tttgtttaactctgtaccccatttttaaataaggttatttggatttctgt
agtctaacttcttgagttctttgtgtatattgtggatgccaacaaaagct
tgctgacagaagcctgatatagctgtcttctgagaggctttgccagtgcc
ccaaaatacagaagtggaggctcacaggcatccattggactgagcacagg
ctcctcaatgaaggagctagagaaattacccaaggggctgaaggagggtt
tgcagccctgtaggagagacaacaatatgagctaaccagtatccccagag
ctccctgggactaaatccctgggactcatggctctagctgcatatgtagc
agagaatggcctagtcagtcgtcaatgggaggagaggcccttgatcctat
gaaggttctatgcctcagtaaagggggttgccagggccaggaagcaggag
tgggtggactggtgagtggggggaggga

gaattctcttaattcttcccaatatccctgtctgtaagagctattgtatt
gaacttttccaagataattcacctaaggggaaccagatacaggaaaaagc
aatacacaatttagaacttcttttggaaaataggtgacaaattaacgtat
atattcatcccattcttggatataccaaagtgtaatttcaaagatattta
acttttgtttttgctaaaattagctacctgcacaattgacctgcagctac
ctctgcaccaggaagcacttcatgatgttgctttcaaactgcattaacac
acaggatatgaagcataaagttgtcatacatctcttcaaaacactgaagc
attcaaagtttagatgtacaagagggaacaaactcattaaaatgttattt
aatacataaatacaaatggaacttgtagcaatattgagttttctaaataa
atctcatgtatatgagaagtctctagctcacagtcttatagataaaataa
gttaaaaattcacaacctaaaaaataatgtaagaaagcttcaataacacc
atttttccaaaggatctccatggaaacataccacaaggtagtaattaatt
tgagttttgagagttaattgaaactagagactgatctgaaaataaagtca
atataaaggatgttggagcatctttctacaaaaccagaaagaaatatctg
tctctcatgattggcattttaatcatagacagagaaacttaggggtttct
cagacagatattaaaaaaaaaaaaaaaacccacggaaatctggaaatact
gatttctagcatgcatgctgttgattctcattaagaaaaagttctcttta
catgtcattccaaaatttctgtggcctggagaagtgtatgatttcccttt
tcgatcagaatcctggagatgtaaatatccatctacttacagcatcagaa
gaaatctagtctaagaaaaatgaaactacttaaactaatatctacaacag
ctaaacatcaataaaaaacaaacttttctggtattggaggaaaatgtgaa
tattctccaagatacaaacattgacttaagcttactttcctctgaagatc
aaggtaagtaagaattcggcttctgtgcttgcctgtctatccagcgctta
catggta

seq1: chr6_27345957_27347106
seq2: B6Ng01-312E22.g_64_1220

seq1  GAATTCTCTTAATTCTTCCCAATATCCCTGTCTGTAAGAGCTATTGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATTCTTCCCAATATCCCTGTCTGTAAGAGCTATTGTATT  50

seq1  GAACTTTTCCAAGATAATTCACCTAAGGGGAACCAGATACAGGAAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTCCAAGATAATTCACCTAAGGGGAACCAGATACAGGAAAAAGC  100

seq1  AATACACAATTTAGAACTTCTTTTGGAAAATAGGTGACAAATTAACGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACAATTTAGAACTTCTTTTGGAAAATAGGTGACAAATTAACGTAT  150

seq1  ATATTCATCCCATTCTTGGATATACCAAAGTGTAATTTCAAAGATATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATCCCATTCTTGGATATACCAAAGTGTAATTTCAAAGATATTTA  200

seq1  ACTTTTGTTTTTGCTAAAATTAGCTACCTGCACAATTGACCTGCAGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTTTTTGCTAAAATTAGCTACCTGCACAATTGACCTGCAGCTAC  250

seq1  CTCTGCACCAGGAAGCACTTCATGATGTTGCTTTCAAACTGCATTAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACCAGGAAGCACTTCATGATGTTGCTTTCAAACTGCATTAACAC  300

seq1  ACAGGATATGAAGCATAAAGTTGTCATACATCTCTTCAAAACACTGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATATGAAGCATAAAGTTGTCATACATCTCTTCAAAACACTGAAGC  350

seq1  ATTCAAAGTTTAGATGTACAAGAGGGAACAAACTCATTAAAATGTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGTTTAGATGTACAAGAGGGAACAAACTCATTAAAATGTTATTT  400

seq1  AATACATAAATACAAATGGAACTTGTAGCAATATTGAGTTTTCTAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAAATACAAATGGAACTTGTAGCAATATTGAGTTTTCTAAATAA  450

seq1  ATCTCATGTATATGAGAAGTCTCTAGCTCACAGTCTTATAGATAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGTATATGAGAAGTCTCTAGCTCACAGTCTTATAGATAAAATAA  500

seq1  GTTAAAAATTCACAACCTAAAAAATAATGTAAGAAAGCTTCAATAACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAATTCACAACCTAAAAAATAATGTAAGAAAGCTTCAATAACACC  550

seq1  ATTTTTCCAAAGGATCTCCATGGAAACATACCACAAGGTAGTAATTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCAAAGGATCTCCATGGAAACATACCACAAGGTAGTAATTAATT  600

seq1  TGAGTTTTGAGAGTTAATTGAAACTAGAGACTGATCTGAAAATAAAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTGAGAGTTAATTGAAACTAGAGACTGATCTGAAAATAAAGTCA  650

seq1  ATATAAAGGATGTTGGAGCATCTTTCTACAAAACCAGAAAGAAATATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGGATGTTGGAGCATCTTTCTACAAAACCAGAAAGAAATATCTG  700

seq1  TCTCTCATGATTGGCATTTTAATCATAGACAGAGAAACTTA-GGGTTTCT  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCTCATGATTGGCATTTTAATCATAGACAGAGAAACTTAGGGGTTTCT  750

seq1  CAGACAGATATT--AAAAAAAAAAAAAACCCACGGAAATCTGGAAATACT  797
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  CAGACAGATATTAAAAAAAAAAAAAAAACCCACGGAAATCTGGAAATACT  800

seq1  GATTTCTAGCATGCATGCTGTTGATTCTCATTAAGAAAAAGTTCTCTTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTAGCATGCATGCTGTTGATTCTCATTAAGAAAAAGTTCTCTTTA  850

seq1  CATGTCATTCCAAAATTTCTGTGGCCTGGAGAAGTGTATGATTTCCC-TT  896
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATGTCATTCCAAAATTTCTGTGGCCTGGAGAAGTGTATGATTTCCCTTT  900

seq1  TCGATCAGAATCCTGGAGATGTAAATATCCATCTACTTACAGCATCAGAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCAGAATCCTGGAGATGTAAATATCCATCTACTTACAGCATCAGAA  950

seq1  GAAATCTAGTCTAAG-AAAATGAAACTACTTAAACTAATATCTACAAACA  995
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  GAAATCTAGTCTAAGAAAAATGAAACTACTTAAACTAATATCTAC-AACA  999

seq1  GCTAAACAATCAAT-AAAAACAAACTTTCTGGGTATTGGAGGAAAATGTG  1044
      ||||||| |||||| |||||||||||||   |||||||||||||||||||
seq2  GCTAAAC-ATCAATAAAAAACAAACTTTTCTGGTATTGGAGGAAAATGTG  1048

seq1  -ATATTCTCCAAGATACAAACATTTGACTTAAGC-TACTT--CTCTGAGA  1090
       ||||||||||||||||||||| ||||||||||| |||||  ||||||  
seq2  AATATTCTCCAAGATACAAACA-TTGACTTAAGCTTACTTTCCTCTGAAG  1097

seq1  TTCCAAAAGTAGGTTAAGATTCTGCTTCTGTGCTTTGCTGTCTAT-CAGC  1139
       ||  || ||| || |  |||| ||||||||||||  |||||||| ||||
seq2  ATC--AAGGTAAGTAAGAATTCGGCTTCTGTGCTTGCCTGTCTATCCAGC  1145

seq1  GC-TACATGGTA  1150
      || |||||||||
seq2  GCTTACATGGTA  1157