BAC Information

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BAC

Clone NameB6Ng01-315H17
Chromosome6 (Build37)
Map Location 67,956,850 - 67,957,916
singlet/doubletsinglet
Overlap geneIgk
Upstream geneGng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318, Serbp1, Il12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144
Downstream geneIgkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315H17.bB6Ng01-315H17.g
ACCGA106122GA106123
length4471,057
definitionB6Ng01-315H17.b B6Ng01-315H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcacctgaggaataccgaatggcagagaagcacctgaaaaaatgttcaac
atccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacc
tcacaccagtcagaatggctaagatcaaaaattcaggtgacagccgatgc
tggtgaggatgtggagaaagaggaacactcctccattgttggtggcattg
caagcttgtacaaccactctggaaatcagtctggcagttacttagaaaat
tggacatagtactaccgcaggattcagcaatacctctcctgggcatatat
ccagaagatgtcccaaccggtaagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacagaaaatgtggtacatttacacaatggag
gaattcacacaacagccatttcatttcagcatgatgtgactgataactgt
tgtaaaattttgatgcaagggttttgcttttgagaaaatttactgaagtt
tattgtgaaatgtaaaagctgagactggacagaattttcctcttttgatg
tgttgggacatgaaaacaattgtgctgtacctccttattactggagaagg
aggaaaataaggaagtgtcaagagtggagtggagtggataggaagtaact
ttttctgcttatctttaaggaaatctttataaagaaacataggtatgttt
ggggagaaatgaagatttataaaatattatttaaaggtaatggtaaaaag
taataactatttgtggatgaatggcattttctttcctttttcagattagg
aggggcaacttaatttcaaacaagaagatatttataaaactttttattag
acatatacagaaacacattgttataatccttttgtcaataacctgaggtt
tttaaggtacatatgacttaaaattgacatggcagtttcagtatcttcag
aataagtgaaagcattgttgagtttaggcaataaactcctgtgttcattg
tggagcatttctatgacaataattaatgaaatggaaatttcaggatattc
tatacaagtctacataaagaaagtacaattggaaatactatgaataaagc
cgatgacaggctatcttttacaattgaaatggaaaggtttttctacggta
aagcactgaaacatatcactacatacagactggtttggaactcctgagcc
tcctccttttatattccagatgtcaggattataaacatgcactgaatcat
gtattttcttaatgaaacactattatttttacatttattgttttacattt
atttacacagtacttccccacagccatcagaagcctttcctacactatcc
ctttcttttactctaactctagaaagaggagtcccccacttggatacagt
tcactctggcaacctagtcacttgcaagatagccacaatcttttccacta
gacaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_67956850_67957916
seq2: B6Ng01-315H17.g_64_1120 (reverse)

seq1  TCTTGTCTTAGTGGAAAAGGATGTGCCTAATCTTGC-AGTGACTTGGGTG  49
      ||||||| |||||||||||  |||| || ||||||| |||||| | ||| 
seq2  TCTTGTC-TAGTGGAAAAGATTGTGGCT-ATCTTGCAAGTGAC-TAGGTT  47

seq1  GCCAGAGTGAACTGGTATCCAAGGTGGGGGGAACTCCTCTTTCTTAGAGT  99
      ||||||||||||| |||||||| |||||||  ||||||||||| ||||||
seq2  GCCAGAGTGAACT-GTATCCAA-GTGGGGG--ACTCCTCTTTC-TAGAGT  92

seq1  TAGAGGTAAAAGAAAGGGATAGTGTAGGGAAAGGCCTTCTGATGGCTGTG  149
      |||| ||||||||||||||||||||| ||||||| |||||||||||||||
seq2  TAGA-GTAAAAGAAAGGGATAGTGTA-GGAAAGG-CTTCTGATGGCTGTG  139

seq1  GGGAAGTACTGTGTAAATAAATGTAAAACAATAAATGTAAAAATAATAGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTACTGTGTAAATAAATGTAAAACAATAAATGTAAAAATAATAGT  189

seq1  GTTTCATTAAGAAAATACATGATTCAGTGCATGTTTATAATCCTGACATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTAAGAAAATACATGATTCAGTGCATGTTTATAATCCTGACATC  239

seq1  TGGAATATAAAAGGAGGAGGCTCAGGAGTTCCAAACCAGTCTGTATGTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATAAAAGGAGGAGGCTCAGGAGTTCCAAACCAGTCTGTATGTAG  289

seq1  TGATATGTTTCAGTGCTTTACCGTAGAAAAACCTTTCCATTTCAATTGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGTTTCAGTGCTTTACCGTAGAAAAACCTTTCCATTTCAATTGTA  339

seq1  AAAGATAGCCTGTCATCGGCTTTATTCATAGTATTTCCAATTGTACTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGCCTGTCATCGGCTTTATTCATAGTATTTCCAATTGTACTTTC  389

seq1  TTTATGTAGACTTGTATAGAATATCCTGAAATTTCCATTTCATTAATTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAGACTTGTATAGAATATCCTGAAATTTCCATTTCATTAATTAT  439

seq1  TGTCATAGAAATGCTCCACAATGAACACAGGAGTTTATTGCCTAAACTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAGAAATGCTCCACAATGAACACAGGAGTTTATTGCCTAAACTCA  489

seq1  ACAATGCTTTCACTTATTCTGAAGATACTGAAACTGCCATGTCAATTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTTTCACTTATTCTGAAGATACTGAAACTGCCATGTCAATTTTA  539

seq1  AGTCATATGTACCTTAAAAACCTCAGGTTATTGACAAAAGGATTATAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATATGTACCTTAAAAACCTCAGGTTATTGACAAAAGGATTATAACA  589

seq1  ATGTGTTTCTGTATATGTCTAATAAAAAGTTTTATAAATATCTTCTTGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTCTGTATATGTCTAATAAAAAGTTTTATAAATATCTTCTTGTT  639

seq1  TGAAATTAAGTTGCCCCTCCTAATCTGAAAAAGGAAAGAAAATGCCATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAGTTGCCCCTCCTAATCTGAAAAAGGAAAGAAAATGCCATTC  689

seq1  ATCCACAAATAGTTATTACTTTTTACCATTACCTTTAAATAATATTTTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAAATAGTTATTACTTTTTACCATTACCTTTAAATAATATTTTAT  739

seq1  AAATCTTCATTTCTCCCCAAACATACCTATGTTTCTTTATAAAGATTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTCATTTCTCCCCAAACATACCTATGTTTCTTTATAAAGATTTCC  789

seq1  TTAAAGATAAGCAGAAAAAGTTACTTCCTATCCACTCCACTCCACTCTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATAAGCAGAAAAAGTTACTTCCTATCCACTCCACTCCACTCTTG  839

seq1  ACACTTCCTTATTTTCCTCCTTCTCCAGTAATAAGGAGGTACAGCACAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCCTTATTTTCCTCCTTCTCCAGTAATAAGGAGGTACAGCACAAT  889

seq1  TGTTTTCATGTCCCAACACATCAAAAGAGGAAAATTCTGTCCAGTCTCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATGTCCCAACACATCAAAAGAGGAAAATTCTGTCCAGTCTCAG  939

seq1  CTTTTACATTTCACAATAAACTTCAGTAAATTTTCTCAAAAGCAAAACCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACATTTCACAATAAACTTCAGTAAATTTTCTCAAAAGCAAAACCC  989

seq1  TTGCATCAAAATTTTACAACAGTTATCAGTCACATCATGCTGAAATGAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCAAAATTTTACAACAGTTATCAGTCACATCATGCTGAAATGAAA  1039

seq1  TGGCTGTTGTGTGAATTC  1067
      ||||||||||||||||||
seq2  TGGCTGTTGTGTGAATTC  1057