MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-311O13
Chromosome	6 (Build37)
Map Location	50,853,528 - 50,940,763
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100041653, LOC624524, Mpp6, Dfna5h, LOC100041681, Osbpl3, Cycs, 4921507P07Rik, LOC213320, EG666302, EG666308, EG666310, Npvf, LOC100040877
Downstream gene	EG625167, Nfe2l3, Hnrpa2b1, Cbx3, Snx10, LOC100041820, Skap2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041653 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC624524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs

name	Mpp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56524 MGI:1927340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dfna5h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54722 MGI:1889850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041681 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Osbpl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71720 MGI:1918970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cycs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13063 MGI:88578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921507P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70821 MGI:1918071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC213320 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	EG666302 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666302 MGI:3644146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG666308 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666308 MGI:3644148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG666310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666310 MGI:3647078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Npvf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60531 MGI:1926488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040877 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040877
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG625167 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625167 MGI:3643041
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Nfe2l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18025 MGI:1339958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnrpa2b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53379 MGI:104819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cbx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12417 MGI:108515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snx10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71982 MGI:1919232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041820 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Skap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54353 MGI:1889206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041653 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255152 GeneID:100041653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041653 transcript_id : XM_001477005.1

name	LOC624524 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94377369 GeneID:624524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs product : hypothetical LOC624524 transcript_id : XM_898388.2

name	Mpp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910473 GeneID:56524 MGI:1927340
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) transcript_id : NM_019939.1

name	Dfna5h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350022 GeneID:54722 MGI:1889850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deafness, autosomal dominant 5 homolog (human) transcript_id : NM_018769.2

name	LOC100041681 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255156 GeneID:100041681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100041681 transcript_id : XM_001477075.1

name	Osbpl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802870 GeneID:71720 MGI:1918970
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 3 transcript_id : NM_027881.2

name	Cycs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370730 GeneID:13063 MGI:88578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c, somatic transcript_id : NM_007808.4

name	4921507P07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347533 GeneID:70821 MGI:1918071
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921507P07 gene transcript_id : NM_027564.2

name	Npvf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11230795 GeneID:60531 MGI:1926488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide VF precursor transcript_id : NM_021892.1

name	EG625167 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377375 GeneID:625167 MGI:3643041
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG625167 transcript_id : XM_898623.2

name	Nfe2l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754833 GeneID:18025 MGI:1339958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor, erythroid derived 2, like 3 transcript_id : NM_010903.1

name	Hnrpa2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109134361 GeneID:53379 MGI:104819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A2/B1 transcript_id : NM_016806.2

name	Hnrpa2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109134360 GeneID:53379 MGI:104819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A2/B1 transcript_id : NM_182650.3

name	Cbx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:108860694 GeneID:12417 MGI:108515
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromobox homolog 3 (Drosophila HP1 gamma) transcript_id : NM_007624.3

name	Snx10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369538 GeneID:71982 MGI:1919232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 10 transcript_id : NM_028035.3

name	LOC100041820 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255168 GeneID:100041820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100041820 transcript_id : XM_001477302.1

name	Skap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980887 GeneID:54353 MGI:1889206
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : src family associated phosphoprotein 2 transcript_id : NM_018773.2

name	LOC100041653 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255153 GeneID:100041653
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477055.1

name	LOC624524 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82901024 GeneID:624524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903481.1

name	Mpp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910474 CCDS:CCDS20128.1 GeneID:56524 MGI:1927340
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004385 - guanylate kinase activity [Evidence ISS]; GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IEA]; GO:0008022 - protein C-terminus binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 6) protein_id : NP_064323.1

name	Dfna5h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055204 CCDS:CCDS20130.1 GeneID:54722 MGI:1889850
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0035315 - hair cell differentiation [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence ISS] codon_start : 1 note : nonsyndromic hearing impairment protein product : deafness, autosomal dominant 5 protein protein_id : NP_061239.1

name	LOC100041681 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255157 GeneID:100041681
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477125.1

name	Osbpl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21687076 GeneID:71720 MGI:1918970
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : oxysterol-binding protein-related protein 3 product : oxysterol-binding protein-like protein 3 protein_id : NP_082157.1

name	Cycs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681095 CCDS:CCDS20131.1 GeneID:13063 MGI:88578
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0008635 - caspase activation via cytochrome c [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : cytochrome c, somatic protein_id : NP_031834.1

name	4921507P07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21389313 CCDS:CCDS20132.1 GeneID:70821 MGI:1918071
definition	codon_start : 1 product : hypothetical protein LOC70821 protein_id : NP_081840.1

name	Npvf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11230796 CCDS:CCDS20133.1 GeneID:60531 MGI:1926488
definition	GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 note : RFamide related peptide product : RFamide-related peptide protein_id : NP_068692.1

name	EG625167 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82901034 GeneID:625167 MGI:3643041
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903716.1

name	Nfe2l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754834 CCDS:CCDS20134.1 GeneID:18025 MGI:1339958
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : nuclear factor, erythroid derived 2, like 3 protein_id : NP_035033.1

name	Hnrpa2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32880197 GeneID:53379 MGI:104819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence ISS]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; hnRNP A2/B1; heterogenous nuclear ribonucleoprotein A2/B1 product : heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 protein_id : NP_872591.1

name	Hnrpa2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109134362 GeneID:53379 MGI:104819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence ISS]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; hnRNP A2/B1; heterogenous nuclear ribonucleoprotein A2/B1 product : heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 protein_id : NP_058086.2

name	Cbx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:108860695 CCDS:CCDS20135.1 GeneID:12417 MGI:108515
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005701 - polytene chromosome chromocenter [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : heterochromatin protein 1 gamma product : chromobox homolog 3 protein_id : NP_031650.3

name	Snx10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560088 CCDS:CCDS20136.1 GeneID:71982 MGI:1919232
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : sorting nexin 10 protein_id : NP_082311.2

name	LOC100041820 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255169 GeneID:100041820
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477352.1

name	Skap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055324 CCDS:CCDS20137.1 GeneID:54353 MGI:1889206
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence ISS] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence IMP] codon_start : 1 note : Src-associated adaptor protein product : SKAP55 homologue protein_id : NP_061243.1

name	EG666302 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666302
definition	number : 1 pseudo : _no_value

name	EG666308 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666308
definition	number : 1 pseudo : _no_value

name	EG666310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666310
definition	number : 2 pseudo : _no_value

name	EG666310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666310
definition	number : 1 pseudo : _no_value

name	LOC100040877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040877
definition	number : 3 pseudo : _no_value

name	LOC100040877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040877
definition	number : 2 pseudo : _no_value

name	LOC100040877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040877
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:216875
definition	standard_name : RH133592

name	(CDS detail)
type	STS
link
xref	UniSTS:123302
definition	standard_name : 16.MMHAP31FLF1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143111
definition	standard_name : Fin15

name	(CDS detail)
type	STS
link
xref	UniSTS:163384
definition	standard_name : U42384

name	(CDS detail)
type	STS
link
xref	UniSTS:207954
definition	standard_name : BB219592

name	(CDS detail)
type	STS
link
xref	UniSTS:124448
definition	standard_name : 42.MHAa90d6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179371
definition	standard_name : X01756

name	(CDS detail)
type	STS
link
xref	UniSTS:130823
definition	standard_name : D6Mit276

name	(CDS detail)
type	STS
link
xref	UniSTS:124095
definition	standard_name : 34.MMHAP57FLD4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130660
definition	standard_name : D6Mit119

name	(CDS detail)
type	STS
link
xref	UniSTS:116607
definition	standard_name : D6Mit33

name	(CDS detail)
type	STS
link
xref	UniSTS:130788
definition	standard_name : D6Mit240

name	(CDS detail)
type	STS
link
xref	UniSTS:130789
definition	standard_name : D6Mit240.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130822
definition	standard_name : D6Mit275

name	(CDS detail)
type	STS
link
xref	UniSTS:110956
definition	standard_name : AU046983

name	(CDS detail)
type	STS
link
xref	UniSTS:163385
definition	standard_name : AB013852

name	(CDS detail)
type	STS
link
xref	UniSTS:207955
definition	standard_name : BB463959

name	(CDS detail)
type	STS
link
xref	UniSTS:498450
definition	standard_name : Snx10

name	(CDS detail)
type	STS
link
xref	UniSTS:7162
definition	standard_name : GDB:1317142

name	(CDS detail)
type	STS
link
xref	UniSTS:159506
definition	standard_name : AA960083

name	LOC213320 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255130 GeneID:213320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to crooked neck-like 1 protein pseudo : _no_value transcript_id : XR_032186.1

clone name	MSMg01-237O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341K09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-468H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491I03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059B03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-138I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155P11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-128E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342C22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-311O13.b	B6Ng01-311O13.g
ACC	GA103511	GA103512
length	1,106	987
definition	B6Ng01-311O13.b	B6Ng01-311O13.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(50,853,528 - 50,854,647)	(50,939,763 - 50,940,763)
sequence	gaattccaaacctacagctttccagatgaaataagaaacagaagtaataa acaaaaaagagtgatttccagtttcccattatggccaacgacatccttaa ttccttattctctttgccctgcctattcctgttctctcactagtcctttg gggtctggaaggaaggcagacctcttgttcatctccaggtatgctacatt ttatccccagggaatgtttatgtacagatacaactaaatcgagaaaacag gactctgtgcttggcaagggtcctagtgaggcctgagtgtggcctggaga acagagggtgacatcacaaaggaaatgtgtccagaaaagaaaggttagaa aatagtggaactgaatccaaggctgatacggagcaaaagcaccagtgatg tcccgatgtcagcacccaggcattgctgcatggggaaccacagcatgctg ctttacctggctttcctttgcatgaaatgagagtgtccctggattgattt cagggttgtaatgattatatataacctcagtgtagaataagtattggttc ctcctgcatttcactcagtattttttttcattacttcttgaaagttccag ttcacattagtcctctgttcaccagctctaatgtgtgtgtgcgcatgtgc acatgagtcctgttgtgtgtggaggtcagagatcaatctcagatgtcact tctcaggagctgtcatcattttccccctctctccatctctattttgcata ctcttatggttttgctttgttgttttgagatagggtctttcactggctta gagctcaacatcaagccctagaatcttgcccctgcttctccagaaaaggc attacaaacatgcaccaccatgcctgattatttctgtgagaaacaggtgt agaggaattttatccagtaaacatgtctgctctggcagagagcccatcga aagtcctagtctatctaatcagccagatgaatcatacactgattacagta tgatctggctgggaatacaaacacaccttagtacaccaccttaatcccca acatggaaagctagtttgtagacgacctgcatgcctgaaatattgtctat tgaggg	gaattctttgttgccacggccaaaaagattctttcaggtgactatggaga cgatgaattgtaaaaggcagggatggacacagggagagcaagcaaggagt tacagtgagtgctgctttaatgtagtcccagcggtagaatggagaagata actggcgaagcatatcctgacagcactgccctcagtaagatcttccccca gaaaggatggaggcaggtcagggaaagggatgtgtgatgggcagcgtgta ctttggatttgagggaagggatagcgttgatagaattagggtgaagagaa aggaagtcagttggtcagtgggcatgtggcttcagctaggtgtagactct tcaacaaggaagagactacaccttatgtagctctggattcttagaatcca gaacagtgatgggtgcatagaaggtactacttaaatcaaccacagaggga agaaagcaggagccaagtttaccaagtgatatccccactgattttgtcac tcagttaattcagcaactatgtagtgatgaaaggcccaatagttattcat tcgcttaacatttcttaatcacctatcatgtcagaggctgtgcactggac acggtaagtcattgtgtctgactctgaggagctgacggtggtggggactc agatgagaaagcacaagctaccagtgcagcaagaagcgtgtgggcagcag cttgtgggagccgagagtctccagggcagctgctgaggagacagccttca gaagaggcatgggggaacatgtgacacacaacaacacaaggaaggagagg aggaggcttgaccaagaagttgttgtttgtttgtttgtttagcacatgca agaaactactgcgtgggattcaggttgtgttggagaagcgggtatgcatg aaggactttggcatttcatgccctgtatgtgaggtactagctaatgtggg ttaaaaacacatctatttaaaggttttaatccttttt
quality values	Open. Hide. 41 20 10 20 58 58 38 9 36 58 58 58 58 58 47 37 58 58 62 62 62 62 32 22 62 47 36 62 49 56 47 23 16 12 10 18 13 16 20 16 20 26 26 32 50 31 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 31 28 62 62 62 59 59 62 62 62 62 62 59 56 44 46 28 32 56 59 62 59 59 46 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 47 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 48 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 52 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 52 58 49 58 58 58 49 58 58 54 58 58 58 58 58 58 58 58 58 58 58 42 42 58 58 54 45 58 58 54 54 54 58 58 54 58 58 54 52 58 58 58 54 54 54 54 54 54 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 52 58 58 53 58 58 58 58 51 42 58 58 46 47 50 58 58 52 58 58 54 58 58 41 51 58 58 49 49 51 58 58 50 49 49 50 47 58 58 58 58 58 58 54 50 37 51 51 53 53 58 58 58 58 58 58 58 58 58 50 58 50 52 53 50 54 58 49 52 52 53 50 51 58 51 49 53 54 58 52 58 54 58 51 58 53 43 51 50 40 43 58 58 53 51 39 58 50 58 52 58 58 58 51 58 52 52 58 49 58 52 50 58 58 58 51 37 54 49 58 41 58 30 51 58 58 52 58 42 51 51 52 54 42 54 52 54 38 51 42 50 25 52 49 32 54 28 35 34 52 32 47 49 50 44 49 39 33 53 30 53 37 42 34 47 54 54 53 52 39 20 5 42 33 32 53 45 52 37 52 31 42 42 34 41 54 54 33 32 54 54 54 53 53 41 53 53 42 40 49 31 40 52 52 53 45 32 31 52 52 42 33 36 33 45 31 35 45 52 31 32 45 40 45 53 29 53 52 33 28 31 34 49 32 40 34 31 34 23 51 51 42 31 42 30 33 26 33 32 51 30 24 45 36 51 31 30 26 30 36 31 38 32 41 37 31 15 36 12 32 31 33 31 33 28 31 43 43 21 33 23 31 48 42 33 32 24 34 27 30 35 31 32 32 31 46 46 31 22 29 27 20 19 31 31 25 32 29 30 44 48 48 35 15 41 20 26 31 31 31 31 25 33 21 31 22 31 31 31 31 31 34 31 31 31 26 32 32 26 25 21 32 38 19 33 18 29 44 31 26 31 34 24 25 32 19 42 48 31 29 14 26 19 16 38 24 31 17 35 14 15 30 24 32 48 48 17 15 9 22 21 23 27 30 18 43 18 9 9 20 29 23 32 24 30 27 32 32 31 17 26 25 15 10 14 11 32 14 28 37 19 13 29 32 18 25 39 23 16 21 17 26 17 6 8 8 28 20 14 22 27 28 26 15 9 27 13 14 18 20 7 12 34 11 27 19 13 14 7 11 28 16 26 12 22 21 12 31 4 11 9 16 20 23 13 9 7 28 18 17 24 24 17 18 14 7 10 28 6 18 8 16 13 14 15 28 8 8 8 16 6 19 18 14 14 15 5 12 12 20 8 7 6 4 9 16 8 3 2 6 20 18 26 28 14 3 4 8 20 6 8 5 24 30 22 12 12 23 7 4 17 22 8 11 10 10 4 3 1 3 3 3 6 17 10 21 6 10 23 6 6 19 7 17 26 18 9 4 3 4 8 5 16 10 11 2 6 10 17 8 17 12	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr6_50853528_50854647
seq2: B6Ng01-311O13.b_46_1151

seq1  GAATTCCAAACCTACAGCTTTCCAGATGAAATAAGAAACAGAAGTAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCTACAGCTTTCCAGATGAAATAAGAAACAGAAGTAATAA  50

seq1  ACAAAAAAGAGTGATTTCCAGTTTCCCATTATGGCCAACGACATCCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAGAGTGATTTCCAGTTTCCCATTATGGCCAACGACATCCTTAA  100

seq1  TTCCTTATTCTCTTTGCCCTGCCTATTCCTGTTCTCTCACTAGTCCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTCTCTTTGCCCTGCCTATTCCTGTTCTCTCACTAGTCCTTTG  150

seq1  GGGTCTGGAAGGAAGGCAGACCTCTTGTTCATCTCCAGGTATGCTACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGGAAGGAAGGCAGACCTCTTGTTCATCTCCAGGTATGCTACATT  200

seq1  TTATCCCCAGGGAATGTTTATGTACAGATACAACTAAATCGAGAAAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCCAGGGAATGTTTATGTACAGATACAACTAAATCGAGAAAACAG  250

seq1  GACTCTGTGCTTGGCAAGGGTCCTAGTGAGGCCTGAGTGTGGCCTGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGTGCTTGGCAAGGGTCCTAGTGAGGCCTGAGTGTGGCCTGGAGA  300

seq1  ACAGAGGGTGACATCACAAAGGAAATGTGTCCAGAAAAGAAAGGTTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGTGACATCACAAAGGAAATGTGTCCAGAAAAGAAAGGTTAGAA  350

seq1  AATAGTGGAACTGAATCCAAGGCTGATACGGAGCAAAAGCACCAGTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGGAACTGAATCCAAGGCTGATACGGAGCAAAAGCACCAGTGATG  400

seq1  TCCCGATGTCAGCACCCAGGCATTGCTGCATGGGGAACCACAGCATGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGATGTCAGCACCCAGGCATTGCTGCATGGGGAACCACAGCATGCTG  450

seq1  CTTTACCTGGCTTTCCTTTGCATGAAATGAGAGTGTCCCTGGATTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTGGCTTTCCTTTGCATGAAATGAGAGTGTCCCTGGATTGATTT  500

seq1  CAGGGTTGTAATGATTATATATAACCTCAGTGTAGAATAAGTATTGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGTAATGATTATATATAACCTCAGTGTAGAATAAGTATTGGTTC  550

seq1  CTCCTGCATTTCACTCAGTATTTTTTTTCATTACTTCTTGAAAGTTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCATTTCACTCAGTATTTTTTTTCATTACTTCTTGAAAGTTCCAG  600

seq1  TTCACATTAGTCCTCTGTTCACCAGCTCTAATGTGTGTGTGCGCATGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTAGTCCTCTGTTCACCAGCTCTAATGTGTGTGTGCGCATGTGC  650

seq1  ACATGAGTCCTGTTGTGTGTGGAGGTCAGAGATCAATCTCAGATGTCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGTCCTGTTGTGTGTGGAGGTCAGAGATCAATCTCAGATGTCACT  700

seq1  TCTCAGGAGCTGTCATCATTTTCCCCCTCTCTCCATCTCTATTTTGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGAGCTGTCATCATTTTCCCCCTCTCTCCATCTCTATTTTGCATA  750

seq1  CTCTTATGGTTTTGCTTTGTTGTTTTGAGATAGGGTCTTTCACTGGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGGTTTTGCTTTGTTGTTTTGAGATAGGGTCTTTCACTGGCTTA  800

seq1  GAGCTCAACATCAAGCCCTAGAATCTTGCCCCTGCTTCTCCAGAAAAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAACATCAAGCCCTAGAATCTTGCCCCTGCTTCTCCAGAAAAGGC  850

seq1  ATTACAAACATGCACCACCATGCCTGATTATTTCTGTGAGAAACAGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAACATGCACCACCATGCCTGATTATTTCTGTGAGAAACAGGTGT  900

seq1  AGAGGAATTTTAATCCAGTAAACATGTCTGCTCTGGCAGGAGAGCCCATC  950
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  AGAGGAATTTT-ATCCAGTAAACATGTCTGCTCTGGCA-GAGAGCCCATC  948

seq1  GAAAGTCCTAGGTCTATCTAATCCAGCCAGAATGAATTCATACACTGAAT  1000
      |||||||||| ||||||||||| ||||||| ||||| |||||||||| ||
seq2  GAAAGTCCTA-GTCTATCTAAT-CAGCCAG-ATGAA-TCATACACTG-AT  993

seq1  TACAGTATGATCTGGCT-GGAATACAAACACACCCTTAGTACACACCTTT  1049
      ||||||||||||||||| |||||||||||||| |||||||||||  | ||
seq2  TACAGTATGATCTGGCTGGGAATACAAACACA-CCTTAGTACACCACCTT  1042

seq1  AATCCCCAACAATGAAAAGCTTAGTTTGTAGAAGGAACCTGCCATGCTTG  1099
      |||||||||| ||| ||||| ||||||||||| |  ||||| ||||| ||
seq2  AATCCCCAAC-ATGGAAAGC-TAGTTTGTAGACG--ACCTG-CATGCCTG  1087

seq1  AAAATAATGTCTAATTGAGGG  1120
       ||||| ||||| ||||||||
seq2  -AAATATTGTCT-ATTGAGGG  1106

seq1: chr6_50939763_50940763
seq2: B6Ng01-311O13.g_66_1052 (reverse)

seq1  AAAAAGAGATTAAAAACTTTAAATAGATGTGTTTTTAAACCCCAACATTA  50
      |||||| |||||||| ||||||||||||||||||||||   || ||||||
seq2  AAAAAG-GATTAAAACCTTTAAATAGATGTGTTTTTAA---CCCACATTA  46

seq1  GCTAGTACCCTCAACATACAGGGCATGAAATG-CAAAGTCCTTCATGGCC  99
      ||||||| |||| ||||||||||||||||||| ||||||||||||||  |
seq2  GCTAGTA-CCTC-ACATACAGGGCATGAAATGCCAAAGTCCTTCATG--C  92

seq1  ATACCCGCTTCTCCAAACACAACTTGAATTCCCACGCAGTAGTTTCTTGC  149
      |||||||||||||| |||||||| |||| |||||||||||||||||||||
seq2  ATACCCGCTTCTCC-AACACAACCTGAA-TCCCACGCAGTAGTTTCTTGC  140

seq1  ATGTGCTAAAACAAACAAACAAACAAACAAACTCCTTGGTCAAGCCTCCT  199
      ||||||| ||||||||||||||||||   |||| ||||||||||||||||
seq2  ATGTGCT-AAACAAACAAACAAACAA--CAACTTCTTGGTCAAGCCTCCT  187

seq1  CCTCCTCCTTCCTTGTGTTGTTTGTGTGTCACATGTTCCCCCATGCCTCT  249
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCT-CTCCTTCCTTGTGTTG-TTGTGTGTCACATGTTCCCCCATGCCTCT  235

seq1  TCTGAAGGCTGTCTCCTCAGCAGCTGCCCTGGAGACTCTCGGCTCCCACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGCTGTCTCCTCAGCAGCTGCCCTGGAGACTCTCGGCTCCCACA  285

seq1  AGCTGCTGCCCACACGCTTCTTGCTGCACTGGTAGCTTGTGCTTTCTCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGCCCACACGCTTCTTGCTGCACTGGTAGCTTGTGCTTTCTCAT  335

seq1  CTGAGTCCCCACCACCGTCAGCTCCTCAGAGTCAGACACAATGACTTACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCCCACCACCGTCAGCTCCTCAGAGTCAGACACAATGACTTACC  385

seq1  GTGTCCAGTGCACAGCCTCTGACATGATAGGTGATTAAGAAATGTTAAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAGTGCACAGCCTCTGACATGATAGGTGATTAAGAAATGTTAAGC  435

seq1  GAATGAATAACTATTGGGCCTTTCATCACTACATAGTTGCTGAATTAACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATAACTATTGGGCCTTTCATCACTACATAGTTGCTGAATTAACT  485

seq1  GAGTGACAAAATCAGTGGGGATATCACTTGGTAAACTTGGCTCCTGCTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACAAAATCAGTGGGGATATCACTTGGTAAACTTGGCTCCTGCTTT  535

seq1  CTTCCCTCTGTGGTTGATTTAAGTAGTACCTTCTATGCACCCATCACTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCTGTGGTTGATTTAAGTAGTACCTTCTATGCACCCATCACTGT  585

seq1  TCTGGATTCTAAGAATCCAGAGCTACATAAGGTGTAGTCTCTTCCTTGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTCTAAGAATCCAGAGCTACATAAGGTGTAGTCTCTTCCTTGTT  635

seq1  GAAGAGTCTACACCTAGCTGAAGCCACATGCCCACTGACCAACTGACTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCTACACCTAGCTGAAGCCACATGCCCACTGACCAACTGACTTC  685

seq1  CTTTCTCTTCACCCTAATTCTATCAACGCTATCCCTTCCCTCAAATCCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTCACCCTAATTCTATCAACGCTATCCCTTCCCTCAAATCCAA  735

seq1  AGTACACGCTGCCCATCACACATCCCTTTCCCTGACCTGCCTCCATCCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACGCTGCCCATCACACATCCCTTTCCCTGACCTGCCTCCATCCTT  785

seq1  TCTGGGGGAAGATCTTACTGAGGGCAGTGCTGTCAGGATATGCTTCGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGGAAGATCTTACTGAGGGCAGTGCTGTCAGGATATGCTTCGCCA  835

seq1  GTTATCTTCTCCATTCTACCGCTGGGACTACATTAAAGCAGCACTCACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTTCTCCATTCTACCGCTGGGACTACATTAAAGCAGCACTCACTG  885

seq1  TAACTCCTTGCTTGCTCTCCCTGTGTCCATCCCTGCCTTTTACAATTCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCTTGCTTGCTCTCCCTGTGTCCATCCCTGCCTTTTACAATTCAT  935

seq1  CGTCTCCATAGTCACCTGAAAGAATCTTTTTGGCCGTGGCAACAAAGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCATAGTCACCTGAAAGAATCTTTTTGGCCGTGGCAACAAAGAAT  985

seq1  TC  1001
      ||
seq2  TC  987

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information