BAC Information

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BAC

Clone NameB6Ng01-310D16
Chromosome6 (Build37)
Map Location 37,260,983 - 37,427,605
singlet/doubletdoublet
Overlap geneCreb3l2
Upstream gene9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024
Downstream geneAkr1d1, LOC665046, Ybx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik, LOC665125, Zc3hav1l, Zc3hav1, Rpl30-ps1, Ttc26, D130059P03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310D16.bB6Ng01-310D16.g
ACCGA102264GA102265
length1,1511,030
definitionB6Ng01-310D16.b B6Ng01-310D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,426,452 - 37,427,605)(37,260,983 - 37,262,007)
sequence
gaattctttgagttaattttgtattcagccactttgctgaaagtgcttat
cagctggtagaatatgggggatctcctatatatactatcatatctgagga
tagcgaaactttgacttcttcctttccaatgtctaatcccttgatctcct
ttagttgccttattgtctagctaatcaatcacatctccataaagttgaat
gtttcaggaaatcatctctcagtaaaacaaagctaaaaagaagccaggaa
cttctaaagtacatcgtagaaagacaagcagtttgcatgagccaaaattt
atttttgctttggacatggcattacccaccaaaacaattctgggcacagt
gagagcagagaggaattccatgagatggaaacaatgacatttatgtaatt
ggcacagcaacgcagagtgacaatttcagcagactactgtgaagcgtctc
taagatctgggaatgaaaacagtacatgatgggactcagggcctccactt
cagaactgcaaccaaattactcacagagtttacatactagcttgtagatt
ttgtctgggagaaaagatattctccaaattacagctgaattaccaatgga
ccactagctacattaacaatctgtcaatttgtttccaagagttttagaaa
atcttcatatatatatatactggtttttcaagacagggtttctctgtata
gccctggatgtcctggaactcactttgtagaccagtttggcctcgaactc
agaaatctgcctgtctctgcctcccaagtgctgggattaaaggcgtgggc
caccactgcccggctcttttatatctttatagattttataaacctcttta
ttttattattatttattagatattttctttatttacatttcaaatgttat
tccctttcctggcttctcctccaaaaacccctatcccatcacctctcccc
tgatcaccagccacccactcccgctttccccacctgacattcccctacac
tggggcatccagccttctcaagaccatggcctctcctttctattgatgtc
ttgaaaagtcatcctctgctacatatgcagatgaagtcatggtcctccaa
tgttatactctttggttgctgatttaatccatgaagcttagggtaccttg
t
gaattcttttgaagtctcctagattcatttgaattctttctattatcact
ttaattcacacgattttttttttttgcagacaagccgcttgttacataac
aatagaatctaaatagttctcaaatgtaatatgaaagtataaaggactgg
taattaatctgaaaccacagtatcatggatgaccatgttgccaaattgaa
tcccttcagtaagatagagctctgtttgcctccagagaaggtttgagggt
gggtactgtgaaaaccatgaggtctaatcatatctctaggctgcaatcag
aaggaccgctcagctcctggcctgcaggaacaccacttgcctgtgcttag
caaacattttcataaccattctgtcttccttagctcacaatcataaaaca
ttgttactcggtgatcagtgcccatgggccctgaaatctcacaaccgtga
tgaagggctgtcctagttggtgcaaagtatgtgtatgtgccctgcattag
tttttgattggtcacaagcatgaagagaaaaggtttaacattgaaaagaa
ataatagaagctgtaggttcttgtggtctactgaggagcattattcaaca
ctgcaaccctctcgttatctatgggaagttctccactgttttgctgttca
tctgcttcagtaagtgttaattcctccaggacagctagtccgtggctcta
gcacattacctgggtacaccctacagtgatgcccctgtgatcctgccggt
gacccactgcctgattttttcagcgagcgcagacctatgtgactatggat
tcctgagcttttctgctatggagtttgtagcagttgattccctgggattg
gagaagtcagtggaattagagaacagagcaatcaggctcagtccacaggg
ttagccaatttcagatgtggggatgggggtgaaggttcatctggctgctg
gctcacctacctcaaaccacaatgggcattagattaaaccatggagcact
cacctcatctttacactttcattcagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_37426452_37427605
seq2: B6Ng01-310D16.b_45_1195 (reverse)

seq1  ACAAGTACCCCCAGAGCTCTCATGGATTAAACCACCAACCAAAGAGTAT-  49
      |||||   ||| | |||| |||||||||||| || |||||||||||||| 
seq2  ACAAGGTACCCTA-AGCT-TCATGGATTAAATCAGCAACCAAAGAGTATA  48

seq1  ACATGGAGGGACCCATGACTCCATCTGCATATGTAGCAGAGGATGACCTT  99
      |||| |  ||| |||||||| |||||||||||||||||||||||||| ||
seq2  ACATTGGAGGA-CCATGACTTCATCTGCATATGTAGCAGAGGATGACTTT  97

seq1  TTCAGACATCAATAG-AAGGAGAGGCCCTTGGTCCTGAGAAGGCTGGATG  148
      |  |||||||||||| ||||||||| || ||||| |||||||||||||||
seq2  TCAAGACATCAATAGAAAGGAGAGG-CCATGGTCTTGAGAAGGCTGGATG  146

seq1  CCCCAGTGTAGGGGAATGTCAGGGTGGGGAAGCGGGAGTGGGTGGGCTGG  198
      |||||||||||||||||||||||  ||| |||||||||||||| ||||||
seq2  CCCCAGTGTAGGGGAATGTCAGGTGGGGAAAGCGGGAGTGGGT-GGCTGG  195

seq1  TGATCAGGGGAGAGGTGATGGGATAGGGGTTTTTGGAGGAGAAGCCAGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGGGGAGAGGTGATGGGATAGGGGTTTTTGGAGGAGAAGCCAGGA  245

seq1  AAGGGAATAACATTTGAAATGTAAATAAAGAAAATATCTAATAAATAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATAACATTTGAAATGTAAATAAAGAAAATATCTAATAAATAATA  295

seq1  ATAAAATAAAGAGGTTTATAAAATCTATAAAGATATAAAAGAGCCGGGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAGAGGTTTATAAAATCTATAAAGATATAAAAGAGCCGGGCA  345

seq1  GTGGTGGCCCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCCCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGCAG  395

seq1  ATTTCTGAGTTCGAGGCCAAACTGGTCTACAAAGTGAGTTCCAGGACATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTCGAGGCCAAACTGGTCTACAAAGTGAGTTCCAGGACATC  445

seq1  CAGGGCTATACAGAGAAACCCTGTCTTGAAAAACCAGTATATATATATAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTATACAGAGAAACCCTGTCTTGAAAAACCAGTATATATATATAT  495

seq1  GAAGATTTTCTAAAACTCTTGGAAACAAATTGACAGATTGTTAATGTAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTTTCTAAAACTCTTGGAAACAAATTGACAGATTGTTAATGTAGC  545

seq1  TAGTGGTCCATTGGTAATTCAGCTGTAATTTGGAGAATATCTTTTCTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTCCATTGGTAATTCAGCTGTAATTTGGAGAATATCTTTTCTCCC  595

seq1  AGACAAAATCTACAAGCTAGTATGTAAACTCTGTGAGTAATTTGGTTGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATCTACAAGCTAGTATGTAAACTCTGTGAGTAATTTGGTTGCA  645

seq1  GTTCTGAAGTGGAGGCCCTGAGTCCCATCATGTACTGTTTTCATTCCCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAGTGGAGGCCCTGAGTCCCATCATGTACTGTTTTCATTCCCAG  695

seq1  ATCTTAGAGACGCTTCACAGTAGTCTGCTGAAATTGTCACTCTGCGTTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGAGACGCTTCACAGTAGTCTGCTGAAATTGTCACTCTGCGTTGC  745

seq1  TGTGCCAATTACATAAATGTCATTGTTTCCATCTCATGGAATTCCTCTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAATTACATAAATGTCATTGTTTCCATCTCATGGAATTCCTCTCT  795

seq1  GCTCTCACTGTGCCCAGAATTGTTTTGGTGGGTAATGCCATGTCCAAAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCACTGTGCCCAGAATTGTTTTGGTGGGTAATGCCATGTCCAAAGC  845

seq1  AAAAATAAATTTTGGCTCATGCAAACTGCTTGTCTTTCTACGATGTACTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATTTTGGCTCATGCAAACTGCTTGTCTTTCTACGATGTACTT  895

seq1  TAGAAGTTCCTGGCTTCTTTTTAGCTTTGTTTTACTGAGAGATGATTTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTTCCTGGCTTCTTTTTAGCTTTGTTTTACTGAGAGATGATTTCC  945

seq1  TGAAACATTCAACTTTATGGAGATGTGATTGATTAGCTAGACAATAAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATTCAACTTTATGGAGATGTGATTGATTAGCTAGACAATAAGGC  995

seq1  AACTAAAGGAGATCAAGGGATTAGACATTGGAAAGGAAGAAGTCAAAGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGGAGATCAAGGGATTAGACATTGGAAAGGAAGAAGTCAAAGTT  1045

seq1  TCGCTATCCTCAGATATGATAGTATATATAGGAGATCCCCCATATTCTAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTATCCTCAGATATGATAGTATATATAGGAGATCCCCCATATTCTAC  1095

seq1  CAGCTGATAAGCACTTTCAGCAAAGTGGCTGAATACAAAATTAACTCAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGATAAGCACTTTCAGCAAAGTGGCTGAATACAAAATTAACTCAAA  1145

seq1  GAATTC  1154
      ||||||
seq2  GAATTC  1151

seq1: chr6_37260983_37262007
seq2: B6Ng01-310D16.g_68_1097

seq1  GAATTCTTTTGAAGTCTCCTAGATTCATTTGAATTCTTTCTATTATCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGAAGTCTCCTAGATTCATTTGAATTCTTTCTATTATCACT  50

seq1  TTAATTCACACGATTTTTTTTTTTTGCAGACAAGCCGCTTGTTACATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCACACGATTTTTTTTTTTTGCAGACAAGCCGCTTGTTACATAAC  100

seq1  AATAGAATCTAAATAGTTCTCAAATGTAATATGAAAGTATAAAGGACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATCTAAATAGTTCTCAAATGTAATATGAAAGTATAAAGGACTGG  150

seq1  TAATTAATCTGAAACCACAGTATCATGGATGACCATGTTGCCAAATTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATCTGAAACCACAGTATCATGGATGACCATGTTGCCAAATTGAA  200

seq1  TCCCTTCAGTAAGATAGAGCTCTGTTTGCCTCCAGAGAAGGTTTGAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCAGTAAGATAGAGCTCTGTTTGCCTCCAGAGAAGGTTTGAGGGT  250

seq1  GGGTACTGTGAAAACCATGAGGTCTAATCATATCTCTAGGCTGCAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGTGAAAACCATGAGGTCTAATCATATCTCTAGGCTGCAATCAG  300

seq1  AAGGACCGCTCAGCTCCTGGCCTGCAGGAACACCACTTGCCTGTGCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCGCTCAGCTCCTGGCCTGCAGGAACACCACTTGCCTGTGCTTAG  350

seq1  CAAACATTTTCATAACCATTCTGTCTTCCTTAGCTCACAATCATAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTTTCATAACCATTCTGTCTTCCTTAGCTCACAATCATAAAACA  400

seq1  TTGTTACTCGGTGATCAGTGCCCATGGGCCCTGAAATCTCACAACCGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACTCGGTGATCAGTGCCCATGGGCCCTGAAATCTCACAACCGTGA  450

seq1  TGAAGGGCTGTCCTAGTTGGTGCAAAGTATGTGTATGTGCCCTGCATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGCTGTCCTAGTTGGTGCAAAGTATGTGTATGTGCCCTGCATTAG  500

seq1  TTTTTGATTGGTCACAAGCATGAAGAGAAAAGGTTTAACATTGAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATTGGTCACAAGCATGAAGAGAAAAGGTTTAACATTGAAAAGAA  550

seq1  ATAATAGAAGCTGTAGGTTCTTGTGGTCTACTGAGGAGCATTATTCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGAAGCTGTAGGTTCTTGTGGTCTACTGAGGAGCATTATTCAACA  600

seq1  CTGCAACCCTCTCGTTATCTATGGGAAGTTCTCCACTGTTTTGCTGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACCCTCTCGTTATCTATGGGAAGTTCTCCACTGTTTTGCTGTTCA  650

seq1  TCTGCTTCAGTAAGTGTTAATTCCTCCAGGACAGCTAGTCCGTGGCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCAGTAAGTGTTAATTCCTCCAGGACAGCTAGTCCGTGGCTCTA  700

seq1  GCACATTACCTGGGTACACCCTACAGTGATGCCCCTGTGATCCTGCCGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTACCTGGGTACACCCTACAGTGATGCCCCTGTGATCCTGCCGGT  750

seq1  GACCCACTGCCTGATTTTTTCAGCGAGCGCAGACCTATGTGACTATGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACTGCCTGATTTTTTCAGCGAGCGCAGACCTATGTGACTATGGAT  800

seq1  TCCTGAGCTTTTCTGCTATGGAGTTTGTAGCAGTTGATTCCCT-GGATTG  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCTGAGCTTTTCTGCTATGGAGTTTGTAGCAGTTGATTCCCTGGGATTG  850

seq1  GAGAAGTCAGTGGAATTAGAGAACAGAGCAATCAGGCTCAGTCCACA-GG  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGAAGTCAGTGGAATTAGAGAACAGAGCAATCAGGCTCAGTCCACAGGG  900

seq1  TTAGCCAATTTCAGATGTGGGGAT-GGGGTGAAGGTTCATCTGGCTGCTG  947
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTAGCCAATTTCAGATGTGGGGATGGGGGTGAAGGTTCATCTGGCTGCTG  950

seq1  GCTCACCTACCTC-ACCCACAATGGGCATTTAGATTAAACCAT-GAGCAC  995
      ||||||||||||| | |||||||||||| |||||||||||||| ||||||
seq2  GCTCACCTACCTCAAACCACAATGGGCA-TTAGATTAAACCATGGAGCAC  999

seq1  TCA-CTCATCTTTACACTTTCATTCAGCTGG  1025
      ||| |||||||||||||||||||||||||||
seq2  TCACCTCATCTTTACACTTTCATTCAGCTGG  1030