BAC Information

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BAC

Clone NameB6Ng01-313M15
Chromosome6 (Build37)
Map Location 60,238,213 - 60,239,044
singlet/doubletsinglet
Overlap genenone
Upstream geneGprin3, EG634166, EG627108, EG434019, LOC671300, EG627178, LOC100041706
Downstream geneLOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1, LOC100041756, LOC100041764
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313M15.bB6Ng01-313M15.g
ACCGA104902GA104903
length1,309960
definitionB6Ng01-313M15.b B6Ng01-313M15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaacaccatctgatccttctacaaaaggctatactcaataaaa
ctggaaaacctggacgaaatggacaaatttctggacagataacaggtacc
aaagttgaatcaggatcaacttgaccatctaaacagtcccatatccgcta
aagaaatagaagcagttattaatagtctcccagccaaaaaaaagcccagg
accagacagatttagtgcagagttctatcagaccttcaaagaagacctaa
ttccagttcttcataaactattccacaaaatagaaacggaaggtactcta
cccaactcattctatgaagccacaattactctgatacctaaaccaaaaaa
aagacccaacaaagatagagaacttcagaccaatttcccttatgaatatc
gatgcaaaaatcctcaataaaattcttgctaacagaatccaagaacacat
caaaacaatcatccatcctgaccaagtagggttcatcccaaggatgcagg
aatggttcaatatacggaaatcaatcaacataatccagtatataaacaaa
ctcaaaaacaaaaaccacatgatcatctcgttagatgctgagaaagcatt
tgacaaaatccaacacccattcatgataaaagttttggaaagatcaggaa
ttcaaggcccacacctaaacatgataaaagcaatctacagcaaaccaata
gccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaaatc
agggactagacaaggctgtccactctcgacctacctattcaacattgtac
ttgaactcctagccagagcaattagacaacaaaaggagatgaaggggata
caaattggaaaggaaggagtcaaaatatcacttttttgcagatgatatga
tacttatatataattgacccttaaaaattccaccagagaactcataatcc
tgataaacagcttccagtgaagtagctggatataaaatttaactcaaaca
agtcaatgggccttttcttgtacatcaaaggaataaacaagctgaagaaa
gaaattagggaaacaaccacccttctcaataatcacaaaactgaataata
aataacctggcggaactctaactcataggagtgaaagatctgtatgaata
gaaaccttcaggtctcttaaagaaagttgttaaagaaagatctctagaaa
gatgaagaatttccattgtctcttgcattgccgattcacactttgtaatg
gtctacttggctaagacaaaatctctacgaatattctatgtgccattcgc
ttcatcttg
gaattcaacagaagcattcactgatttcttacagagattatgttaaatca
taaatacagcagtacctgaaaccagtcattgataggaatgttggcctcta
gaatattgaatgtttccaatattatccccaaagccccctacacccccctg
tcctgctccacaacccacccactcccacttcctgaccctggcattttagc
atttgaaaagtaaatgaagaaaatatctaataaaaaaaaagaaaattaac
ttggaatgaaattaactagaatttgttatataacttgaagtgttaaaaag
aaatttgtttaaaaaaaaagaaaaagaaaaaaagaaatgctgaatgtaag
acttcaatcagactattgaaaggatgtggaattgaataaatgaatgtata
agaaaaaatactggtattgtttttaaagagcatcatgctaatatcatagg
aaaagccttagctgaaagtcatagaaatcaaaatgcccaatcttttcatt
tgttgtggctttggtctctttcaaagggattatgaggccagaatgttcaa
accacaaaaatagctagtatactcaatatagagaatattttgtttataga
agaaaacaggcaggttatggttgttatggaccacaaacttttccagtgta
ttgtatgcactgtggaaagggcaagtatttgtcaaaagattgatcgtcca
agagagacatgtaaggtaacctgttgtccttgggaaacaaaagtgaggcc
tgtcagctcaaggaaccacaataaaaataaaacagcctttcctttggtca
gctataaagttgaaagcaggtaaagaaaatcaaatgttaatatttcttga
tcatattcattctacttgaaagggagtgcatctacagatctggccataat
atgcctttttacaagattcccaaaaagttgaatgttacaaacttttcaac
tggtatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_60238213_60239044
seq2: B6Ng01-313M15.g_71_904

seq1  GAATTCAACAGAAGCATTCACTGATTTCTTACAGAGATTATGTTAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGAAGCATTCACTGATTTCTTACAGAGATTATGTTAAATCA  50

seq1  TAAATACAGCAGTACCTGAAACCAGTCATTGATAGGAATGTTGGCCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACAGCAGTACCTGAAACCAGTCATTGATAGGAATGTTGGCCTCTA  100

seq1  GAATATTGAATGTTTCCAATATTATCCCCAAAGCCCCCTACACCCCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGAATGTTTCCAATATTATCCCCAAAGCCCCCTACACCCCCCTG  150

seq1  TCCTGCTCCACAACCCACCCACTCCCACTTCCTGACCCTGGCATTTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCCACAACCCACCCACTCCCACTTCCTGACCCTGGCATTTTAGC  200

seq1  ATTTGAAAAGTAAATGAAGAAAATATCTAATAAAAAAAAAGAAAATTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAAAGTAAATGAAGAAAATATCTAATAAAAAAAAAGAAAATTAAC  250

seq1  TTGGAATGAAATTAACTAGAATTTGTTATATAACTTGAAGTGTTAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGAAATTAACTAGAATTTGTTATATAACTTGAAGTGTTAAAAAG  300

seq1  AAATTTGTTTAAAAAAAAAGAAAAAGAAAAAAAGAAATGCTGAATGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTTTAAAAAAAAAGAAAAAGAAAAAAAGAAATGCTGAATGTAAG  350

seq1  ACTTCAATCAGACTATTGAAAGGATGTGGAATTGAATAAATGAATGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATCAGACTATTGAAAGGATGTGGAATTGAATAAATGAATGTATA  400

seq1  AGAAAAAATACTGGTATTGTTTTTAAAGAGCATCATGCTAATATCATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAATACTGGTATTGTTTTTAAAGAGCATCATGCTAATATCATAGG  450

seq1  AAAAGCCTTAGCTGAAAGTCATAGAAATCAAAATGCCCAATCTTTTCA-T  499
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAAGCCTTAGCTGAAAGTCATAGAAATCAAAATGCCCAATCTTTTCATT  500

seq1  TGTTGTGGCTTTGGTCTCTTTCAAAGGGATTATGAGGCCAGAATGTTCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGCTTTGGTCTCTTTCAAAGGGATTATGAGGCCAGAATGTTCAA  550

seq1  ACCACAAAAATAGCTAGTATACTCAATATAGAGAATATTTTGTTTATAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAAATAGCTAGTATACTCAATATAGAGAATATTTTGTTTATAGA  600

seq1  AGAAAACAGGCAGGTTATGGTTGTTATGGACCACAAACTTTTCCAGTGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGGCAGGTTATGGTTGTTATGGACCACAAACTTTTCCAGTGTA  650

seq1  TTGTATGCACTGTGGAAAGGGCAAGTATTTGTCAAAAGATTGATCGTCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGCACTGTGGAAAGGGCAAGTATTTGTCAAAAGATTGATCGTCCA  700

seq1  AGAGAGACATGTAAGGTAACCTGTTGTCCTTGGGAAACAAAAGTGAGGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACATGTAAGGTAACCTGTTGTCCTTGGGAAACAAAAGTGAGGCC  750

seq1  TGTCAGCTCAAGGAACCACAATTAAAAATAAAACAGCC-TTCCTTTGGTC  798
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  TGTCAGCTCAAGGAACCACAA-TAAAAATAAAACAGCCTTTCCTTTGGTC  799

seq1  AGCTATAAAGTTGAAAGCAGGT-AAGAAAATCAAA  832
      |||||||||||||||||||||| ||||||||||||
seq2  AGCTATAAAGTTGAAAGCAGGTAAAGAAAATCAAA  834