BAC Information

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BAC

Clone NameB6Ng01-318K11
Chromosome6 (Build37)
Map Location 19,065,456 - 19,065,925
singlet/doubletsinglet
Overlap geneLOC626180
Upstream geneLOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneEif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318K11.bB6Ng01-318K11.g
ACCGA108484GA108485
length617464
definitionB6Ng01-318K11.b B6Ng01-318K11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagtatgtactcattgataagtggatattagcccagaaactta
caatacccaagatataagatacaattttctaaacacatgaaactaaaaaa
aaaaaaaaccaagaccaaactgtggacactttgccccttcttagaattgg
gaacaaaacactcatggaaggagttacagagacaaagtttggagctgaga
caaaaggatggaccatctagagactgccatacccagggatccatcctata
atcagcttccaaacgctgacaccattgcatacactagcaagattttgcgt
aaaggacccagatatagctgtctcttgtgagactatgctggggcctagca
aacacagaagtggatgctcacagtcagctattggatggatcacagggccc
ccaaaggctgagctagagaaagtaatcaaggagctaaagggatctgtaac
cctataggttgaacaacaatatgaactaagcagtaccccccccccacccc
cccggagatcgtgtctctagctgcatatgtatcagaagttggcctagtcg
gccaccagtggtcatacaaactttatatgcctcagtacaggggaatgaca
gggccaagaagtgggag

caggacaaccgggactacacagagaaaccctgtcctaaaaaaaagaaaga
aagaaagaaagagagagagagagagagagagagagagagagagagagaga
gagagagaaagaaaagaatgctgacactaaataaaacctgattaaatgtg
tatataaaatatttataatcatagccgtaaatttgacattttcttacaat
ttacaaaacagatgggacaaagacaaaaggattgattaagtcttacaaag
cattttagttagtaaatacacaaaaataaaaagtttaaaatcccttaaag
actgagccaccaacgacagagcatacatgggctgctctgtggcccctgac
acataggtaacagacatttgccttatctgacctcagtgggagaggatgag
cctaattctgtagacttgatacctcaggaaagggagtcaaatgatggtgg
gggtgggagtgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19065456_19065925
seq2: B6Ng01-318K11.g_66_535 (reverse)

seq1  ACTCACTCCCACCCCCACCATCATTTGACTCCCTTTCCTGAGGTATCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCCCACCCCCACCATCATTTGACTCCCTTTCCTGAGGTATCAAG  50

seq1  TCTACAGAATTAGGCTCATCCTCTCCCACTGAGGTCAGATAAGGCAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAATTAGGCTCATCCTCTCCCACTGAGGTCAGATAAGGCAAATG  100

seq1  TCTGTTACCTATGTGTCAGGGGCCACAGAGCAGCCCATGTATGCTCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTACCTATGTGTCAGGGGCCACAGAGCAGCCCATGTATGCTCTGTC  150

seq1  GTTGGTGGCTCAGTCTTTAAGGGATTTTAAACTTTTTATTTTTGTGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGGCTCAGTCTTTAAGGGATTTTAAACTTTTTATTTTTGTGTATT  200

seq1  TACTAACTAAAATGCTTTGTAAGACTTAATCAATCCTTTTGTCTTTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACTAAAATGCTTTGTAAGACTTAATCAATCCTTTTGTCTTTGTCC  250

seq1  CATCTGTTTTGTAAATTGTAAGAAAATGTCAAATTTACGGCTATGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTTTGTAAATTGTAAGAAAATGTCAAATTTACGGCTATGATTAT  300

seq1  AAATATTTTATATACACATTTAATCAGGTTTTATTTAGTGTCAGCATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTATATACACATTTAATCAGGTTTTATTTAGTGTCAGCATTCT  350

seq1  TTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  400

seq1  TCTCTTTCTTTCTTTCTTTCTTTTTTTTAGGACAGGGTTTCTCTGTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTTCTTTCTTTCTTTTTTTTAGGACAGGGTTTCTCTGTGTAG  450

seq1  TCCCGGTTGTCCTGGAATTC  470
      ||||||||||||||||||||
seq2  TCCCGGTTGTCCTGGAATTC  470


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