BAC Information

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BAC

Clone NameB6Ng01-317O01
Chromosome6 (Build37)
Map Location 10,418,075 - 10,419,189
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317O01.bB6Ng01-317O01.g
ACCGA107909GA107910
length1,1111,178
definitionB6Ng01-317O01.b B6Ng01-317O01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttggttactgactaaagatctctaatgtcaaaaatcagtgg
taggagccactgtttatactaccagccttggaaaaaggagaaacaatact
gtgtcaggctgagaatggcattgattacattgatttcatacatacagtga
cacggtatctcacttacataggtctccttcctcactgagaccatgaggaa
tactagaaagttgttttgtatgatgaatgtaaaatacttacagcttcaat
attctacatatgatttgacaatagacatacactctttgaagcctgctaga
ctacctggtgttataagaatttattacttattacttagagaagaaaaagt
atacaaatatatacatacacacatatatgcatttatatatgacattcatg
catatattcattcatatagcattgttatgctttttatatacatacatatg
gttgtatgtaagagagaaaggagagagaaagagagagagagacttaacaa
aagaaattacattttaaatctatattttattttgagatcaaaaactccct
aggaactcactgtacagctccaactagactggatatcaatatccttcctc
ctccatttcccatctacttgtaacacatttgtgaattatcatgccttgaa
tcaagcatggaattttagtagttgaagagaagattttctttcattaatga
tacagtcagggattttaattaatttactaaccaaggtttacatttttagt
gtattttatgtgagtctatcataactatgagcatacttcctatgccatga
aatgcaaataatgcagtaacttttcaccatagaattttacacatcagcaa
tagcttaaatgtaattgtaacaaaacagaagagaatttttactaacaggt
aaggatttagttttccactcctcagttatatttgtgactctattctcatg
gaagttactaagtcttatatttttctccttttgttactgggcttttgagt
gagtgtttgaataggtcaagacccacaagcttgcacaatagcacatatgc
tagcttagagcaagtgcagtgtactgtatcatgacagtgtgaaattgatg
caagcatctga

gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagataccccaactggtaagaaggacacatgctccactat
gttcattgcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggatatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagttacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagaagaaagtactcaagagctaaagggatctgcacctatt
agttgatcacatatgactaccagtaccccgagctctgacctctagctgca
tatattatcaaatatgctagtcgcatcactgaagagaggccaattggaca
gctaactttaatgccccagtaatgaacgccaggccaaaaggaattggctg
gtaatggagttgggcccgtctctacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10418075_10419189
seq2: B6Ng01-317O01.b_46_1156

seq1  GAATTCACTTTGGTTACTGACTAAAGATCTCTAATGTCAAAAATCAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGGTTACTGACTAAAGATCTCTAATGTCAAAAATCAGTGG  50

seq1  TAGGAGCCACTGTTTATACTACCAGCCTTGGAAAAAGGAGAAACAATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCACTGTTTATACTACCAGCCTTGGAAAAAGGAGAAACAATACT  100

seq1  GTGTCAGGCTGAGAATGGCATTGATTACATTGATTTCATACATACAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGGCTGAGAATGGCATTGATTACATTGATTTCATACATACAGTGA  150

seq1  CACGGTATCTCACTTACATAGGTCTCCTTCCTCACTGAGACCATGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTATCTCACTTACATAGGTCTCCTTCCTCACTGAGACCATGAGGAA  200

seq1  TACTAGAAAGTTGTTTTGTATGATGAATGTAAAATACTTACAGCTTCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAAAGTTGTTTTGTATGATGAATGTAAAATACTTACAGCTTCAAT  250

seq1  ATTCTACATATGATTTGACAATAGACATACACTCTTTGAAGCCTGCTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACATATGATTTGACAATAGACATACACTCTTTGAAGCCTGCTAGA  300

seq1  CTACCTGGTGTTATAAGAATTTATTACTTATTACTTAGAGAAGAAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGGTGTTATAAGAATTTATTACTTATTACTTAGAGAAGAAAAAGT  350

seq1  ATACAAATATATACATACACACATATATGCATTTATATATGACATTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATATATACATACACACATATATGCATTTATATATGACATTCATG  400

seq1  CATATATTCATTCATATAGCATTGTTATGCTTTTTATATACATACATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTCATTCATATAGCATTGTTATGCTTTTTATATACATACATATG  450

seq1  GTTGTATGTAAGAGAGAAAGGAGAGAGAAAGAGAGAGAGAGACTTAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATGTAAGAGAGAAAGGAGAGAGAAAGAGAGAGAGAGACTTAACAA  500

seq1  AAGAAATTACATTTTAAATCTATATTTTATTTTGAGATCAAAAACTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTACATTTTAAATCTATATTTTATTTTGAGATCAAAAACTCCCT  550

seq1  AGGAACTCACTGTACAGCTCCAACTAGACTGGATATCAATATCCTTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCACTGTACAGCTCCAACTAGACTGGATATCAATATCCTTCCTC  600

seq1  CTCCATTTCCCATCTACTTGTAACACATTTGTGAATTATCATGCCTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTCCCATCTACTTGTAACACATTTGTGAATTATCATGCCTTGAA  650

seq1  TCAAGCATGGAATTTTAGTAGTTGAAGAGAAGATTTTCTTTCATTAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATGGAATTTTAGTAGTTGAAGAGAAGATTTTCTTTCATTAATGA  700

seq1  TACAGTCAGGGATTTTAATTAATTTACTAACCAAGGTTTACATTTTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCAGGGATTTTAATTAATTTACTAACCAAGGTTTACATTTTTAGT  750

seq1  GTATTTTATGTGAGTCTATCATAACTATGAGCATACTTCCTATGCCATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTATGTGAGTCTATCATAACTATGAGCATACTTCCTATGCCATGA  800

seq1  AATGCAAATAATGCAGTAACTTTTCACCATAGAATTTTACACATCAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAATAATGCAGTAACTTTTCACCATAGAATTTTACACATCAGCAA  850

seq1  TAGCTTAAATGTAATTGTAACAAAACAGAAGAGAATTTTTACTAACAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTAAATGTAATTGTAACAAAACAGAAGAGAATTTTTACTAACAGGT  900

seq1  AAGGATTTAGTTTTCCACTCCTCAGTTATATTTGTGACTCTATTCTCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTAGTTTTCCACTCCTCAGTTATATTTGTGACTCTATTCTCATG  950

seq1  GAAGTTACTAAGTCTTATATTTTTCTCCTTTTGTTACT-GGCTTTTGAGT  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAGTTACTAAGTCTTATATTTTTCTCCTTTTGTTACTGGGCTTTTGAGT  1000

seq1  GAGTGTTTG-ATAGGGTCAGACCCAC-AGCTTGCAC-ATAGCACCAATAT  1046
      ||||||||| |||||   |||||||| ||||||||| |||||||  ||||
seq2  GAGTGTTTGAATAGGTCAAGACCCACAAGCTTGCACAATAGCAC--ATAT  1048

seq1  GCTAGCTTTAAGGAAGCAAGTGCAGTGTAGTGTATCATGACAGTGTGAAA  1096
      ||||||||  ||  ||||||||||||||| ||||||||||||||||||||
seq2  GCTAGCTT--AG--AGCAAGTGCAGTGTACTGTATCATGACAGTGTGAAA  1094

seq1  TGGAATGCAAGGCATCTGA  1115
      | | |||||| ||||||||
seq2  TTG-ATGCAA-GCATCTGA  1111


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