BAC Information

Click to search

BAC

Clone NameB6Ng01-317M13
Chromosome6 (Build37)
Map Location 129,122,221 - 129,122,784
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1
Downstream geneClec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317M13.bB6Ng01-317M13.g
ACCGA107843GA107844
length1,0291,087
definitionB6Ng01-317M13.b B6Ng01-317M13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagaatggcattaataaggtaaaagctaccaaacactcacag
aacaaagtcattctagtgagaagggtgggctgattccacgacaggtttca
aataggcagttaaggagactaggccttaatctgtttccaagaactggacg
attccaggaaagtccaggcctcagaagctgccctgccacctggtctgagg
caaggacaatgggtcagcagcagtttccagacctccctagtggttttcca
gcacccacacccaggtaatagaatgtccttagagatagatccaacacatt
agcatagaagtcatctaccctggaacaccctaatgtgctttaactcagga
ctgcaagctcacttggttgtgtctctatcttggtgatgggaaaccccagc
atgctggatttcttgcagaataaaacactccttgtgtttacatgcaattt
gagtcctttggtgaatcatggacctatacactagttttctttctgtagta
aacaccatgaccaaaagcaacctgggtaggaaaaggtttatttagcttgt
gtattcaaatccaggccattaatgaggcaagcaaaggttggaactaaacc
tgcatgcaggaattgaattagaaaacatggaggagtgctgctttactgac
ttgctccccgtggtttgctcagtgttctttcctatataacccaagatcat
ctgcttaagtgtggcactgcctcaaatgggctgtactctcctacaattat
catcaatcaagaaactgttctacagatttgcgtataagtcaatctgatgg
agacattttctcagattaggtttcctcttcccagatgacaaaacccaagc
aggacaaaggtgttgtgcaataatgtgcaacccaatagtgttgactcact
tgaatatacatgcaatatttcccttttacctcctcaccccaacagtcaca
tggtggagcacagatggcctgcagcctgctgtgaaacccaggcttgcctg
aactcatggtaacctcttgtgcctcatca
gaattccccttaaagagatagtccctctggctatctatcccttgcttcag
ggaagatgagtggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgtgttgtgtgtttgacacatgtgttaggtacagagtgtgcgggcc
cgcacttttgccatagtagcgtaggcttttgctgcagtggaggcgggaca
atctcctcagattcggtttgctgctctaaaagaaattatgctgcgttatg
ccatgggttgcgaggctaagcactgcacagaggatagcttgctgttggca
tcctgtggaaggcatgtctgattgcataaaggttcagtgtcctagttccc
ttcccccaggaaaaacgacatgggagttggccaagacctctctgggtgat
gagcccaagggatggttttgtgtagggcccctatgcttgcacactgggga
tcagacctctaccttcacccatgagacttgcttgcagcaattaagatctg
gccatagataaatcaacatcctggccttttgatgcacctgccgcaagcaa
aacacaatctccccaggtgtggcttggcatgatagagaggtagtcagtga
taagactccctgggcatgtcaccaacctaagacagggatcaaaccaatgc
tgtttgtctcccaaggacgggtaaggggcatggctgcggggggctatcta
cagacattctctctaccaaaaaagaaaaaagggggagatgtgaggagcgg
gtgtggcggcagtcccaaaggctcagggactgcagctaagtcttatgact
tgcacctgacttcctcacctgaatataagccacaaccatcgtgagagctg
cgcaggtataccaggatactggtgaatccattttgatggagatatgcccc
tgctgccctgaatagctgaagctgcgtaacctggtgaggtggccgtgacc
tgcttgtgctgtggatggaaacctgaaagtataaagatgtgagaaggccc
agggtctcgggggaagtatataaacaaggaagagtattaaaccaagggag
aatttaactcgacggaagatattaacaagggagcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129122221_129122784
seq2: B6Ng01-317M13.b_51_614 (reverse)

seq1  CTGGATTTGAATACACAAGCTAAATAAACCTTTTCCTACCCAGGTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTGAATACACAAGCTAAATAAACCTTTTCCTACCCAGGTTGCTT  50

seq1  TTGGTCATGGTGTTTACTACAGAAAGAAAACTAGTGTATAGGTCCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGGTGTTTACTACAGAAAGAAAACTAGTGTATAGGTCCATGAT  100

seq1  TCACCAAAGGACTCAAATTGCATGTAAACACAAGGAGTGTTTTATTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAAGGACTCAAATTGCATGTAAACACAAGGAGTGTTTTATTCTGC  150

seq1  AAGAAATCCAGCATGCTGGGGTTTCCCATCACCAAGATAGAGACACAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCCAGCATGCTGGGGTTTCCCATCACCAAGATAGAGACACAACC  200

seq1  AAGTGAGCTTGCAGTCCTGAGTTAAAGCACATTAGGGTGTTCCAGGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCTTGCAGTCCTGAGTTAAAGCACATTAGGGTGTTCCAGGGTAG  250

seq1  ATGACTTCTATGCTAATGTGTTGGATCTATCTCTAAGGACATTCTATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTCTATGCTAATGTGTTGGATCTATCTCTAAGGACATTCTATTAC  300

seq1  CTGGGTGTGGGTGCTGGAAAACCACTAGGGAGGTCTGGAAACTGCTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTGGGTGCTGGAAAACCACTAGGGAGGTCTGGAAACTGCTGCTG  350

seq1  ACCCATTGTCCTTGCCTCAGACCAGGTGGCAGGGCAGCTTCTGAGGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTGTCCTTGCCTCAGACCAGGTGGCAGGGCAGCTTCTGAGGCCTG  400

seq1  GACTTTCCTGGAATCGTCCAGTTCTTGGAAACAGATTAAGGCCTAGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCCTGGAATCGTCCAGTTCTTGGAAACAGATTAAGGCCTAGTCTC  450

seq1  CTTAACTGCCTATTTGAAACCTGTCGTGGAATCAGCCCACCCTTCTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTGCCTATTTGAAACCTGTCGTGGAATCAGCCCACCCTTCTCACT  500

seq1  AGAATGACTTTGTTCTGTGAGTGTTTGGTAGCTTTTACCTTATTAATGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACTTTGTTCTGTGAGTGTTTGGTAGCTTTTACCTTATTAATGCC  550

seq1  ATTCTTATGAATTC  564
      ||||||||||||||
seq2  ATTCTTATGAATTC  564