BAC Information

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BAC

Clone NameB6Ng01-315L07
Chromosome6 (Build37)
Map Location 25,457,747 - 25,596,422
singlet/doubletdoublet
Overlap genenone
Upstream geneIqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
Downstream geneGpr37, Pot1a, EG626912, LOC100041210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315L07.bB6Ng01-315L07.g
ACCGA106281GA106282
length4441,054
definitionB6Ng01-315L07.b B6Ng01-315L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,457,747 - 25,458,197)(25,595,351 - 25,596,422)
sequence
actgaagcatatggacttcaaataaaaaaaatatttcttttttttttttt
ttattcaatatatgtgggactttatttgctgaggttttttttcttttttt
ttcccaattttttcaattaggtatttacttcatttatatttcaaatgcta
tcctgaaagacccctatattgcccccctcccccactcccctacccaccca
ctcctacttcttggccctggtgtttcccctgtactggggcatataaagtt
tgtgagaccaaggggcctctcttcccaatgatggccaattaggccatctt
ctgctacatatgcagctagagacacaagctctgggggtactggttagttc
atattgttgttccacctatagggctgaagaccccttcagctccttgggta
ttttctctagctcctccattgggggccctgtgatccatccaata
gaattcaatgaccatcctctgccttatgagaagaaaactatgattgatag
ttctccaaagagtctcatcatagaacctgagaggtggtagggaattctct
tgaagaaaaaaaagatacaattgccaggagaatgcacccaggatgtaaga
agctaaacacagcagatatatacattgcttgctaattgtaaagattgttg
gggaaacagaatagtagatatggcatggctagaacactatgctgaagaac
aagggattttgttattggtatttccttctcttaagaaaaacacaagagac
aacccagatacatcaaatgtggaacttgaaaaataacaataacactattt
tgtgtcgtattccaagaagggtggatgaatatgcttctgtaaattgggtt
tccatgaagaaaggcaacccatcccatttgaatcacagatagaaccatga
ctgtctctcttatttcttcttggagccatgtctacttgggaagctgacca
atgtaggcagagattagtagcttagaatgagttgttcttgggagacattt
ggacaagctagtagaatagtgattgatccacagaaaagtgctcaaaagca
cacaagagtctacctcaaaatctctcttcaaatgagcaggaaattagtaa
atggtgatggtttgacagccacatgaagagggcaagggtaatctaaagaa
ggtactttctaccctcttccagtcagtgtatcaagcggaaaaattaaaac
ccagtaccagagctttggatttttaaaagaataggttgtaagtgaagttg
cttagaaaggaaatttaaaagtgttaaaaaaaaaaaaagcctcatgaaga
aaaactgagcagcccaaacaaatctcgtttgtggaataagtccatctcat
ggctggattgttccctgtccctgttctcctgtcatgggtttgattagcat
attgcaagtttgccccatgaatctcttacctcattataaaaatgacacat
cacatagctgatttgcctactttgtggttttcttctcgtcctctccacac
tttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25457747_25458197
seq2: B6Ng01-315L07.b_48_497

seq1  GAATTCACTGAAGCATATGGACTTCAAATAAAAAAAATATTTCTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAAGCATATGGACTTCAAATAAAAAAAATATTTCTTTTTTT  50

seq1  TTTTTTTTATTCAATATATGTGGGACTTTATTTGCTGAGGTTTTTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTTTTTATTCAATATATGTGGGACTTTATTTGCTGAGGTTTTTTTTC-  99

seq1  TTTTTTTTTCCCAATTTTTTCAATTAGGTATTTACTTCATTTATATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCCAATTTTTTCAATTAGGTATTTACTTCATTTATATTTCA  149

seq1  AATGCTATCCTGAAAGACCCCTATATTGCCCCCCTCCCCCACTCCCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATCCTGAAAGACCCCTATATTGCCCCCCTCCCCCACTCCCCTAC  199

seq1  CCACCCACTCCTACTTCTTGGCCCTGGTGTTTCCCCTGTACTGGGGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTCCTACTTCTTGGCCCTGGTGTTTCCCCTGTACTGGGGCATA  249

seq1  TAAAGTTTGTGAGACCAAGGGGCCTCTCTTCCCAATGATGGCCAATTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTGTGAGACCAAGGGGCCTCTCTTCCCAATGATGGCCAATTAGG  299

seq1  CCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTGGGGGTACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTGGGGGTACTGG  349

seq1  TTAGTTCATATTGTTGTTCCACCTATAGGGCTGAAGACCCCTTCAGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCATATTGTTGTTCCACCTATAGGGCTGAAGACCCCTTCAGCTCC  399

seq1  TTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAAT  449

seq1  A  451
      |
seq2  A  450

seq1: chr6_25595351_25596422
seq2: B6Ng01-315L07.g_68_1121 (reverse)

seq1  AAAAGTGTGGAGAAGAACAGAAGAAAGAAAAACCCACAAAGTAGCCAAAA  50
      ||||||||||||| ||  |||||      ||| ||||||||||| |||| 
seq2  AAAAGTGTGGAGAGGACGAGAAG------AAAACCACAAAGTAGGCAAA-  43

seq1  TCCAGCTATGGTGGAATGTGTTCATTTTTTATTAATGAGGTAAGGAGATT  100
        ||||||| |||  ||||| ||||||||   ||||||||||| ||||||
seq2  -TCAGCTAT-GTG--ATGTG-TCATTTTT--ATAATGAGGTAA-GAGATT  85

seq1  CATGGGGCAAAACTTGCAATATGCTAATCAAAACCCATGACAGGAGAACA  150
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  CATGGGGC-AAACTTGCAATATGCTAATC-AAACCCATGACAGGAGAACA  133

seq1  GGGACAGGGAACAATCCAGCCATGAGATGGACTTTATTCCACAAACGAGA  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGACAGGGAACAATCCAGCCATGAGATGGAC-TTATTCCACAAACGAGA  182

seq1  TTTGTTTGGCCTGCTCAGTTTTTCTTCATGAGGCTTTTTTTTTTTTTAAC  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGGGCTGCTCAGTTTTTCTTCATGAGGCTTTTTTTTTTTTTAAC  232

seq1  ACTTTTAAATTTCCTTTCTAAGCAACTTCACTTACAACCTATTCTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAAATTTCCTTTCTAAGCAACTTCACTTACAACCTATTCTTTTAA  282

seq1  AAATCCAAAGCTCTGGTACTGGGTTTTAATTTTTCCGCTTGATACACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAAGCTCTGGTACTGGGTTTTAATTTTTCCGCTTGATACACTGA  332

seq1  CTGGAAGAGGGTAGAAAGTACCTTCTTTAGATTACCCTTGCCCTCTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGGGTAGAAAGTACCTTCTTTAGATTACCCTTGCCCTCTTCAT  382

seq1  GTGGCTGTCAAACCATCACCATTTACTAATTTCCTGCTCATTTGAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGTCAAACCATCACCATTTACTAATTTCCTGCTCATTTGAAGAGA  432

seq1  GATTTTGAGGTAGACTCTTGTGTGCTTTTGAGCACTTTTCTGTGGATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGAGGTAGACTCTTGTGTGCTTTTGAGCACTTTTCTGTGGATCAA  482

seq1  TCACTATTCTACTAGCTTGTCCAAATGTCTCCCAAGAACAACTCATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTCTACTAGCTTGTCCAAATGTCTCCCAAGAACAACTCATTCTA  532

seq1  AGCTACTAATCTCTGCCTACATTGGTCAGCTTCCCAAGTAGACATGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTAATCTCTGCCTACATTGGTCAGCTTCCCAAGTAGACATGGCTC  582

seq1  CAAGAAGAAATAAGAGAGACAGTCATGGTTCTATCTGTGATTCAAATGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGAAATAAGAGAGACAGTCATGGTTCTATCTGTGATTCAAATGGG  632

seq1  ATGGGTTGCCTTTCTTCATGGAAACCCAATTTACAGAAGCATATTCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTGCCTTTCTTCATGGAAACCCAATTTACAGAAGCATATTCATCC  682

seq1  ACCCTTCTTGGAATACGACACAAAATAGTGTTATTGTTATTTTTCAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTTGGAATACGACACAAAATAGTGTTATTGTTATTTTTCAAGTT  732

seq1  CCACATTTGATGTATCTGGGTTGTCTCTTGTGTTTTTCTTAAGAGAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGATGTATCTGGGTTGTCTCTTGTGTTTTTCTTAAGAGAAGGA  782

seq1  AATACCAATAACAAAATCCCTTGTTCTTCAGCATAGTGTTCTAGCCATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAATAACAAAATCCCTTGTTCTTCAGCATAGTGTTCTAGCCATGC  832

seq1  CATATCTACTATTCTGTTTCCCCAACAATCTTTACAATTAGCAAGCAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTACTATTCTGTTTCCCCAACAATCTTTACAATTAGCAAGCAATG  882

seq1  TATATATCTGCTGTGTTTAGCTTCTTACATCCTGGGTGCATTCTCCTGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCTGCTGTGTTTAGCTTCTTACATCCTGGGTGCATTCTCCTGGC  932

seq1  AATTGTATCTTTTTTTTCTTCAAGAGAATTCCCTACCACCTCTCAGGTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATCTTTTTTTTCTTCAAGAGAATTCCCTACCACCTCTCAGGTTC  982

seq1  TATGATGAGACTCTTTGGAGAACTATCAATCATAGTTTTCTTCTCATAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGAGACTCTTTGGAGAACTATCAATCATAGTTTTCTTCTCATAAG  1032

seq1  GCAGAGGATGGTCATTGAATTC  1072
      ||||||||||||||||||||||
seq2  GCAGAGGATGGTCATTGAATTC  1054