BAC Information

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BAC

Clone NameB6Ng01-313O07
Chromosome6 (Build37)
Map Location 45,267,127 - 45,268,297
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneLOC100040210
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313O07.bB6Ng01-313O07.g
ACCGA104979GA104980
length1,1701,180
definitionB6Ng01-313O07.b B6Ng01-313O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaaaatatttctcataaatataatcttatctatgatctaaa
atggcataaaatttaatatatgaatatgtgtattaatgtttaatgtagca
catggtatatatctattactattataaacatatgtagagatgaattttta
aagatgagtttttcttagaagaagttgatttgccataaaatatgtcttta
tgtaatgagatttctaaatttattttaggtagatattgcacttagaccct
taattaaggaatatgtgttcatttcatatcagcaatatctacgataaaca
tttgaattgccaacagttttattgatgttgtattatgtggaatgtcatca
aaatgctgaattttaacctgtatttcagctgttcctctgtattcaagcta
gtttcagtatgaatttcacaattgttaagcctgcactctctgtgtaccaa
aggggttagagtaactccacccatgcctagtccaggcatcagataattaa
cagagagcatccgtaagcagatagttactatcctttatattgtcttaaat
taagaagcaaacccatgagtgcggtttaatcatgcgagaaagaaacctgt
ctggaaaagtaattactcccattaagttaatgcattgtcaagtctgaaag
tttgtagcactcttagctccagaattgttttttttttttttttttttttt
tttactgcttaaacttaaacaaatcttcttagttaaaaccaggcttctat
gtggtcaccttgacaatataaaaatgcacaagagatttggggtggggaaa
atattcaattttcttgacaaaatgaaagctctatcatttaaaactttgga
aacattaacagttaaaagaaggtttaatgtttaattaaattctttggcta
attcatgtattcagttcttcaaattaattactaaatgtatctctgaaccc
tctagattataaacattatatttagttttcagtattttctttgtatgaat
acctaaagaaaatatttttattaattttagctaatgtgaaattaatgaac
cacataatattttaatgtatctgtgccttatgaaacattatgtgtatttc
agttatgaatatagtcagcttaagacatactatttttcattccaggtcaa
gctattaaaatgtttgaaaa

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataattgccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatgggatcatagggctccc
aatggaggagctagagaaagtagccaggagctaaagggatctgcaaccct
atagtgacacattatgagctaccagtaccccggagctctgactcttagct
gcatatatatcaaaagatggctagtcgccatcactgcaagagaggtccta
tgaactgcactttatatgccaagtacggattaccaggccaatggatgctt
gcacaggacatgtgcgttgatcactacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_45267127_45268297
seq2: B6Ng01-313O07.b_46_1215

seq1  GAATTCAGTAAAAATATTTCTCATAAATATAATCTTATCTATGATCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAAAATATTTCTCATAAATATAATCTTATCTATGATCTAAA  50

seq1  ATGGCATAAAATTTAATATATGAATATGTGTATTAATGTTTAATGTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATAAAATTTAATATATGAATATGTGTATTAATGTTTAATGTAGCA  100

seq1  CATGGTATATATCTATTACTATTATAAACATATGTAGAGATGAATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTATATATCTATTACTATTATAAACATATGTAGAGATGAATTTTTA  150

seq1  AAGATGAGTTTTTCTTAGAAGAAGTTGATTTGCCATAAAATATGTCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGTTTTTCTTAGAAGAAGTTGATTTGCCATAAAATATGTCTTTA  200

seq1  TGTAATGAGATTTCTAAATTTATTTTAGGTAGATATTGCACTTAGACCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAGATTTCTAAATTTATTTTAGGTAGATATTGCACTTAGACCCT  250

seq1  TAATTAAGGAATATGTGTTCATTTCATATCAGCAATATCTACGATAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGGAATATGTGTTCATTTCATATCAGCAATATCTACGATAAACA  300

seq1  TTTGAATTGCCAACAGTTTTATTGATGTTGTATTATGTGGAATGTCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTGCCAACAGTTTTATTGATGTTGTATTATGTGGAATGTCATCA  350

seq1  AAATGCTGAATTTTAACCTGTATTTCAGCTGTTCCTCTGTATTCAAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGAATTTTAACCTGTATTTCAGCTGTTCCTCTGTATTCAAGCTA  400

seq1  GTTTCAGTATGAATTTCACAATTGTTAAGCCTGCACTCTCTGTGTACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGTATGAATTTCACAATTGTTAAGCCTGCACTCTCTGTGTACCAA  450

seq1  AGGGGTTAGAGTAACTCCACCCATGCCTAGTCCAGGCATCAGATAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTAGAGTAACTCCACCCATGCCTAGTCCAGGCATCAGATAATTAA  500

seq1  CAGAGAGCATCCGTAAGCAGATAGTTACTATCCTTTATATTGTCTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCATCCGTAAGCAGATAGTTACTATCCTTTATATTGTCTTAAAT  550

seq1  TAAGAAGCAAACCCATGAGTGCGGTTTAATCATGCGAGAAAGAAACCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGCAAACCCATGAGTGCGGTTTAATCATGCGAGAAAGAAACCTGT  600

seq1  CTGGAAAAGTAATTACTCCCATTAAGTTAATGCATTGTCAAGTCTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAAGTAATTACTCCCATTAAGTTAATGCATTGTCAAGTCTGAAAG  650

seq1  TTTGTAGCACTCTTAGCTCCAGAATTGTTTTTTTTTTTTTTTTTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCACTCTTAGCTCCAGAATTGTTTTTTTTTTTTTTTTTTTTTTT  700

seq1  TTTACAACTTAAACTTAAACAAATCTTCTTAGTTAAAACCAGGCTTCTAT  750
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGCTTAAACTTAAACAAATCTTCTTAGTTAAAACCAGGCTTCTAT  750

seq1  GTGGTCACCTTGACAATATAAAAATGCACAAGAGATTTGGG--TGGGAAA  798
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  GTGGTCACCTTGACAATATAAAAATGCACAAGAGATTTGGGGTGGGGAAA  800

seq1  ATATTCAA-TTTCTTGACAAAATGAAAGCTCTATCATTTAAAACTTTGGA  847
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAATTTTCTTGACAAAATGAAAGCTCTATCATTTAAAACTTTGGA  850

seq1  AACATTAACAGTTAAAAAGAAGGTTTAATGTTTAATTAAATTCTTTGGCT  897
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AACATTAACAGTT-AAAAGAAGGTTTAATGTTTAATTAAATTCTTTGGCT  899

seq1  AATTCATGTATTCAGTTCTTCAAATTAATTACTAAAATGTATCTCTGAAC  947
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATTCATGTATTCAGTTCTTCAAATTAATTACT-AAATGTATCTCTGAAC  948

seq1  CCTCTAGATTATAAACA-TATATTTAGTTTTCAGTATTTTCTTTGTATGA  996
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTCTAGATTATAAACATTATATTTAGTTTTCAGTATTTTCTTTGTATGA  998

seq1  ATACCTAAAG-AAATA-TTTTATTAATTTTTTCTAATGTGAAATTAATG-  1043
      |||||||||| ||||| |||||||||||||  ||||||||||||||||| 
seq2  ATACCTAAAGAAAATATTTTTATTAATTTTAGCTAATGTGAAATTAATGA  1048

seq1  ATCACATAATATTTTAATGTATCTGGTTGGCTTATG-AACATTATGTGTA  1092
      | |||||||||||||||||||||||  || |||||| |||||||||||||
seq2  ACCACATAATATTTTAATGTATCTG--TGCCTTATGAAACATTATGTGTA  1096

seq1  TTTTTCAGTTATG-ATATAGTCAGCTTAAGCAATTCATATTTTCATTTCA  1141
        ||||||||||| ||||||||||||||||  || |   |||||||| ||
seq2  --TTTCAGTTATGAATATAGTCAGCTTAAGACATACTATTTTTCATTCCA  1144

seq1  GTTACAAGGCTATTAAATTGTTTTGGAAAA  1171
      | | ||| ||||||||| |||||  |||||
seq2  GGT-CAA-GCTATTAAAATGTTT--GAAAA  1170


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