTCACAA  750

seq1  AGAAATGGTTTAAGCAATTCTGT-GGGATTGTGTTAGTCAGTGAATAGAA  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAAATGGTTTAAGCAATTCTGTGGGGATTGTGTTAGTCAGTGAATAGAA  800

seq1  TCTGTCATTCTGTCTCACAGGTCTCCAGCAATAAAAGATCATCCAGTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCATTCTGTCTCACAGGTCTCCAGCAATAAAAGATCATCCAGTCAA  850

seq1  AACAAGACAATTAA-GAAAGAAAACCTCATCCAGGAGTAGAAAGGGTAGG  898
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AACAAGACAATTAAGGAAAGAAAACCTCATCCAGGAGTAGAAAGGGTAGG  900

seq1  CACC-TCACTGTCTGTAAACAGGACATCGGAAATAG-TGTAGATACCTAT  946
      |||| | ||||||||||||||||||||||||||||| |||||||||||||
seq2  CACCTTAACTGTCTGTAAACAGGACATCGGAAATAGTTGTAGATACCTAT  950

seq1  CAGTAGGGTAAAGACCAA-CTGTGAAGTATCTACTGA-GTGGAAATCATG  994
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  CAGTAGGGTAAAGACCAACCTGTGAAGTATCTACTGAGGTGGAAATCATG  1000

seq1  AAAGTGACCTAATTTAGAATT-ACATTAAGTAATTAA-TGTAACTAAGTG  1042
      |||||||||| |||||||||| |||||| |||||||| ||||||||||||
seq2  AAAGTGACCTTATTTAGAATTAACATTAGGTAATTAATTGTAACTAAGTG  1050

seq1  CTAGAGATTTTTACCCAAGAGTCTC-ATTTTAAACAAA  1079
      ||  ||| |||||||| |||||||| ||||||||||||
seq2  CTGAAGAATTTTACCC-AGAGTCTCTATTTTAAACAAA  1087

seq1: chr6_37142604_37143746
seq2: B6Ng01-308P24.g_64_1206 (reverse)

seq1  ATGTGGGACCTTCTGCAGA-CCATAAAGAACAACATAATTTAAT---CAG  46
      |||||||||||| |||||| |||||| ||   ||||||||||||    ||
seq2  ATGTGGGACCTT-TGCAGATCCATAAGGA--CACATAATTTAATTTCAAG  47

seq1  AAACTCCAAGCTTCCAAAGGCCTGAATGAATGGGTAGGAAATAGATGTTT  96
      ||||| | ||| ||||| |||||||||||||||||||  |||||||||||
seq2  AAACTGC-AGC-TCCAACGGCCTGAATGAATGGGTAG--AATAGATGTTT  93

seq1  TTCAATCAGGACCTTATTGCATGCCCACAACATAAGATACAGAGTC-TCA  145
      |||||||| |||||||| |||||||||||||||||||||||||||| |||
seq2  TTCAATCAAGACCTTATGGCATGCCCACAACATAAGATACAGAGTCTTCA  143

seq1  ATTAAGTTGA-CCAAAGGCCATGTTAACACA-GGGGTGGGGGTGG-AGAG  192
       ||||||||| |||||||||||||  ||||| ||||||||||||| ||||
seq2  TTTAAGTTGACCCAAAGGCCATGT--ACACAGGGGGTGGGGGTGGAAGAG  191

seq1  ATAAGCA--GAGTGACCATTTCTTTACATTATTTTCCCTACTGACTTCAA  240
      |||||||   |||||||| |||||||||||||||||||||||||||||||
seq2  ATAAGCAAGAAGTGACCA-TTCTTTACATTATTTTCCCTACTGACTTCAA  240

seq1  TGGCAGTGGCTGTAAGCGTACATCTTTGTTACCTCTTATAGGGTAGGTAG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGGCTGTAAGCGTACATCTTTGTTACCTCTTATAGGGTAGGTAG  290

seq1  AATTCGAAGTCTAAGGAGTCTTTGCACCAAATTTTAACAATCAAGGCTAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGAAGTCTAAGGAGTCTTTGCACCAAATTTTAACAATCAAGGCTAA  340

seq1  TAGATTTCAAGACTGAAAACCATCAGAGCTAAGTCTGACCAGGTGACGTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCAAGACTGAAAACCATCAGAGCTAAGTCTGACCAGGTGACGTG  390

seq1  AAACACAGCAGGCTTTTAAAAATGAAGGTCCCCCCGCTCTGATGGGTCTG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGCAGGCTTTTAAAAATGAAGGTCCCCCCGCTCTGATGGGTCTG  440

seq1  TGTCTACTCACCCTGAGAGGGAGGATTCACCTGTAAATGTTCAAATGTGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACTCACCCTGAGAGGGAGGATTCACCTGTAAATGTTCAAATGTGC  490

seq1  CTCAGTTTACGAAAACAAAACTGAGGCAGACAAGACGGTTCATCGGAGAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTACGAAAACAAAACTGAGGCAGACAAGACGGTTCATCGGAGAA  540

seq1  ACGTACTCACTGGCAAAACTGTGGCTACGTGAGCTCAATCCCCAGAACTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTCACTGGCAAAACTGTGGCTACGTGAGCTCAATCCCCAGAACTG  590

seq1  ACAGGAAGCCGAGGGAAGGCAGAAACTGACTCCACCAAGAGTCCCTCTGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGCCGAGGGAAGGCAGAAACTGACTCCACCAAGAGTCCCTCTGA  640

seq1  CTCCCACATGTGCACCACGACAGTGTCTCTCACACACACTTCATACACAC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACATGTGCACCACGACAGTGTCTCTCACACACACTTCATACACAC  690

seq1  AGCAACACAATGACAAAAACTGTATCCTCCCCTCGCCAGCCTGAAACCTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACACAATGACAAAAACTGTATCCTCCCCTCGCCAGCCTGAAACCTG  740

seq1  CTTGCTCAGGTGTGGAGCTTGCCGCTCAATCGTTCTGCCACGCCCACTGC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCAGGTGTGGAGCTTGCCGCTCAATCGTTCTGCCACGCCCACTGC  790

seq1  TGGAGTCTGCTGCTTTACTGTTCCAGAGCCATACACGTGGTCACCCTGCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTGCTGCTTTACTGTTCCAGAGCCATACACGTGGTCACCCTGCT  840

seq1  ACTGGATCCCAAGATTATTTGGCGGGAATCCGGCCCCCTTCCCCTGCTTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATCCCAAGATTATTTGGCGGGAATCCGGCCCCCTTCCCCTGCTTC  890

seq1  ATAACGCGTGCAGAATAGTAAAATTGAGCTTTGATCAGAATGACTGTCTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGCGTGCAGAATAGTAAAATTGAGCTTTGATCAGAATGACTGTCTT  940

seq1  AGCTACATCTTTATCTCGCTGCTGCCTAGCCCTTCTTCTCTTCCAGGTTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATCTTTATCTCGCTGCTGCCTAGCCCTTCTTCTCTTCCAGGTTT  990

seq1  CTAAGATGCCTTTCCAGACTAGAACCCAAACATGTGAGCTGCTGGATGGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATGCCTTTCCAGACTAGAACCCAAACATGTGAGCTGCTGGATGGA  1040

seq1  CACAACAAAAAACAAATAGAATTTTTAAAGAGTAAAAAAATCAACATACA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAAAAAACAAATAGAATTTTTAAAGAGTAAAAAAATCAACATACA  1090

seq1  CAAATTTTCAAAACAAGGACATTAGAAGACAACTGATGTTCATGGGGGAA  1140
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAATTTTCAAAACAAGGACATTAGAAGACAACTGTTGTTCATGGGGGAA  1140

seq1  TTC  1143
      |||
seq2  TTC  1143